RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 TBC1D20Q96BZ9 403 aa14.83□□□□□ -0.04
NPHP3-201ENST00000337331 TMPRSS5Q9H3S3 457 aa14.83□□□□□ -0.04
NPHP3-201ENST00000337331 SLC35A3Q9Y2D2 325 aa14.83□□□□□ -0.04
NPHP3-201ENST00000337331 PUS1Q9Y606 427 aaKnown RBP eCLIP14.83□□□□□ -0.04
NPHP3-201ENST00000337331 C17orf105B2RV13 164 aa14.83□□□□□ -0.04
NPHP3-201ENST00000337331 SOCS6O14544 535 aa14.83□□□□□ -0.04
NPHP3-201ENST00000337331 ST8SIA5O15466 376 aa14.83□□□□□ -0.04
NPHP3-201ENST00000337331 RABIFP47224 123 aa14.83□□□□□ -0.04
NPHP3-201ENST00000337331 OR7A5Q15622 319 aa14.83□□□□□ -0.04
NPHP3-201ENST00000337331 SLC25A35Q3KQZ1 300 aa14.83□□□□□ -0.04
NPHP3-201ENST00000337331 MRPL2Q5T653 305 aaKnown RBP14.83□□□□□ -0.04
NPHP3-201ENST00000337331 GLYATL2Q8WU03 294 aa14.83□□□□□ -0.04
NPHP3-201ENST00000337331 ZBTB8AQ96BR9 441 aa14.83□□□□□ -0.04
NPHP3-201ENST00000337331 GDE1Q9NZC3 331 aa14.83□□□□□ -0.04
NPHP3-201ENST00000337331 LINC01387J3KSC0 135 aa14.83□□□□□ -0.04
NPHP3-201ENST00000337331 RNF4P78317 190 aa14.83□□□□□ -0.04
NPHP3-201ENST00000337331 PLEKHN1Q494U1 663 aaPredicted RBP14.83□□□□□ -0.04
NPHP3-201ENST00000337331 FAM69BQ5VUD6 431 aa14.83□□□□□ -0.04
NPHP3-201ENST00000337331 OR52W1Q6IF63 320 aa14.83□□□□□ -0.04
NPHP3-201ENST00000337331 ZNF322Q6U7Q0 402 aaPredicted RBP14.83□□□□□ -0.04
NPHP3-201ENST00000337331 NAXDQ8IW45 347 aa14.83□□□□□ -0.04
NPHP3-201ENST00000337331 TMEFF1Q8IYR6 380 aa14.83□□□□□ -0.04
NPHP3-201ENST00000337331 C1GALT1Q9NS00 363 aa14.83□□□□□ -0.04
NPHP3-201ENST00000337331 SMCO3A2RU48 225 aa14.82□□□□□ -0.04
NPHP3-201ENST00000337331 H3BML4 177 aa14.82□□□□□ -0.04
NPHP3-201ENST00000337331 RAD51DO75771 328 aa14.82□□□□□ -0.04
NPHP3-201ENST00000337331 SLCO2B1O94956 709 aa14.82□□□□□ -0.04
NPHP3-201ENST00000337331 CPMP14384 443 aa14.82□□□□□ -0.04
NPHP3-201ENST00000337331 OR6T1Q8NGN1 323 aa14.82□□□□□ -0.04
NPHP3-201ENST00000337331 OR13C2Q8NGS9 318 aa14.82□□□□□ -0.04
NPHP3-201ENST00000337331 ZNF417Q8TAU3 575 aa14.82□□□□□ -0.04
NPHP3-201ENST00000337331 SFXN5Q8TD22 340 aa14.82□□□□□ -0.04
NPHP3-201ENST00000337331 ARRDC3Q96B67 414 aa14.82□□□□□ -0.04
NPHP3-201ENST00000337331 ARHGAP9Q9BRR9 750 aa14.82□□□□□ -0.04
NPHP3-201ENST00000337331 MS4A8Q9BY19 250 aa14.82□□□□□ -0.04
NPHP3-201ENST00000337331 ZNF443Q9Y2A4 671 aaPredicted RBP14.82□□□□□ -0.04
NPHP3-201ENST00000337331 A0A087WZY1 265 aa14.82□□□□□ -0.04
NPHP3-201ENST00000337331 H7C417 338 aa14.82□□□□□ -0.04
NPHP3-201ENST00000337331 OR2T1O43869 369 aa14.82□□□□□ -0.04
NPHP3-201ENST00000337331 MGMTP16455 207 aa14.82□□□□□ -0.04
NPHP3-201ENST00000337331 MAOAP21397 527 aa14.82□□□□□ -0.04
NPHP3-201ENST00000337331 BDKRB2P30411 391 aa14.82□□□□□ -0.04
NPHP3-201ENST00000337331 ZNF84P51523 738 aa14.82□□□□□ -0.04
NPHP3-201ENST00000337331 HTRA3P83110 453 aa14.82□□□□□ -0.04
NPHP3-201ENST00000337331 NHLRC3Q5JS37 347 aa14.82□□□□□ -0.04
NPHP3-201ENST00000337331 RAET1LQ5VY80 246 aa14.82□□□□□ -0.04
NPHP3-201ENST00000337331 PLXDC1Q8IUK5 500 aa14.82□□□□□ -0.04
NPHP3-201ENST00000337331 OR2AK2Q8NG84 335 aa14.82□□□□□ -0.04
NPHP3-201ENST00000337331 DVL3Q92997 716 aaPredicted RBP14.82□□□□□ -0.04
NPHP3-201ENST00000337331 HGDQ93099 445 aa14.82□□□□□ -0.04
NPHP3-201ENST00000337331 RHOVQ96L33 236 aa14.82□□□□□ -0.04
NPHP3-201ENST00000337331 TTC3P53804 2025 aa14.82□□□□□ -0.04
NPHP3-201ENST00000337331 TNRC6CQ9HCJ0 1690 aaKnown RBP14.82□□□□□ -0.04
NPHP3-201ENST00000337331 DDX60LQ5H9U9 1706 aaKnown RBP14.82□□□□□ -0.04
NPHP3-201ENST00000337331 LRP5O75197 1615 aa14.82□□□□□ -0.04
NPHP3-201ENST00000337331 TMEM202A6NGA9 273 aa14.82□□□□□ -0.04
NPHP3-201ENST00000337331 PRKRAO75569 313 aaKnown RBP14.82□□□□□ -0.04
NPHP3-201ENST00000337331 HLA-AP01891 365 aaKnown RBP14.82□□□□□ -0.04
NPHP3-201ENST00000337331 PNMTP11086 282 aa14.82□□□□□ -0.04
NPHP3-201ENST00000337331 CR2P20023 1033 aa14.82□□□□□ -0.04
NPHP3-201ENST00000337331 MMP11P24347 488 aa14.82□□□□□ -0.04
NPHP3-201ENST00000337331 GNRHRP30968 328 aa14.82□□□□□ -0.04
NPHP3-201ENST00000337331 TM4SF4P48230 202 aa14.82□□□□□ -0.04
NPHP3-201ENST00000337331 LINC00303Q3SY05 128 aa14.82□□□□□ -0.04
NPHP3-201ENST00000337331 ACTBL2Q562R1 376 aa14.82□□□□□ -0.04
NPHP3-201ENST00000337331 FAM111BQ6SJ93 734 aa14.82□□□□□ -0.04
NPHP3-201ENST00000337331 OR10D4PQ8NGN7 298 aa14.82□□□□□ -0.04
NPHP3-201ENST00000337331 INTS12Q96CB8 462 aaKnown RBP14.82□□□□□ -0.04
NPHP3-201ENST00000337331 TIMM29Q9BSF4 260 aa14.82□□□□□ -0.04
NPHP3-201ENST00000337331 GAR1Q9NY12 217 aaKnown RBP14.82□□□□□ -0.04
NPHP3-201ENST00000337331 URGCP-MRPS24S4R325 110 aa14.82□□□□□ -0.04
NPHP3-201ENST00000337331 V9GY05 133 aa14.82□□□□□ -0.04
NPHP3-201ENST00000337331 A0A0J9YY10 115 aa14.81□□□□□ -0.04
NPHP3-201ENST00000337331 TLE3Q04726 772 aa14.81□□□□□ -0.04
NPHP3-201ENST00000337331 RPE65Q16518 533 aa14.81□□□□□ -0.04
NPHP3-201ENST00000337331 FAM109BQ6ICB4 259 aaPredicted RBP14.81□□□□□ -0.04
NPHP3-201ENST00000337331 OR2W3Q7Z3T1 314 aa14.81□□□□□ -0.04
NPHP3-201ENST00000337331 P4HA3Q7Z4N8 544 aa14.81□□□□□ -0.04
NPHP3-201ENST00000337331 OR5L2Q8NGL0 311 aa14.81□□□□□ -0.04
NPHP3-201ENST00000337331 SLAMF9Q96A28 289 aa14.81□□□□□ -0.04
NPHP3-201ENST00000337331 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.81□□□□□ -0.04
NPHP3-201ENST00000337331 ADAM29Q9UKF5 820 aa14.81□□□□□ -0.04
NPHP3-201ENST00000337331 SMCHD1A6NHR9 2005 aa14.81□□□□□ -0.04
NPHP3-201ENST00000337331 BORCS7-ASMTA0A0B4J1R7 106 aa14.81□□□□□ -0.04
NPHP3-201ENST00000337331 DNASE2O00115 360 aaPredicted RBP14.81□□□□□ -0.04
NPHP3-201ENST00000337331 PTHLHP12272 177 aa14.81□□□□□ -0.04
NPHP3-201ENST00000337331 SEZ6L2Q6UXD5 910 aa14.81□□□□□ -0.04
NPHP3-201ENST00000337331 NEURL3Q96EH8 262 aa14.81□□□□□ -0.04
NPHP3-201ENST00000337331 NECAB3Q96P71 396 aaPredicted RBP14.81□□□□□ -0.04
NPHP3-201ENST00000337331 GLIPR2Q9H4G4 154 aa14.81□□□□□ -0.04
NPHP3-201ENST00000337331 FN3KRPQ9HA64 309 aa14.81□□□□□ -0.04
NPHP3-201ENST00000337331 FBRSQ9HAH7 460 aa14.81□□□□□ -0.04
NPHP3-201ENST00000337331 FAM96BQ9Y3D0 163 aa14.81□□□□□ -0.04
NPHP3-201ENST00000337331 ZNF850A8MQ14 1090 aa14.81□□□□□ -0.04
NPHP3-201ENST00000337331 LILRB3O75022 631 aa14.81□□□□□ -0.04
NPHP3-201ENST00000337331 AKR7A3O95154 331 aa14.81□□□□□ -0.04
NPHP3-201ENST00000337331 FGF9P31371 208 aaPredicted RBP14.81□□□□□ -0.04
NPHP3-201ENST00000337331 DCTDP32321 178 aa14.81□□□□□ -0.04
NPHP3-201ENST00000337331 LRRC69Q6ZNQ3 347 aa14.81□□□□□ -0.04
NPHP3-201ENST00000337331 UBAC2Q8NBM4 344 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 133.4 ms