RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 PRSS27Q9BQR3 290 aa12.59□□□□□ -0.39
SCARB2-227ENST00000640957 RASL12Q9NYN1 266 aa12.59□□□□□ -0.39
SCARB2-227ENST00000640957 ZNF443Q9Y2A4 671 aaPredicted RBP12.59□□□□□ -0.39
SCARB2-227ENST00000640957 TBC1D3DA0A087WVF3 549 aa12.59□□□□□ -0.39
SCARB2-227ENST00000640957 TBC1D3IA0A087WXS9 549 aa12.59□□□□□ -0.39
SCARB2-227ENST00000640957 TBC1D3EA0A087X179 549 aa12.59□□□□□ -0.39
SCARB2-227ENST00000640957 TBC1D3KA0A087X1G2 549 aa12.59□□□□□ -0.39
SCARB2-227ENST00000640957 MEX3AA1L020 520 aaKnown RBP12.59□□□□□ -0.39
SCARB2-227ENST00000640957 TBC1D3FA6NER0 549 aaPredicted RBP12.59□□□□□ -0.39
SCARB2-227ENST00000640957 TBC1D3LB9A6J9 549 aa12.59□□□□□ -0.39
SCARB2-227ENST00000640957 TBC1D3HP0C7X1 549 aa12.59□□□□□ -0.39
SCARB2-227ENST00000640957 VAMP1P23763 118 aa12.59□□□□□ -0.39
SCARB2-227ENST00000640957 PPIAP62937 165 aaKnown RBP12.59□□□□□ -0.39
SCARB2-227ENST00000640957 DUSP5Q16690 384 aa12.59□□□□□ -0.39
SCARB2-227ENST00000640957 TBC1D3GQ6DHY5 549 aa12.59□□□□□ -0.39
SCARB2-227ENST00000640957 TBC1D3CQ6IPX1 549 aa12.59□□□□□ -0.39
SCARB2-227ENST00000640957 TBC1D3Q8IZP1 549 aaPredicted RBP12.59□□□□□ -0.39
SCARB2-227ENST00000640957 SEMA6DQ8NFY4 1073 aa12.59□□□□□ -0.39
SCARB2-227ENST00000640957 C10orf90Q96M02 699 aa12.59□□□□□ -0.39
SCARB2-227ENST00000640957 ELF4Q99607 663 aaPredicted RBP12.59□□□□□ -0.39
SCARB2-227ENST00000640957 TRPV4Q9HBA0 871 aa12.59□□□□□ -0.39
SCARB2-227ENST00000640957 GHRLQ9UBU3 117 aa12.59□□□□□ -0.39
SCARB2-227ENST00000640957 NDRG3Q9UGV2 375 aa12.59□□□□□ -0.39
SCARB2-227ENST00000640957 PLXNA3P51805 1871 aa12.59□□□□□ -0.39
SCARB2-227ENST00000640957 TUBAL3A6NHL2 446 aa12.58□□□□□ -0.4
SCARB2-227ENST00000640957 GRXCR1A8MXD5 290 aa12.58□□□□□ -0.4
SCARB2-227ENST00000640957 ALOX12BO75342 701 aa12.58□□□□□ -0.4
SCARB2-227ENST00000640957 S100A9P06702 114 aaKnown RBP12.58□□□□□ -0.4
SCARB2-227ENST00000640957 ZNF3P17036 446 aa12.58□□□□□ -0.4
SCARB2-227ENST00000640957 BTN3A2P78410 334 aa12.58□□□□□ -0.4
SCARB2-227ENST00000640957 SPAG16Q8N0X2 631 aa12.58□□□□□ -0.4
SCARB2-227ENST00000640957 UBE2E3Q969T4 207 aa12.58□□□□□ -0.4
SCARB2-227ENST00000640957 SELENOIQ9C0D9 397 aa12.58□□□□□ -0.4
SCARB2-227ENST00000640957 SRA1Q9HD15 236 aaKnown RBP12.58□□□□□ -0.4
SCARB2-227ENST00000640957 TMEM74BQ9NUR3 256 aa12.58□□□□□ -0.4
SCARB2-227ENST00000640957 LAMA1P25391 3075 aa12.58□□□□□ -0.4
SCARB2-227ENST00000640957 OR2B8PP59922 312 aa12.58□□□□□ -0.4
SCARB2-227ENST00000640957 SLC7A9P82251 487 aa12.58□□□□□ -0.4
SCARB2-227ENST00000640957 LTBQ06643 244 aa12.58□□□□□ -0.4
SCARB2-227ENST00000640957 SNTB1Q13884 538 aaKnown RBP12.58□□□□□ -0.4
SCARB2-227ENST00000640957 SMCO1Q147U7 214 aa12.58□□□□□ -0.4
SCARB2-227ENST00000640957 TMPPEQ6ZT21 453 aa12.58□□□□□ -0.4
SCARB2-227ENST00000640957 SLC36A1Q7Z2H8 476 aa12.58□□□□□ -0.4
SCARB2-227ENST00000640957 ZAR1Q86SH2 424 aa12.58□□□□□ -0.4
SCARB2-227ENST00000640957 SVBPQ8N300 66 aa12.58□□□□□ -0.4
SCARB2-227ENST00000640957 CXorf40AQ8TE69 158 aa12.58□□□□□ -0.4
SCARB2-227ENST00000640957 GLYATL2Q8WU03 294 aa12.58□□□□□ -0.4
SCARB2-227ENST00000640957 PPP1R1CQ8WVI7 109 aa12.58□□□□□ -0.4
SCARB2-227ENST00000640957 ROBO4Q8WZ75 1007 aa12.58□□□□□ -0.4
SCARB2-227ENST00000640957 LGR4Q9BXB1 951 aa12.58□□□□□ -0.4
SCARB2-227ENST00000640957 BARX1Q9HBU1 254 aaPredicted RBP12.58□□□□□ -0.4
SCARB2-227ENST00000640957 CMC2Q9NRP2 79 aa12.58□□□□□ -0.4
SCARB2-227ENST00000640957 CDV3Q9UKY7 258 aaKnown RBP12.58□□□□□ -0.4
SCARB2-227ENST00000640957 MED19A0JLT2 244 aaPredicted RBP12.57□□□□□ -0.4
SCARB2-227ENST00000640957 TMEM72A0PK05 275 aa12.57□□□□□ -0.4
SCARB2-227ENST00000640957 CPN1P15169 458 aa12.57□□□□□ -0.4
SCARB2-227ENST00000640957 NAA40Q86UY6 237 aa12.57□□□□□ -0.4
SCARB2-227ENST00000640957 SLC35F2Q8IXU6 374 aa12.57□□□□□ -0.4
SCARB2-227ENST00000640957 CDK20Q8IZL9 346 aa12.57□□□□□ -0.4
SCARB2-227ENST00000640957 LINC01555Q8NAE3 123 aa12.57□□□□□ -0.4
SCARB2-227ENST00000640957 C14orf79Q96F83 325 aa12.57□□□□□ -0.4
SCARB2-227ENST00000640957 CYYR1Q96J86 154 aa12.57□□□□□ -0.4
SCARB2-227ENST00000640957 PCOLCE2Q9UKZ9 415 aa12.57□□□□□ -0.4
SCARB2-227ENST00000640957 KLF2Q9Y5W3 355 aaPredicted RBP12.57□□□□□ -0.4
SCARB2-227ENST00000640957 FITM1A5D6W6 292 aa12.57□□□□□ -0.4
SCARB2-227ENST00000640957 OR14I1A6ND48 311 aa12.57□□□□□ -0.4
SCARB2-227ENST00000640957 OR6C65A6NJZ3 312 aa12.57□□□□□ -0.4
SCARB2-227ENST00000640957 ACOT7O00154 380 aa12.57□□□□□ -0.4
SCARB2-227ENST00000640957 KLF4O43474 513 aa12.57□□□□□ -0.4
SCARB2-227ENST00000640957 GSTZ1O43708 216 aaPredicted RBP12.57□□□□□ -0.4
SCARB2-227ENST00000640957 AMY2AP04746 511 aa12.57□□□□□ -0.4
SCARB2-227ENST00000640957 CSNK2A2P19784 350 aaPredicted RBP12.57□□□□□ -0.4
SCARB2-227ENST00000640957 DDX6P26196 483 aaKnown RBP eCLIP12.57□□□□□ -0.4
SCARB2-227ENST00000640957 RFC3P40938 356 aa12.57□□□□□ -0.4
SCARB2-227ENST00000640957 EIF2B1Q14232 305 aaKnown RBP12.57□□□□□ -0.4
SCARB2-227ENST00000640957 DHCR24Q15392 516 aa12.57□□□□□ -0.4
SCARB2-227ENST00000640957 AVPI1Q5T686 147 aa12.57□□□□□ -0.4
SCARB2-227ENST00000640957 HACD4Q5VWC8 232 aa12.57□□□□□ -0.4
SCARB2-227ENST00000640957 C12orf40Q86WS4 652 aa12.57□□□□□ -0.4
SCARB2-227ENST00000640957 ETFBKMTQ8IXQ9 262 aa12.57□□□□□ -0.4
SCARB2-227ENST00000640957 OR1M1Q8NGA1 313 aa12.57□□□□□ -0.4
SCARB2-227ENST00000640957 OR6K3Q8NGY3 331 aa12.57□□□□□ -0.4
SCARB2-227ENST00000640957 SUSD6Q92537 303 aa12.57□□□□□ -0.4
SCARB2-227ENST00000640957 ARHGDIGQ99819 225 aa12.57□□□□□ -0.4
SCARB2-227ENST00000640957 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.57□□□□□ -0.4
SCARB2-227ENST00000640957 NCDNQ9UBB6 729 aa12.57□□□□□ -0.4
SCARB2-227ENST00000640957 MPTX1A8MV57 137 aa12.57□□□□□ -0.4
SCARB2-227ENST00000640957 MCIDASD6RGH6 385 aa12.57□□□□□ -0.4
SCARB2-227ENST00000640957 ADAM11O75078 769 aa12.57□□□□□ -0.4
SCARB2-227ENST00000640957 LDB3O75112 727 aa12.57□□□□□ -0.4
SCARB2-227ENST00000640957 LATS1O95835 1130 aa12.57□□□□□ -0.4
SCARB2-227ENST00000640957 RNF224P0DH78 156 aa12.57□□□□□ -0.4
SCARB2-227ENST00000640957 CPMP14384 443 aa12.57□□□□□ -0.4
SCARB2-227ENST00000640957 PTAFRP25105 342 aa12.57□□□□□ -0.4
SCARB2-227ENST00000640957 ZNF136P52737 540 aa12.57□□□□□ -0.4
SCARB2-227ENST00000640957 SKP1P63208 163 aa12.57□□□□□ -0.4
SCARB2-227ENST00000640957 DHODHQ02127 395 aa12.57□□□□□ -0.4
SCARB2-227ENST00000640957 EXOSC7Q15024 291 aaKnown RBP12.57□□□□□ -0.4
SCARB2-227ENST00000640957 KRBOX4Q5JUW0 171 aa12.57□□□□□ -0.4
SCARB2-227ENST00000640957 LY6G6FQ5SQ64 297 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms