RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 C8orf4Q9NR00 106 aa12.49□□□□□ -0.41
VPS25-201ENST00000253794 PAPOLBQ9NRJ5 636 aaKnown RBP12.49□□□□□ -0.41
VPS25-201ENST00000253794 MED29Q9NX70 200 aa12.49□□□□□ -0.41
VPS25-201ENST00000253794 KIF17Q9P2E2 1029 aa12.49□□□□□ -0.41
VPS25-201ENST00000253794 ENOPH1Q9UHY7 261 aa12.49□□□□□ -0.41
VPS25-201ENST00000253794 PROCRQ9UNN8 238 aa12.49□□□□□ -0.41
VPS25-201ENST00000253794 SLC35F4A4IF30 521 aa12.48□□□□□ -0.41
VPS25-201ENST00000253794 A8MXE2 369 aa12.48□□□□□ -0.41
VPS25-201ENST00000253794 PYCARD-AS1I3L0S3 204 aa12.48□□□□□ -0.41
VPS25-201ENST00000253794 PDLIM1O00151 329 aa12.48□□□□□ -0.41
VPS25-201ENST00000253794 AHCYL1O43865 530 aa12.48□□□□□ -0.41
VPS25-201ENST00000253794 BCL10O95999 233 aa12.48□□□□□ -0.41
VPS25-201ENST00000253794 BMP5P22003 454 aa12.48□□□□□ -0.41
VPS25-201ENST00000253794 EDNRAP25101 427 aa12.48□□□□□ -0.41
VPS25-201ENST00000253794 SDHAP31040 664 aa12.48□□□□□ -0.41
VPS25-201ENST00000253794 SELENOPP49908 381 aa12.48□□□□□ -0.41
VPS25-201ENST00000253794 ZNF133P52736 654 aaPredicted RBP12.48□□□□□ -0.41
VPS25-201ENST00000253794 IL1RL1Q01638 556 aa12.48□□□□□ -0.41
VPS25-201ENST00000253794 STK11Q15831 433 aa12.48□□□□□ -0.41
VPS25-201ENST00000253794 HIST3H3Q16695 136 aa12.48□□□□□ -0.41
VPS25-201ENST00000253794 SLC36A3Q495N2 470 aa12.48□□□□□ -0.41
VPS25-201ENST00000253794 ANKRD34AQ69YU3 496 aa12.48□□□□□ -0.41
VPS25-201ENST00000253794 CASP12Q6UXS9 341 aa12.48□□□□□ -0.41
VPS25-201ENST00000253794 Q6ZT83 130 aa12.48□□□□□ -0.41
VPS25-201ENST00000253794 WDFY1Q8IWB7 410 aa12.48□□□□□ -0.41
VPS25-201ENST00000253794 LNX2Q8N448 690 aa12.48□□□□□ -0.41
VPS25-201ENST00000253794 PACRGLQ8N7B6 248 aa12.48□□□□□ -0.41
VPS25-201ENST00000253794 ARIH2OSQ8N7S6 290 aa12.48□□□□□ -0.41
VPS25-201ENST00000253794 POMGNT2Q8NAT1 580 aa12.48□□□□□ -0.41
VPS25-201ENST00000253794 OR52L1Q8NGH7 329 aa12.48□□□□□ -0.41
VPS25-201ENST00000253794 ZNF775Q96BV0 537 aaPredicted RBP12.48□□□□□ -0.41
VPS25-201ENST00000253794 SLC25A44Q96H78 314 aaPredicted RBP12.48□□□□□ -0.41
VPS25-201ENST00000253794 TXNDC15Q96J42 360 aa12.48□□□□□ -0.41
VPS25-201ENST00000253794 SAMD8Q96LT4 415 aa12.48□□□□□ -0.41
VPS25-201ENST00000253794 SNX18Q96RF0 628 aa12.48□□□□□ -0.41
VPS25-201ENST00000253794 KCNK17Q96T54 332 aa12.48□□□□□ -0.41
VPS25-201ENST00000253794 POLDIP3Q9BY77 421 aaKnown RBP12.48□□□□□ -0.41
VPS25-201ENST00000253794 SLCO5A1Q9H2Y9 848 aa12.48□□□□□ -0.41
VPS25-201ENST00000253794 EGLN3Q9H6Z9 239 aa12.48□□□□□ -0.41
VPS25-201ENST00000253794 SMURF2Q9HAU4 748 aa12.48□□□□□ -0.41
VPS25-201ENST00000253794 ZNF346Q9UL40 294 aaKnown RBP12.48□□□□□ -0.41
VPS25-201ENST00000253794 BAIAP2Q9UQB8 552 aa12.48□□□□□ -0.41
VPS25-201ENST00000253794 PCNX1Q96RV3 2341 aa12.47□□□□□ -0.41
VPS25-201ENST00000253794 A6NIZ1 184 aa12.47□□□□□ -0.41
VPS25-201ENST00000253794 E9PQ18 207 aa12.47□□□□□ -0.41
VPS25-201ENST00000253794 RPL36A-HNRNPH2H7BZ11 118 aa12.47□□□□□ -0.41
VPS25-201ENST00000253794 SOCS2O14508 198 aa12.47□□□□□ -0.41
VPS25-201ENST00000253794 EI24O14681 340 aa12.47□□□□□ -0.41
VPS25-201ENST00000253794 SLC43A1O75387 559 aa12.47□□□□□ -0.41
VPS25-201ENST00000253794 CLDN14O95500 239 aa12.47□□□□□ -0.41
VPS25-201ENST00000253794 PGA4P0DJD7 388 aa12.47□□□□□ -0.41
VPS25-201ENST00000253794 PGA3P0DJD8 388 aa12.47□□□□□ -0.41
VPS25-201ENST00000253794 IGFBP5P24593 272 aa12.47□□□□□ -0.41
VPS25-201ENST00000253794 RPL4P36578 427 aaKnown RBP12.47□□□□□ -0.41
VPS25-201ENST00000253794 ASCL1P50553 236 aa12.47□□□□□ -0.41
VPS25-201ENST00000253794 RPS6KA3P51812 740 aa12.47□□□□□ -0.41
VPS25-201ENST00000253794 BIDP55957 195 aa12.47□□□□□ -0.41
VPS25-201ENST00000253794 RAP1BP61224 184 aa12.47□□□□□ -0.41
VPS25-201ENST00000253794 RAP1AP62834 184 aa12.47□□□□□ -0.41
VPS25-201ENST00000253794 SLC34A1Q06495 639 aa12.47□□□□□ -0.41
VPS25-201ENST00000253794 OGFRL1Q5TC84 451 aaPredicted RBP12.47□□□□□ -0.41
VPS25-201ENST00000253794 FBXW9Q5XUX1 488 aa12.47□□□□□ -0.41
VPS25-201ENST00000253794 NIPAL3Q6P499 406 aa12.47□□□□□ -0.41
VPS25-201ENST00000253794 ZNF474Q6S9Z5 364 aaPredicted RBP12.47□□□□□ -0.41
VPS25-201ENST00000253794 BEND4Q6ZU67 534 aa12.47□□□□□ -0.41
VPS25-201ENST00000253794 ADCK1Q86TW2 530 aa12.47□□□□□ -0.41
VPS25-201ENST00000253794 IGFN1Q86VF2 1251 aa12.47□□□□□ -0.41
VPS25-201ENST00000253794 C20orf196Q8IYI0 205 aa12.47□□□□□ -0.41
VPS25-201ENST00000253794 ZNF100Q8IYN0 542 aa12.47□□□□□ -0.41
VPS25-201ENST00000253794 GABRG1Q8N1C3 465 aa12.47□□□□□ -0.41
VPS25-201ENST00000253794 CBR4Q8N4T8 237 aa12.47□□□□□ -0.41
VPS25-201ENST00000253794 OR2T33Q8NG76 320 aa12.47□□□□□ -0.41
VPS25-201ENST00000253794 TMEM54Q969K7 222 aa12.47□□□□□ -0.41
VPS25-201ENST00000253794 EME1Q96AY2 570 aa12.47□□□□□ -0.41
VPS25-201ENST00000253794 NMD3Q96D46 503 aaKnown RBP12.47□□□□□ -0.41
VPS25-201ENST00000253794 BOD1Q96IK1 185 aa12.47□□□□□ -0.41
VPS25-201ENST00000253794 ALG12Q9BV10 488 aa12.47□□□□□ -0.41
VPS25-201ENST00000253794 GABARAPL3Q9BY60 117 aa12.47□□□□□ -0.41
VPS25-201ENST00000253794 SLC25A19Q9HC21 320 aa12.47□□□□□ -0.41
VPS25-201ENST00000253794 KRT84Q9NSB2 600 aa12.47□□□□□ -0.41
VPS25-201ENST00000253794 NKX1-2Q9UD57 310 aaPredicted RBP12.47□□□□□ -0.41
VPS25-201ENST00000253794 ADAM18Q9Y3Q7 739 aa12.47□□□□□ -0.41
VPS25-201ENST00000253794 DIDO1Q9BTC0 2240 aaKnown RBP12.47□□□□□ -0.41
VPS25-201ENST00000253794 GCN1Q92616 2671 aaKnown RBP12.47□□□□□ -0.41
VPS25-201ENST00000253794 ZNF726A6NNF4 738 aa12.46□□□□□ -0.41
VPS25-201ENST00000253794 SERPINI2O75830 405 aa12.46□□□□□ -0.41
VPS25-201ENST00000253794 AGFG2O95081 481 aa12.46□□□□□ -0.41
VPS25-201ENST00000253794 SOX14O95416 240 aa12.46□□□□□ -0.41
VPS25-201ENST00000253794 IGHG1P01857 330 aa12.46□□□□□ -0.41
VPS25-201ENST00000253794 IGFBP1P08833 259 aaPredicted RBP12.46□□□□□ -0.41
VPS25-201ENST00000253794 NR2C1P13056 603 aa12.46□□□□□ -0.41
VPS25-201ENST00000253794 ACADSP16219 412 aa12.46□□□□□ -0.41
VPS25-201ENST00000253794 COX5AP20674 150 aa12.46□□□□□ -0.41
VPS25-201ENST00000253794 CRISP1P54107 249 aa12.46□□□□□ -0.41
VPS25-201ENST00000253794 ERVK-25P63136 954 aa12.46□□□□□ -0.41
VPS25-201ENST00000253794 CDK5Q00535 292 aa12.46□□□□□ -0.41
VPS25-201ENST00000253794 TFF3Q07654 80 aa12.46□□□□□ -0.41
VPS25-201ENST00000253794 MELKQ14680 651 aa12.46□□□□□ -0.41
VPS25-201ENST00000253794 CDSNQ15517 529 aa12.46□□□□□ -0.41
VPS25-201ENST00000253794 TRIP10Q15642 601 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms