RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 IRF4Q15306 451 aa8□□□□□ -1.13
SMARCA1-203ENST00000371123 OR7A5Q15622 319 aa8□□□□□ -1.13
SMARCA1-203ENST00000371123 EIF2S3LQ2VIR3 472 aaKnown RBP8□□□□□ -1.13
SMARCA1-203ENST00000371123 WDR88Q6ZMY6 472 aa8□□□□□ -1.13
SMARCA1-203ENST00000371123 TMPPEQ6ZT21 453 aa8□□□□□ -1.13
SMARCA1-203ENST00000371123 CXXC5Q7LFL8 322 aaKnown RBP8□□□□□ -1.13
SMARCA1-203ENST00000371123 NUP43Q8NFH3 380 aa8□□□□□ -1.13
SMARCA1-203ENST00000371123 OR14A2Q96R54 314 aa8□□□□□ -1.13
SMARCA1-203ENST00000371123 EFCAB11Q9BUY7 163 aa8□□□□□ -1.13
SMARCA1-203ENST00000371123 LMAN2LQ9H0V9 348 aa8□□□□□ -1.13
SMARCA1-203ENST00000371123 SLC23A2Q9UGH3 650 aa8□□□□□ -1.13
SMARCA1-203ENST00000371123 HEATR5BQ9P2D3 2071 aa8□□□□□ -1.13
SMARCA1-203ENST00000371123 DOCK7Q96N67 2140 aa8□□□□□ -1.13
SMARCA1-203ENST00000371123 SOD2P04179 222 aa8□□□□□ -1.13
SMARCA1-203ENST00000371123 IL5P05113 134 aa8□□□□□ -1.13
SMARCA1-203ENST00000371123 COX5BP10606 129 aa8□□□□□ -1.13
SMARCA1-203ENST00000371123 RCC1P18754 421 aaPredicted RBP8□□□□□ -1.13
SMARCA1-203ENST00000371123 DDX6P26196 483 aaKnown RBP eCLIP8□□□□□ -1.134e-6■■□□□ 13.3
SMARCA1-203ENST00000371123 GABRA3P34903 492 aa8□□□□□ -1.13
SMARCA1-203ENST00000371123 NR0B1P51843 470 aaKnown RBP8□□□□□ -1.13
SMARCA1-203ENST00000371123 CBFBQ13951 182 aa8□□□□□ -1.13
SMARCA1-203ENST00000371123 YOD1Q5VVQ6 348 aaPredicted RBP8□□□□□ -1.13
SMARCA1-203ENST00000371123 LIPJQ5W064 366 aa8□□□□□ -1.13
SMARCA1-203ENST00000371123 GRHL2Q6ISB3 625 aa8□□□□□ -1.13
SMARCA1-203ENST00000371123 NXPE4Q6UWF7 544 aa8□□□□□ -1.13
SMARCA1-203ENST00000371123 OOSP2Q86WS3 158 aa8□□□□□ -1.13
SMARCA1-203ENST00000371123 KLHDC8AQ8IYD2 350 aa8□□□□□ -1.13
SMARCA1-203ENST00000371123 CA5BP1Q8WTZ4 195 aa8□□□□□ -1.13
SMARCA1-203ENST00000371123 SLC25A43Q8WUT9 341 aaPredicted RBP8□□□□□ -1.13
SMARCA1-203ENST00000371123 SMPDL3BQ92485 455 aa8□□□□□ -1.13
SMARCA1-203ENST00000371123 ISOC2Q96AB3 205 aa8□□□□□ -1.13
SMARCA1-203ENST00000371123 NEURL3Q96EH8 262 aa8□□□□□ -1.13
SMARCA1-203ENST00000371123 CPNE2Q96FN4 548 aaPredicted RBP8□□□□□ -1.13
SMARCA1-203ENST00000371123 NEU1Q99519 415 aa8□□□□□ -1.13
SMARCA1-203ENST00000371123 SMOC1Q9H4F8 434 aa8□□□□□ -1.13
SMARCA1-203ENST00000371123 LHX9Q9NQ69 397 aa8□□□□□ -1.13
SMARCA1-203ENST00000371123 SLC7A7Q9UM01 511 aa8□□□□□ -1.13
SMARCA1-203ENST00000371123 DIDO1Q9BTC0 2240 aaKnown RBP8□□□□□ -1.13
SMARCA1-203ENST00000371123 RFPL4AA6NLU0 287 aa7.99□□□□□ -1.13
SMARCA1-203ENST00000371123 F5H5P2 479 aa7.99□□□□□ -1.13
SMARCA1-203ENST00000371123 RFPL4AL1F8VTS6 287 aa7.99□□□□□ -1.13
SMARCA1-203ENST00000371123 CD63P08962 238 aa7.99□□□□□ -1.13
SMARCA1-203ENST00000371123 NQO2P16083 231 aa7.99□□□□□ -1.13
SMARCA1-203ENST00000371123 MGMTP16455 207 aa7.99□□□□□ -1.13
SMARCA1-203ENST00000371123 CSNK2A2P19784 350 aaPredicted RBP7.99□□□□□ -1.13
SMARCA1-203ENST00000371123 STARD6P59095 220 aa7.99□□□□□ -1.13
SMARCA1-203ENST00000371123 SSTP61278 116 aa7.99□□□□□ -1.13
SMARCA1-203ENST00000371123 LIN54Q6MZP7 749 aa7.99□□□□□ -1.13
SMARCA1-203ENST00000371123 NIPAL3Q6P499 406 aa7.99□□□□□ -1.13
SMARCA1-203ENST00000371123 UNQ6126/PRO20091Q6UXV3 157 aa7.99□□□□□ -1.13
SMARCA1-203ENST00000371123 THSD4Q6ZMP0 1018 aa7.99□□□□□ -1.13
SMARCA1-203ENST00000371123 ZNF783Q6ZMS7 281 aa7.99□□□□□ -1.13
SMARCA1-203ENST00000371123 ZNF627Q7L945 461 aa7.99□□□□□ -1.13
SMARCA1-203ENST00000371123 SVBPQ8N300 66 aa7.99□□□□□ -1.13
SMARCA1-203ENST00000371123 OR52E2Q8NGJ4 325 aa7.99□□□□□ -1.13
SMARCA1-203ENST00000371123 TMEM255BQ8WV15 326 aa7.99□□□□□ -1.13
SMARCA1-203ENST00000371123 MEGF10Q96KG7 1140 aa7.99□□□□□ -1.13
SMARCA1-203ENST00000371123 NECAB3Q96P71 396 aaPredicted RBP7.99□□□□□ -1.13
SMARCA1-203ENST00000371123 SRMSQ9H3Y6 488 aa7.99□□□□□ -1.13
SMARCA1-203ENST00000371123 C6orf106Q9H6K1 298 aaPredicted RBP7.99□□□□□ -1.13
SMARCA1-203ENST00000371123 TRPV4Q9HBA0 871 aa7.99□□□□□ -1.13
SMARCA1-203ENST00000371123 ZNF346Q9UL40 294 aaKnown RBP7.99□□□□□ -1.13
SMARCA1-203ENST00000371123 CENPVL1A0A0U1RR11 272 aa7.99□□□□□ -1.13
SMARCA1-203ENST00000371123 SNRPGP15A8MWD9 76 aa7.99□□□□□ -1.13
SMARCA1-203ENST00000371123 SULT2B1O00204 365 aa7.99□□□□□ -1.13
SMARCA1-203ENST00000371123 CCSO14618 274 aa7.99□□□□□ -1.13
SMARCA1-203ENST00000371123 PRAF2O60831 178 aa7.99□□□□□ -1.13
SMARCA1-203ENST00000371123 DAOP14920 347 aa7.99□□□□□ -1.13
SMARCA1-203ENST00000371123 NPPBP16860 134 aa7.99□□□□□ -1.13
SMARCA1-203ENST00000371123 IFNGR2P38484 337 aa7.99□□□□□ -1.13
SMARCA1-203ENST00000371123 AGERQ15109 404 aa7.99□□□□□ -1.13
SMARCA1-203ENST00000371123 ELAVL1Q15717 326 aaKnown RBP7.99□□□□□ -1.13
SMARCA1-203ENST00000371123 C4orf46Q504U0 113 aa7.99□□□□□ -1.13
SMARCA1-203ENST00000371123 LIPNQ5VXI9 398 aa7.99□□□□□ -1.13
SMARCA1-203ENST00000371123 SLCO4C1Q6ZQN7 724 aa7.99□□□□□ -1.13
SMARCA1-203ENST00000371123 FAM83HQ6ZRV2 1179 aaPredicted RBP7.99□□□□□ -1.13
SMARCA1-203ENST00000371123 FCRLAQ7L513 359 aa7.99□□□□□ -1.13
SMARCA1-203ENST00000371123 OR4C16Q8NGL9 310 aa7.99□□□□□ -1.13
SMARCA1-203ENST00000371123 TSEN15Q8WW01 171 aaKnown RBP7.99□□□□□ -1.13
SMARCA1-203ENST00000371123 MRGPRFQ96AM1 343 aa7.99□□□□□ -1.13
SMARCA1-203ENST00000371123 PDCD1LG2Q9BQ51 273 aa7.99□□□□□ -1.13
SMARCA1-203ENST00000371123 ZNF629Q9UEG4 869 aaPredicted RBP7.99□□□□□ -1.13
SMARCA1-203ENST00000371123 OR5V1Q9UGF6 321 aa7.99□□□□□ -1.13
SMARCA1-203ENST00000371123 TNFSF18Q9UNG2 199 aa7.99□□□□□ -1.13
SMARCA1-203ENST00000371123 FAM86C2PA6NEL3 165 aa7.99□□□□□ -1.13
SMARCA1-203ENST00000371123 B4DGG1 531 aa7.99□□□□□ -1.13
SMARCA1-203ENST00000371123 LCMT2O60294 686 aaKnown RBP7.99□□□□□ -1.13
SMARCA1-203ENST00000371123 ADH5P11766 374 aa7.99□□□□□ -1.13
SMARCA1-203ENST00000371123 ADRA2CP18825 462 aa7.99□□□□□ -1.13
SMARCA1-203ENST00000371123 UQCRC2P22695 453 aa7.99□□□□□ -1.13
SMARCA1-203ENST00000371123 CDK2P24941 298 aa7.99□□□□□ -1.13
SMARCA1-203ENST00000371123 ACKR3P25106 362 aa7.99□□□□□ -1.13
SMARCA1-203ENST00000371123 S100PP25815 95 aa7.99□□□□□ -1.13
SMARCA1-203ENST00000371123 GDI1P31150 447 aa7.99□□□□□ -1.13
SMARCA1-203ENST00000371123 EFNB2P52799 333 aa7.99□□□□□ -1.13
SMARCA1-203ENST00000371123 ZNF239Q16600 458 aaKnown RBP7.99□□□□□ -1.13
SMARCA1-203ENST00000371123 NKPD1Q17RQ9 610 aa7.99□□□□□ -1.13
SMARCA1-203ENST00000371123 OR52W1Q6IF63 320 aa7.99□□□□□ -1.13
SMARCA1-203ENST00000371123 SLC16A11Q8NCK7 471 aa7.99□□□□□ -1.13
SMARCA1-203ENST00000371123 NR4A3Q92570 626 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms