RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 ZIC1Q15915 447 aa12.17□□□□□ -0.46
TNFRSF21-201ENST00000296861 CBLN3Q6UW01 205 aa12.17□□□□□ -0.46
TNFRSF21-201ENST00000296861 METTL21AQ8WXB1 218 aa12.17□□□□□ -0.46
TNFRSF21-201ENST00000296861 F5H0A9 414 aaPredicted RBP12.16□□□□□ -0.46
TNFRSF21-201ENST00000296861 ACOT7O00154 380 aa12.16□□□□□ -0.46
TNFRSF21-201ENST00000296861 EFEMP2O95967 443 aa12.16□□□□□ -0.46
TNFRSF21-201ENST00000296861 CELA2BP08218 269 aaPredicted RBP12.16□□□□□ -0.46
TNFRSF21-201ENST00000296861 C5AR1P21730 350 aa12.16□□□□□ -0.46
TNFRSF21-201ENST00000296861 FZD5Q13467 585 aa12.16□□□□□ -0.46
TNFRSF21-201ENST00000296861 ULK3Q6PHR2 472 aa12.16□□□□□ -0.46
TNFRSF21-201ENST00000296861 STAC2Q6ZMT1 411 aa12.16□□□□□ -0.46
TNFRSF21-201ENST00000296861 TTLL10Q6ZVT0 673 aa12.16□□□□□ -0.46
TNFRSF21-201ENST00000296861 MARCH3Q86UD3 253 aa12.16□□□□□ -0.46
TNFRSF21-201ENST00000296861 PDZD9Q8IXQ8 264 aa12.16□□□□□ -0.46
TNFRSF21-201ENST00000296861 PM20D2Q8IYS1 436 aa12.16□□□□□ -0.46
TNFRSF21-201ENST00000296861 OR4C16Q8NGL9 310 aa12.16□□□□□ -0.46
TNFRSF21-201ENST00000296861 RLN3Q8WXF3 142 aa12.16□□□□□ -0.46
TNFRSF21-201ENST00000296861 SPACA5Q96QH8 159 aa12.16□□□□□ -0.46
TNFRSF21-201ENST00000296861 ZNF350Q9GZX5 532 aa12.16□□□□□ -0.46
TNFRSF21-201ENST00000296861 ELL3Q9HB65 397 aaPredicted RBP12.16□□□□□ -0.46
TNFRSF21-201ENST00000296861 MRTO4Q9UKD2 239 aaKnown RBP12.16□□□□□ -0.46
TNFRSF21-201ENST00000296861 POMT2Q9UKY4 750 aa12.16□□□□□ -0.46
TNFRSF21-201ENST00000296861 TRANK1O15050 2925 aa12.16□□□□□ -0.46
TNFRSF21-201ENST00000296861 TRAV8-7A0A075B6U6 113 aa12.16□□□□□ -0.46
TNFRSF21-201ENST00000296861 DCTN6O00399 190 aa12.16□□□□□ -0.46
TNFRSF21-201ENST00000296861 SOX1O00570 391 aaPredicted RBP12.16□□□□□ -0.46
TNFRSF21-201ENST00000296861 AGPAT2O15120 278 aa12.16□□□□□ -0.46
TNFRSF21-201ENST00000296861 PIN1P1O15428 100 aa12.16□□□□□ -0.46
TNFRSF21-201ENST00000296861 S100A11P31949 105 aa12.16□□□□□ -0.46
TNFRSF21-201ENST00000296861 CDKN2AP42771 156 aaKnown RBP12.16□□□□□ -0.46
TNFRSF21-201ENST00000296861 POU3F4P49335 361 aa12.16□□□□□ -0.46
TNFRSF21-201ENST00000296861 ZNF658BQ4V348 819 aaPredicted RBP12.16□□□□□ -0.46
TNFRSF21-201ENST00000296861 STPG1Q5TH74 334 aa12.16□□□□□ -0.46
TNFRSF21-201ENST00000296861 HLA-DQA1Q5Y7H0 255 aa12.16□□□□□ -0.46
TNFRSF21-201ENST00000296861 ZNF707Q96C28 371 aaPredicted RBP12.16□□□□□ -0.46
TNFRSF21-201ENST00000296861 MOGAT1Q96PD6 335 aa12.16□□□□□ -0.46
TNFRSF21-201ENST00000296861 PLA2G2FQ9BZM2 168 aa12.16□□□□□ -0.46
TNFRSF21-201ENST00000296861 ANKRD19PQ9H560 264 aa12.16□□□□□ -0.46
TNFRSF21-201ENST00000296861 HEXA-AS1Q9H8Q6 139 aa12.16□□□□□ -0.46
TNFRSF21-201ENST00000296861 PRTFDC1Q9NRG1 225 aa12.16□□□□□ -0.46
TNFRSF21-201ENST00000296861 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.16□□□□□ -0.46
TNFRSF21-201ENST00000296861 SLC39A1Q9NY26 324 aa12.16□□□□□ -0.46
TNFRSF21-201ENST00000296861 PTTG3PQ9NZH4 202 aa12.16□□□□□ -0.46
TNFRSF21-201ENST00000296861 TBX19O60806 448 aa12.15□□□□□ -0.46
TNFRSF21-201ENST00000296861 SULT1A3P0DMM9 295 aa12.15□□□□□ -0.46
TNFRSF21-201ENST00000296861 SULT1A4P0DMN0 295 aa12.15□□□□□ -0.46
TNFRSF21-201ENST00000296861 C2orf68Q2NKX9 166 aa12.15□□□□□ -0.46
TNFRSF21-201ENST00000296861 CDNFQ49AH0 187 aa12.15□□□□□ -0.46
TNFRSF21-201ENST00000296861 DCAF12L2Q5VW00 463 aa12.15□□□□□ -0.46
TNFRSF21-201ENST00000296861 RPL13AP3Q6NVV1 102 aa12.15□□□□□ -0.46
TNFRSF21-201ENST00000296861 FBXO46Q6PJ61 603 aaPredicted RBP12.15□□□□□ -0.46
TNFRSF21-201ENST00000296861 GSG1LQ6UXU4 331 aa12.15□□□□□ -0.46
TNFRSF21-201ENST00000296861 MDGA2Q7Z553 956 aa12.15□□□□□ -0.46
TNFRSF21-201ENST00000296861 ZNF546Q86UE3 836 aa12.15□□□□□ -0.46
TNFRSF21-201ENST00000296861 OR2L13Q8N349 312 aa12.15□□□□□ -0.46
TNFRSF21-201ENST00000296861 TMEM185AQ8NFB2 350 aa12.15□□□□□ -0.46
TNFRSF21-201ENST00000296861 WDR92Q96MX6 357 aa12.15□□□□□ -0.46
TNFRSF21-201ENST00000296861 ELOVL3Q9HB03 270 aa12.15□□□□□ -0.46
TNFRSF21-201ENST00000296861 THAP10Q9P2Z0 257 aaPredicted RBP12.15□□□□□ -0.46
TNFRSF21-201ENST00000296861 SLC22A7Q9Y694 548 aa12.15□□□□□ -0.46
TNFRSF21-201ENST00000296861 FRMPD3Q5JV73 1810 aa12.15□□□□□ -0.46
TNFRSF21-201ENST00000296861 OR2AT4A6NND4 320 aa12.15□□□□□ -0.46
TNFRSF21-201ENST00000296861 CLDN4O14493 209 aa12.15□□□□□ -0.46
TNFRSF21-201ENST00000296861 TOR1AO14656 332 aa12.15□□□□□ -0.46
TNFRSF21-201ENST00000296861 ECDO95905 644 aaPredicted RBP12.15□□□□□ -0.46
TNFRSF21-201ENST00000296861 EGFP01133 1207 aa12.15□□□□□ -0.46
TNFRSF21-201ENST00000296861 PRSS3P35030 304 aa12.15□□□□□ -0.46
TNFRSF21-201ENST00000296861 OR1D4P47884 311 aa12.15□□□□□ -0.46
TNFRSF21-201ENST00000296861 TDGQ13569 410 aa12.15□□□□□ -0.46
TNFRSF21-201ENST00000296861 C1QL3Q5VWW1 255 aa12.15□□□□□ -0.46
TNFRSF21-201ENST00000296861 RAB12Q6IQ22 244 aa12.15□□□□□ -0.46
TNFRSF21-201ENST00000296861 TMUB2Q71RG4 321 aa12.15□□□□□ -0.46
TNFRSF21-201ENST00000296861 RNF113BQ8IZP6 322 aaKnown RBP12.15□□□□□ -0.46
TNFRSF21-201ENST00000296861 STPG2Q8N412 459 aa12.15□□□□□ -0.46
TNFRSF21-201ENST00000296861 OR4S1Q8NGB4 309 aa12.15□□□□□ -0.46
TNFRSF21-201ENST00000296861 AHCYL2Q96HN2 611 aaKnown RBP12.15□□□□□ -0.46
TNFRSF21-201ENST00000296861 TEX101Q9BY14 249 aa12.15□□□□□ -0.46
TNFRSF21-201ENST00000296861 ZNF230Q9UIE0 474 aaPredicted RBP12.15□□□□□ -0.46
TNFRSF21-201ENST00000296861 KCNG2Q9UJ96 466 aa12.15□□□□□ -0.46
TNFRSF21-201ENST00000296861 KLHDC2Q9Y2U9 406 aa12.15□□□□□ -0.46
TNFRSF21-201ENST00000296861 HEBP2Q9Y5Z4 205 aa12.15□□□□□ -0.46
TNFRSF21-201ENST00000296861 LINC01553A4QN01 128 aa12.15□□□□□ -0.46
TNFRSF21-201ENST00000296861 RAB3DO95716 219 aa12.15□□□□□ -0.46
TNFRSF21-201ENST00000296861 CXCR1P25024 350 aa12.15□□□□□ -0.46
TNFRSF21-201ENST00000296861 LUMP51884 338 aaPredicted RBP12.15□□□□□ -0.46
TNFRSF21-201ENST00000296861 KLF9Q13886 244 aaPredicted RBP12.15□□□□□ -0.46
TNFRSF21-201ENST00000296861 EIF2B1Q14232 305 aaKnown RBP12.15□□□□□ -0.46
TNFRSF21-201ENST00000296861 TMEM240Q5SV17 173 aa12.15□□□□□ -0.46
TNFRSF21-201ENST00000296861 FAM69AQ5T7M9 428 aa12.15□□□□□ -0.46
TNFRSF21-201ENST00000296861 C10orf90Q96M02 699 aa12.15□□□□□ -0.46
TNFRSF21-201ENST00000296861 OR2A5Q96R48 311 aa12.15□□□□□ -0.46
TNFRSF21-201ENST00000296861 TIMP4Q99727 224 aa12.15□□□□□ -0.46
TNFRSF21-201ENST00000296861 TIMM29Q9BSF4 260 aa12.15□□□□□ -0.46
TNFRSF21-201ENST00000296861 HDAC8Q9BY41 377 aa12.15□□□□□ -0.46
TNFRSF21-201ENST00000296861 C12orf10Q9HB07 376 aa12.15□□□□□ -0.46
TNFRSF21-201ENST00000296861 FAM60AQ9NP50 221 aa12.15□□□□□ -0.46
TNFRSF21-201ENST00000296861 ST6GALNAC2Q9UJ37 374 aa12.15□□□□□ -0.46
TNFRSF21-201ENST00000296861 RPS10-NUDT3A0A1W2PQS6 291 aa12.14□□□□□ -0.47
TNFRSF21-201ENST00000296861 GABARAPH6UMI1 98 aa12.14□□□□□ -0.47
TNFRSF21-201ENST00000296861 SLC16A7O60669 478 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms