RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 ECDO95905 644 aaPredicted RBP7.34□□□□□ -1.23
GPC3-204ENST00000631057 RENP00797 406 aa7.34□□□□□ -1.23
GPC3-204ENST00000631057 HIST1H2ABP04908 130 aa7.34□□□□□ -1.23
GPC3-204ENST00000631057 RAB40ALP0C0E4 278 aa7.34□□□□□ -1.23
GPC3-204ENST00000631057 ASAH2BP0C7U1 165 aa7.34□□□□□ -1.23
GPC3-204ENST00000631057 CALCBP10092 127 aa7.34□□□□□ -1.23
GPC3-204ENST00000631057 HOXB1P14653 301 aaPredicted RBP7.34□□□□□ -1.23
GPC3-204ENST00000631057 NME1P15531 152 aaKnown RBP7.34□□□□□ -1.23
GPC3-204ENST00000631057 CD1CP29017 333 aa7.34□□□□□ -1.23
GPC3-204ENST00000631057 GDNFP39905 211 aa7.34□□□□□ -1.23
GPC3-204ENST00000631057 CDKN2AP42771 156 aaKnown RBP7.34□□□□□ -1.23
GPC3-204ENST00000631057 SLC37A1P57057 533 aa7.34□□□□□ -1.23
GPC3-204ENST00000631057 MRPS10P82664 201 aaKnown RBP7.34□□□□□ -1.23
GPC3-204ENST00000631057 GALK2Q01415 458 aa7.34□□□□□ -1.23
GPC3-204ENST00000631057 SNTB2Q13425 540 aaKnown RBP7.34□□□□□ -1.23
GPC3-204ENST00000631057 ALKBH1Q13686 389 aaKnown RBP7.34□□□□□ -1.23
GPC3-204ENST00000631057 HSPB2Q16082 182 aa7.34□□□□□ -1.23
GPC3-204ENST00000631057 LINC01559Q495D7 138 aa7.34□□□□□ -1.23
GPC3-204ENST00000631057 C4orf46Q504U0 113 aa7.34□□□□□ -1.23
GPC3-204ENST00000631057 RNASE12Q5GAN4 147 aaKnown RBP7.34□□□□□ -1.23
GPC3-204ENST00000631057 LRRN1Q6UXK5 716 aa7.34□□□□□ -1.23
GPC3-204ENST00000631057 ZNF782Q6ZMW2 699 aaPredicted RBP7.34□□□□□ -1.23
GPC3-204ENST00000631057 HIST3H2AQ7L7L0 130 aa7.34□□□□□ -1.23
GPC3-204ENST00000631057 LINGO2Q7L985 606 aa7.34□□□□□ -1.23
GPC3-204ENST00000631057 FAM122BQ7Z309 247 aa7.34□□□□□ -1.23
GPC3-204ENST00000631057 NANOGNBQ7Z5D8 188 aa7.34□□□□□ -1.23
GPC3-204ENST00000631057 FGD2Q7Z6J4 655 aa7.34□□□□□ -1.23
GPC3-204ENST00000631057 METTL27Q8N6F8 245 aaPredicted RBP7.34□□□□□ -1.23
GPC3-204ENST00000631057 OR2T4Q8NH00 348 aa7.34□□□□□ -1.23
GPC3-204ENST00000631057 OR56B4Q8NH76 319 aa7.34□□□□□ -1.23
GPC3-204ENST00000631057 LMX1AQ8TE12 382 aa7.34□□□□□ -1.23
GPC3-204ENST00000631057 C15orf40Q8WUR7 153 aa7.34□□□□□ -1.23
GPC3-204ENST00000631057 RAB40AQ8WXH6 277 aa7.34□□□□□ -1.23
GPC3-204ENST00000631057 HSD17B8Q92506 261 aa7.34□□□□□ -1.23
GPC3-204ENST00000631057 HIST1H2ACQ93077 130 aa7.34□□□□□ -1.23
GPC3-204ENST00000631057 TGM7Q96PF1 710 aa7.34□□□□□ -1.23
GPC3-204ENST00000631057 OR1F2PQ96R84 312 aa7.34□□□□□ -1.23
GPC3-204ENST00000631057 ORAI3Q9BRQ5 295 aa7.34□□□□□ -1.23
GPC3-204ENST00000631057 LAT2Q9GZY6 243 aa7.34□□□□□ -1.23
GPC3-204ENST00000631057 SLC25A18Q9H1K4 315 aa7.34□□□□□ -1.23
GPC3-204ENST00000631057 PNO1Q9NRX1 252 aaKnown RBP7.34□□□□□ -1.23
GPC3-204ENST00000631057 LANCL2Q9NS86 450 aa7.34□□□□□ -1.23
GPC3-204ENST00000631057 C2orf42Q9NWW7 574 aa7.34□□□□□ -1.23
GPC3-204ENST00000631057 UCKL1Q9NWZ5 548 aa7.34□□□□□ -1.23
GPC3-204ENST00000631057 GRHPRQ9UBQ7 328 aa7.34□□□□□ -1.23
GPC3-204ENST00000631057 ETV7Q9Y603 341 aa7.34□□□□□ -1.23
GPC3-204ENST00000631057 RNF215Q9Y6U7 377 aa7.34□□□□□ -1.23
GPC3-204ENST00000631057 V9GY05 133 aa7.34□□□□□ -1.23
GPC3-204ENST00000631057 FER1L5A0AVI2 2057 aa7.34□□□□□ -1.23
GPC3-204ENST00000631057 FREM3P0C091 2139 aa7.34□□□□□ -1.23
GPC3-204ENST00000631057 IGHV5-51A0A0C4DH38 117 aa7.33□□□□□ -1.24
GPC3-204ENST00000631057 TMEM72A0PK05 275 aa7.33□□□□□ -1.24
GPC3-204ENST00000631057 OR2W5A6NFC9 320 aa7.33□□□□□ -1.24
GPC3-204ENST00000631057 ACOD1A6NK06 481 aa7.33□□□□□ -1.24
GPC3-204ENST00000631057 SHISA7A6NL88 538 aa7.33□□□□□ -1.24
GPC3-204ENST00000631057 SMLR1H3BR10 107 aa7.33□□□□□ -1.24
GPC3-204ENST00000631057 GABARAPH6UMI1 98 aa7.33□□□□□ -1.24
GPC3-204ENST00000631057 PHYHO14832 338 aa7.33□□□□□ -1.24
GPC3-204ENST00000631057 FABP7O15540 132 aa7.33□□□□□ -1.24
GPC3-204ENST00000631057 PRAF2O60831 178 aa7.33□□□□□ -1.24
GPC3-204ENST00000631057 ZNF217O75362 1048 aa7.33□□□□□ -1.24
GPC3-204ENST00000631057 KRT33AO76009 404 aa7.33□□□□□ -1.24
GPC3-204ENST00000631057 TPPPO94811 219 aa7.33□□□□□ -1.24
GPC3-204ENST00000631057 ZFPL1O95159 310 aa7.33□□□□□ -1.24
GPC3-204ENST00000631057 MT-ND4P03905 459 aa7.33□□□□□ -1.24
GPC3-204ENST00000631057 OR8G3PP0DMU2 310 aa7.33□□□□□ -1.24
GPC3-204ENST00000631057 PRKCAP17252 672 aa7.33□□□□□ -1.24
GPC3-204ENST00000631057 DPP4P27487 766 aa7.33□□□□□ -1.24
GPC3-204ENST00000631057 GRPRP30550 384 aa7.33□□□□□ -1.24
GPC3-204ENST00000631057 HTR2BP41595 481 aa7.33□□□□□ -1.24
GPC3-204ENST00000631057 NANOS3P60323 173 aaKnown RBP7.33□□□□□ -1.24
GPC3-204ENST00000631057 DCAF7P61962 342 aa7.33□□□□□ -1.24
GPC3-204ENST00000631057 RPL18Q07020 188 aaKnown RBP7.33□□□□□ -1.24
GPC3-204ENST00000631057 CD226Q15762 336 aa7.33□□□□□ -1.24
GPC3-204ENST00000631057 GSG1Q2KHT4 349 aa7.33□□□□□ -1.24
GPC3-204ENST00000631057 Q499Y3 187 aa7.33□□□□□ -1.24
GPC3-204ENST00000631057 ELFN2Q5R3F8 820 aa7.33□□□□□ -1.24
GPC3-204ENST00000631057 HES5Q5TA89 166 aa7.33□□□□□ -1.24
GPC3-204ENST00000631057 LAMTOR1Q6IAA8 161 aa7.33□□□□□ -1.24
GPC3-204ENST00000631057 FAM199XQ6PEV8 388 aaPredicted RBP7.33□□□□□ -1.24
GPC3-204ENST00000631057 Q6ZS52 159 aa7.33□□□□□ -1.24
GPC3-204ENST00000631057 ESPNLQ6ZVH7 1005 aa7.33□□□□□ -1.24
GPC3-204ENST00000631057 SYT13Q7L8C5 426 aa7.33□□□□□ -1.24
GPC3-204ENST00000631057 CDC20BQ86Y33 519 aa7.33□□□□□ -1.24
GPC3-204ENST00000631057 TMEM151BQ8IW70 566 aa7.33□□□□□ -1.24
GPC3-204ENST00000631057 TIGD4Q8IY51 512 aa7.33□□□□□ -1.24
GPC3-204ENST00000631057 C9orf62Q8N4C0 152 aa7.33□□□□□ -1.24
GPC3-204ENST00000631057 ZNF433Q8N7K0 673 aaPredicted RBP7.33□□□□□ -1.24
GPC3-204ENST00000631057 ZSCAN1Q8NBB4 408 aa7.33□□□□□ -1.24
GPC3-204ENST00000631057 OR11H7Q8NGC8 314 aa7.33□□□□□ -1.24
GPC3-204ENST00000631057 OR5AK2Q8NH90 309 aa7.33□□□□□ -1.24
GPC3-204ENST00000631057 ZNF563Q8TA94 476 aa7.33□□□□□ -1.24
GPC3-204ENST00000631057 PTPMT1Q8WUK0 201 aaPredicted RBP7.33□□□□□ -1.24
GPC3-204ENST00000631057 RGP1Q92546 391 aaPredicted RBP7.33□□□□□ -1.24
GPC3-204ENST00000631057 THRSPQ92748 146 aa7.33□□□□□ -1.24
GPC3-204ENST00000631057 ZDHHC12Q96GR4 267 aa7.33□□□□□ -1.24
GPC3-204ENST00000631057 LCORQ96JN0 433 aaPredicted RBP7.33□□□□□ -1.24
GPC3-204ENST00000631057 ADAD1Q96M93 576 aaKnown RBP7.33□□□□□ -1.24
GPC3-204ENST00000631057 KLHL15Q96M94 604 aa7.33□□□□□ -1.24
GPC3-204ENST00000631057 MOGAT1Q96PD6 335 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms