RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 MYOZ1Q9NP98 299 aaPredicted RBP12.33□□□□□ -0.44
RPUSD4-201ENST00000298317 UPB1Q9UBR1 384 aa12.33□□□□□ -0.44
RPUSD4-201ENST00000298317 KCNE5Q9UJ90 142 aa12.33□□□□□ -0.44
RPUSD4-201ENST00000298317 ABT1Q9ULW3 272 aaKnown RBP12.33□□□□□ -0.44
RPUSD4-201ENST00000298317 GXYLT2A0PJZ3 443 aa12.32□□□□□ -0.44
RPUSD4-201ENST00000298317 OR6C76A6NM76 312 aa12.32□□□□□ -0.44
RPUSD4-201ENST00000298317 RDH16O75452 317 aa12.32□□□□□ -0.44
RPUSD4-201ENST00000298317 FBP1P09467 338 aa12.32□□□□□ -0.44
RPUSD4-201ENST00000298317 PTGFRP43088 359 aa12.32□□□□□ -0.44
RPUSD4-201ENST00000298317 NUBP1P53384 320 aa12.32□□□□□ -0.44
RPUSD4-201ENST00000298317 METAP1P53582 386 aa12.32□□□□□ -0.44
RPUSD4-201ENST00000298317 HTRA4P83105 476 aaPredicted RBP12.32□□□□□ -0.44
RPUSD4-201ENST00000298317 PLAURQ03405 335 aa12.32□□□□□ -0.44
RPUSD4-201ENST00000298317 SSBP1Q04837 148 aaKnown RBP12.32□□□□□ -0.44
RPUSD4-201ENST00000298317 DPTQ07507 201 aa12.32□□□□□ -0.44
RPUSD4-201ENST00000298317 BEX5Q5H9J7 111 aa12.32□□□□□ -0.44
RPUSD4-201ENST00000298317 LIPNQ5VXI9 398 aa12.32□□□□□ -0.44
RPUSD4-201ENST00000298317 RAB12Q6IQ22 244 aa12.32□□□□□ -0.44
RPUSD4-201ENST00000298317 STEAP1BQ6NZ63 245 aa12.32□□□□□ -0.44
RPUSD4-201ENST00000298317 ENPP7Q6UWV6 458 aa12.32□□□□□ -0.44
RPUSD4-201ENST00000298317 NRROSQ86YC3 692 aa12.32□□□□□ -0.44
RPUSD4-201ENST00000298317 ZFP82Q8N141 532 aa12.32□□□□□ -0.44
RPUSD4-201ENST00000298317 OR1J4Q8NGS1 313 aa12.32□□□□□ -0.44
RPUSD4-201ENST00000298317 OR2A1Q8NGT9 310 aa12.32□□□□□ -0.44
RPUSD4-201ENST00000298317 ELP5Q8TE02 316 aa12.32□□□□□ -0.44
RPUSD4-201ENST00000298317 PXYLP1Q8TE99 480 aa12.32□□□□□ -0.44
RPUSD4-201ENST00000298317 HSPA12BQ96MM6 686 aa12.32□□□□□ -0.44
RPUSD4-201ENST00000298317 ZNF426Q9BUY5 554 aa12.32□□□□□ -0.44
RPUSD4-201ENST00000298317 CCL26Q9Y258 94 aa12.32□□□□□ -0.44
RPUSD4-201ENST00000298317 A0A0B4J2E0 115 aa12.32□□□□□ -0.44
RPUSD4-201ENST00000298317 TRBV5-5A0A0J9YX44 114 aa12.32□□□□□ -0.44
RPUSD4-201ENST00000298317 A0A1B0GX12 115 aa12.32□□□□□ -0.44
RPUSD4-201ENST00000298317 SULT2B1O00204 365 aa12.32□□□□□ -0.44
RPUSD4-201ENST00000298317 PEX12O00623 359 aa12.32□□□□□ -0.44
RPUSD4-201ENST00000298317 IMPA2O14732 288 aa12.32□□□□□ -0.44
RPUSD4-201ENST00000298317 C6P13671 934 aa12.32□□□□□ -0.44
RPUSD4-201ENST00000298317 CASRP41180 1078 aa12.32□□□□□ -0.44
RPUSD4-201ENST00000298317 PNLIPRP2P54317 469 aa12.32□□□□□ -0.44
RPUSD4-201ENST00000298317 SRSF3P84103 164 aaKnown RBP12.32□□□□□ -0.44
RPUSD4-201ENST00000298317 TMEM71Q6P5X7 295 aa12.32□□□□□ -0.44
RPUSD4-201ENST00000298317 RBMS3Q6XE24 437 aaKnown RBP12.32□□□□□ -0.44
RPUSD4-201ENST00000298317 ZNF227Q86WZ6 799 aa12.32□□□□□ -0.44
RPUSD4-201ENST00000298317 OR4K14Q8NGD5 310 aa12.32□□□□□ -0.44
RPUSD4-201ENST00000298317 SPOCK3Q9BQ16 436 aa12.32□□□□□ -0.44
RPUSD4-201ENST00000298317 RNF122Q9H9V4 155 aa12.32□□□□□ -0.44
RPUSD4-201ENST00000298317 STEAP1Q9UHE8 339 aa12.32□□□□□ -0.44
RPUSD4-201ENST00000298317 LHX6Q9UPM6 363 aa12.32□□□□□ -0.44
RPUSD4-201ENST00000298317 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.31□□□□□ -0.44
RPUSD4-201ENST00000298317 ARGFXA6NJG6 315 aa12.31□□□□□ -0.44
RPUSD4-201ENST00000298317 PSMD9O00233 223 aa12.31□□□□□ -0.44
RPUSD4-201ENST00000298317 F12P00748 615 aaPredicted RBP12.31□□□□□ -0.44
RPUSD4-201ENST00000298317 NGFRP08138 427 aa12.31□□□□□ -0.44
RPUSD4-201ENST00000298317 FOLR2P14207 255 aa12.31□□□□□ -0.44
RPUSD4-201ENST00000298317 SELPP16109 830 aa12.31□□□□□ -0.44
RPUSD4-201ENST00000298317 ABOP16442 354 aa12.31□□□□□ -0.44
RPUSD4-201ENST00000298317 EFNB2P52799 333 aa12.31□□□□□ -0.44
RPUSD4-201ENST00000298317 PSMD4P55036 377 aaKnown RBP12.31□□□□□ -0.44
RPUSD4-201ENST00000298317 SREBF2Q12772 1141 aa12.31□□□□□ -0.44
RPUSD4-201ENST00000298317 PDZK1IP1Q13113 114 aa12.31□□□□□ -0.44
RPUSD4-201ENST00000298317 SLC35D3Q5M8T2 416 aa12.31□□□□□ -0.44
RPUSD4-201ENST00000298317 BIVMQ86UB2 503 aa12.31□□□□□ -0.44
RPUSD4-201ENST00000298317 GRHL3Q8TE85 626 aa12.31□□□□□ -0.44
RPUSD4-201ENST00000298317 FGF13Q92913 245 aa12.31□□□□□ -0.44
RPUSD4-201ENST00000298317 DVL3Q92997 716 aaPredicted RBP12.31□□□□□ -0.44
RPUSD4-201ENST00000298317 ARSGQ96EG1 525 aa12.31□□□□□ -0.44
RPUSD4-201ENST00000298317 TMEM68Q96MH6 324 aa12.31□□□□□ -0.44
RPUSD4-201ENST00000298317 SLC46A2Q9BY10 475 aa12.31□□□□□ -0.44
RPUSD4-201ENST00000298317 SEC11CQ9BY50 192 aa12.31□□□□□ -0.44
RPUSD4-201ENST00000298317 TMEM100Q9NV29 134 aa12.31□□□□□ -0.44
RPUSD4-201ENST00000298317 COMMD9Q9P000 198 aa12.31□□□□□ -0.44
RPUSD4-201ENST00000298317 NUMA1Q14980 2115 aa12.31□□□□□ -0.44
RPUSD4-201ENST00000298317 A0A1W2PRU2 124 aa12.31□□□□□ -0.44
RPUSD4-201ENST00000298317 MEIS3P1A6NDR6 274 aa12.31□□□□□ -0.44
RPUSD4-201ENST00000298317 TMEM200CA6NKL6 621 aa12.31□□□□□ -0.44
RPUSD4-201ENST00000298317 NUDT19A8MXV4 375 aa12.31□□□□□ -0.44
RPUSD4-201ENST00000298317 TGM5O43548 720 aa12.31□□□□□ -0.44
RPUSD4-201ENST00000298317 CXCL14O95715 111 aa12.31□□□□□ -0.44
RPUSD4-201ENST00000298317 WNT11O96014 354 aa12.31□□□□□ -0.44
RPUSD4-201ENST00000298317 CD79AP11912 226 aa12.31□□□□□ -0.44
RPUSD4-201ENST00000298317 AK4P27144 223 aaPredicted RBP12.31□□□□□ -0.44
RPUSD4-201ENST00000298317 CFPP27918 469 aa12.31□□□□□ -0.44
RPUSD4-201ENST00000298317 GPX4P36969 197 aaPredicted RBP12.31□□□□□ -0.44
RPUSD4-201ENST00000298317 TSFMP43897 325 aaKnown RBP12.31□□□□□ -0.44
RPUSD4-201ENST00000298317 NTHL1P78549 312 aa12.31□□□□□ -0.44
RPUSD4-201ENST00000298317 ECH1Q13011 328 aa12.31□□□□□ -0.44
RPUSD4-201ENST00000298317 C9orf131Q5VYM1 1079 aa12.31□□□□□ -0.44
RPUSD4-201ENST00000298317 METRNLQ641Q3 311 aa12.31□□□□□ -0.44
RPUSD4-201ENST00000298317 FAM109BQ6ICB4 259 aaPredicted RBP12.31□□□□□ -0.44
RPUSD4-201ENST00000298317 GABRG1Q8N1C3 465 aa12.31□□□□□ -0.44
RPUSD4-201ENST00000298317 LRRC25Q8N386 305 aaPredicted RBP12.31□□□□□ -0.44
RPUSD4-201ENST00000298317 OR1J2Q8NGS2 313 aa12.31□□□□□ -0.44
RPUSD4-201ENST00000298317 OR8S1Q8NH09 359 aa12.31□□□□□ -0.44
RPUSD4-201ENST00000298317 STOML3Q8TAV4 291 aa12.31□□□□□ -0.44
RPUSD4-201ENST00000298317 PMM1Q92871 262 aa12.31□□□□□ -0.44
RPUSD4-201ENST00000298317 ARL11Q969Q4 196 aa12.31□□□□□ -0.44
RPUSD4-201ENST00000298317 SLC25A21Q9BQT8 299 aaPredicted RBP12.31□□□□□ -0.44
RPUSD4-201ENST00000298317 YBX2Q9Y2T7 364 aaKnown RBP12.31□□□□□ -0.44
RPUSD4-201ENST00000298317 IER3IP1Q9Y5U9 82 aa12.31□□□□□ -0.44
RPUSD4-201ENST00000298317 TRAV8-7A0A075B6U6 113 aa12.3□□□□□ -0.44
RPUSD4-201ENST00000298317 NPIPA5A0A0B4J1W7 369 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms