RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 FNDC8Q8TC99 324 aa13.6□□□□□ -0.23
SCAF11-204ENST00000395454 PAQR8Q8TEZ7 354 aa13.6□□□□□ -0.23
SCAF11-204ENST00000395454 SMPDL3BQ92485 455 aa13.6□□□□□ -0.23
SCAF11-204ENST00000395454 RASD2Q96D21 266 aa13.6□□□□□ -0.23
SCAF11-204ENST00000395454 FRMD6Q96NE9 622 aa13.6□□□□□ -0.23
SCAF11-204ENST00000395454 SNX18Q96RF0 628 aa13.6□□□□□ -0.23
SCAF11-204ENST00000395454 NMNAT3Q96T66 252 aa13.6□□□□□ -0.23
SCAF11-204ENST00000395454 CNN2Q99439 309 aaKnown RBP13.6□□□□□ -0.23
SCAF11-204ENST00000395454 ISG20L2Q9H9L3 353 aaKnown RBP13.6□□□□□ -0.23
SCAF11-204ENST00000395454 GALNT9Q9HCQ5 603 aa13.6□□□□□ -0.23
SCAF11-204ENST00000395454 KLHL1Q9NR64 748 aa13.6□□□□□ -0.23
SCAF11-204ENST00000395454 TP53TG5Q9Y2B4 290 aa13.6□□□□□ -0.23
SCAF11-204ENST00000395454 TEX13CA0A0J9YWL9 993 aa13.59□□□□□ -0.23
SCAF11-204ENST00000395454 FTCDNL1E5RQL4 147 aa13.59□□□□□ -0.23
SCAF11-204ENST00000395454 BLOC1S5-TXNDC5H3BN57 136 aa13.59□□□□□ -0.23
SCAF11-204ENST00000395454 CDK2AP1O14519 115 aa13.59□□□□□ -0.23
SCAF11-204ENST00000395454 NUDT14O95848 222 aa13.59□□□□□ -0.23
SCAF11-204ENST00000395454 TFP02787 698 aa13.59□□□□□ -0.23
SCAF11-204ENST00000395454 P04436 131 aa13.59□□□□□ -0.23
SCAF11-204ENST00000395454 GYPBP06028 91 aa13.59□□□□□ -0.23
SCAF11-204ENST00000395454 OR2T7P0C7T2 308 aa13.59□□□□□ -0.23
SCAF11-204ENST00000395454 RPS19P39019 145 aaKnown RBP13.59□□□□□ -0.23
SCAF11-204ENST00000395454 RPS5P46782 204 aaKnown RBP13.59□□□□□ -0.23
SCAF11-204ENST00000395454 TNFSF10P50591 281 aa13.59□□□□□ -0.23
SCAF11-204ENST00000395454 FABP5Q01469 135 aa13.59□□□□□ -0.23
SCAF11-204ENST00000395454 PON3Q15166 354 aa13.59□□□□□ -0.23
SCAF11-204ENST00000395454 C1orf140Q5VVS0 124 aa13.59□□□□□ -0.23
SCAF11-204ENST00000395454 MAMDC2Q7Z304 686 aaPredicted RBP13.59□□□□□ -0.23
SCAF11-204ENST00000395454 EGFL6Q8IUX8 553 aa13.59□□□□□ -0.23
SCAF11-204ENST00000395454 SYS1Q8N2H4 156 aa13.59□□□□□ -0.23
SCAF11-204ENST00000395454 ZADH2Q8N4Q0 377 aa13.59□□□□□ -0.23
SCAF11-204ENST00000395454 C10orf53Q8N6V4 93 aa13.59□□□□□ -0.23
SCAF11-204ENST00000395454 ATP6V1C2Q8NEY4 427 aa13.59□□□□□ -0.23
SCAF11-204ENST00000395454 OR10H4Q8NGA5 316 aa13.59□□□□□ -0.23
SCAF11-204ENST00000395454 OR2T27Q8NH04 317 aa13.59□□□□□ -0.23
SCAF11-204ENST00000395454 SLC25A46Q96AG3 418 aa13.59□□□□□ -0.23
SCAF11-204ENST00000395454 Q96M85 177 aa13.59□□□□□ -0.23
SCAF11-204ENST00000395454 EXOSC4Q9NPD3 245 aaKnown RBP13.59□□□□□ -0.23
SCAF11-204ENST00000395454 TRIM36Q9NQ86 728 aa13.59□□□□□ -0.23
SCAF11-204ENST00000395454 ZNF71Q9NQZ8 489 aaPredicted RBP13.59□□□□□ -0.23
SCAF11-204ENST00000395454 TAS2R5Q9NYW4 299 aa13.59□□□□□ -0.23
SCAF11-204ENST00000395454 PEX16Q9Y5Y5 336 aa13.59□□□□□ -0.23
SCAF11-204ENST00000395454 IQCMA0A1B0GVH7 501 aa13.58□□□□□ -0.23
SCAF11-204ENST00000395454 G3V3Y1 287 aa13.58□□□□□ -0.23
SCAF11-204ENST00000395454 J3QRK9 145 aa13.58□□□□□ -0.23
SCAF11-204ENST00000395454 ZNF208O43345 1280 aa13.58□□□□□ -0.23
SCAF11-204ENST00000395454 GLCEO94923 617 aa13.58□□□□□ -0.23
SCAF11-204ENST00000395454 IGHMP01871 453 aa13.58□□□□□ -0.23
SCAF11-204ENST00000395454 MT-ND5P03915 603 aa13.58□□□□□ -0.23
SCAF11-204ENST00000395454 HLA-DPB1P04440 258 aa13.58□□□□□ -0.23
SCAF11-204ENST00000395454 ZNF12P17014 697 aa13.58□□□□□ -0.23
SCAF11-204ENST00000395454 CD40LGP29965 261 aa13.58□□□□□ -0.23
SCAF11-204ENST00000395454 APOBEC1P41238 236 aaKnown RBP13.58□□□□□ -0.23
SCAF11-204ENST00000395454 CASP3P42574 277 aa13.58□□□□□ -0.23
SCAF11-204ENST00000395454 CDKN2AP42771 156 aaKnown RBP13.58□□□□□ -0.23
SCAF11-204ENST00000395454 TAS2R43P59537 309 aa13.58□□□□□ -0.23
SCAF11-204ENST00000395454 CTXN1P60606 82 aa13.58□□□□□ -0.23
SCAF11-204ENST00000395454 GPR85P60893 370 aa13.58□□□□□ -0.23
SCAF11-204ENST00000395454 SNTA1Q13424 505 aa13.58□□□□□ -0.23
SCAF11-204ENST00000395454 C1QL3Q5VWW1 255 aa13.58□□□□□ -0.23
SCAF11-204ENST00000395454 LSM14AQ8ND56 463 aaKnown RBP13.58□□□□□ -0.23
SCAF11-204ENST00000395454 ZPLD1Q8TCW7 415 aa13.58□□□□□ -0.23
SCAF11-204ENST00000395454 KCTD7Q96MP8 289 aa13.58□□□□□ -0.23
SCAF11-204ENST00000395454 TSPAN32Q96QS1 320 aa13.58□□□□□ -0.23
SCAF11-204ENST00000395454 HES7Q9BYE0 225 aa13.58□□□□□ -0.23
SCAF11-204ENST00000395454 BARHL1Q9BZE3 327 aa13.58□□□□□ -0.23
SCAF11-204ENST00000395454 SH2D2AQ9NP31 389 aa13.58□□□□□ -0.23
SCAF11-204ENST00000395454 SACM1LQ9NTJ5 587 aa13.58□□□□□ -0.23
SCAF11-204ENST00000395454 MOKQ9UQ07 419 aa13.58□□□□□ -0.23
SCAF11-204ENST00000395454 PCDHGB7Q9Y5F8 929 aa13.58□□□□□ -0.23
SCAF11-204ENST00000395454 WIF1Q9Y5W5 379 aa13.58□□□□□ -0.23
SCAF11-204ENST00000395454 A0A1W2PQL4 384 aaPredicted RBP13.58□□□□□ -0.24
SCAF11-204ENST00000395454 C2orf72A6NCS6 295 aa13.58□□□□□ -0.24
SCAF11-204ENST00000395454 PLPP2O43688 288 aa13.58□□□□□ -0.24
SCAF11-204ENST00000395454 OR2T1O43869 369 aa13.58□□□□□ -0.24
SCAF11-204ENST00000395454 HIST1H2ABP04908 130 aa13.58□□□□□ -0.24
SCAF11-204ENST00000395454 CD46P15529 392 aa13.58□□□□□ -0.24
SCAF11-204ENST00000395454 HSF2Q03933 536 aa13.58□□□□□ -0.24
SCAF11-204ENST00000395454 CDONQ4KMG0 1287 aa13.58□□□□□ -0.24
SCAF11-204ENST00000395454 MESTQ5EB52 335 aa13.58□□□□□ -0.24
SCAF11-204ENST00000395454 IGFL3Q6UXB1 125 aa13.58□□□□□ -0.24
SCAF11-204ENST00000395454 ASB18Q6ZVZ8 466 aa13.58□□□□□ -0.24
SCAF11-204ENST00000395454 HIST3H2AQ7L7L0 130 aa13.58□□□□□ -0.24
SCAF11-204ENST00000395454 BTLAQ7Z6A9 289 aa13.58□□□□□ -0.24
SCAF11-204ENST00000395454 KLBQ86Z14 1044 aa13.58□□□□□ -0.24
SCAF11-204ENST00000395454 MDS2Q8NDY4 140 aa13.58□□□□□ -0.24
SCAF11-204ENST00000395454 OR5J2Q8NH18 312 aa13.58□□□□□ -0.24
SCAF11-204ENST00000395454 ZNRF4Q8WWF5 429 aa13.58□□□□□ -0.24
SCAF11-204ENST00000395454 HIST1H2ACQ93077 130 aa13.58□□□□□ -0.24
SCAF11-204ENST00000395454 C5orf34Q96MH7 638 aa13.58□□□□□ -0.24
SCAF11-204ENST00000395454 TM9SF2Q99805 663 aa13.58□□□□□ -0.24
SCAF11-204ENST00000395454 SDHAF3Q9NRP4 125 aa13.58□□□□□ -0.24
SCAF11-204ENST00000395454 MRPL39Q9NYK5 338 aaKnown RBP13.58□□□□□ -0.24
SCAF11-204ENST00000395454 CELP19835 753 aa13.57□□□□□ -0.24
SCAF11-204ENST00000395454 PPP5CP53041 499 aa13.57□□□□□ -0.24
SCAF11-204ENST00000395454 SLC16A1P53985 500 aa13.57□□□□□ -0.24
SCAF11-204ENST00000395454 ACTA2P62736 377 aa13.57□□□□□ -0.24
SCAF11-204ENST00000395454 ACTG2P63267 376 aa13.57□□□□□ -0.24
SCAF11-204ENST00000395454 DBPQ10586 325 aaPredicted RBP13.57□□□□□ -0.24
SCAF11-204ENST00000395454 KRR1Q13601 381 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms