RNA–Protein interactions for RNA: ENST00000627328.2

PTP4A2-220, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5 BASIC

Gene PTP4A2, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-220ENST00000627328 OR52E8Q6IFG1 317 aa1.29□□□□□ -2.2
PTP4A2-220ENST00000627328 LCN12Q6JVE5 192 aa1.29□□□□□ -2.2
PTP4A2-220ENST00000627328 PLBD1Q6P4A8 553 aa1.29□□□□□ -2.2
PTP4A2-220ENST00000627328 MRPL38Q96DV4 380 aaKnown RBP1.29□□□□□ -2.2
PTP4A2-220ENST00000627328 RIT2Q99578 217 aa1.29□□□□□ -2.2
PTP4A2-220ENST00000627328 DOK1Q99704 481 aa1.29□□□□□ -2.2
PTP4A2-220ENST00000627328 CHAC1Q9BUX1 264 aa1.29□□□□□ -2.2
PTP4A2-220ENST00000627328 TMEM117Q9H0C3 514 aa1.29□□□□□ -2.2
PTP4A2-220ENST00000627328 RBKSQ9H477 322 aa1.29□□□□□ -2.2
PTP4A2-220ENST00000627328 CARHSP1Q9Y2V2 147 aaKnown RBP1.29□□□□□ -2.2
PTP4A2-220ENST00000627328 F11RQ9Y624 299 aaKnown RBP1.29□□□□□ -2.2
PTP4A2-220ENST00000627328 WRNQ14191 1432 aaPredicted RBP eCLIP1.29□□□□□ -2.2
PTP4A2-220ENST00000627328 SNAPC4Q5SXM2 1469 aa1.29□□□□□ -2.2
PTP4A2-220ENST00000627328 CUX1P39880 1505 aa1.29□□□□□ -2.2
PTP4A2-220ENST00000627328 ABCA10Q8WWZ4 1543 aa1.29□□□□□ -2.2
PTP4A2-220ENST00000627328 ABCA5Q8WWZ7 1642 aa1.29□□□□□ -2.2
PTP4A2-220ENST00000627328 KIF13AQ9H1H9 1805 aa1.29□□□□□ -2.2
PTP4A2-220ENST00000627328 IGHV5-10-1A0A0J9YXX1 117 aa1.28□□□□□ -2.2
PTP4A2-220ENST00000627328 ZNF850A8MQ14 1090 aa1.28□□□□□ -2.2
PTP4A2-220ENST00000627328 A8MUU9 505 aa1.28□□□□□ -2.2
PTP4A2-220ENST00000627328 ZSCAN12O43309 604 aa1.28□□□□□ -2.2
PTP4A2-220ENST00000627328 SLC25A14O95258 325 aaPredicted RBP1.28□□□□□ -2.2
PTP4A2-220ENST00000627328 KIR3DL2P43630 455 aa1.28□□□□□ -2.2
PTP4A2-220ENST00000627328 CYB561P49447 251 aa1.28□□□□□ -2.2
PTP4A2-220ENST00000627328 ERCC8Q13216 396 aa1.28□□□□□ -2.2
PTP4A2-220ENST00000627328 SLC39A6Q13433 755 aa1.28□□□□□ -2.2
PTP4A2-220ENST00000627328 VGLL4Q14135 290 aa1.28□□□□□ -2.2
PTP4A2-220ENST00000627328 CEBPEQ15744 281 aa1.28□□□□□ -2.2
PTP4A2-220ENST00000627328 KRTAP6-3Q3LI67 103 aa1.28□□□□□ -2.2
PTP4A2-220ENST00000627328 ZBED5Q49AG3 693 aa1.28□□□□□ -2.2
PTP4A2-220ENST00000627328 TP53I3Q53FA7 332 aa1.28□□□□□ -2.2
PTP4A2-220ENST00000627328 C1QTNF12Q5T7M4 302 aa1.28□□□□□ -2.2
PTP4A2-220ENST00000627328 PEX26Q7Z412 305 aa1.28□□□□□ -2.2
PTP4A2-220ENST00000627328 FAM3CQ92520 227 aa1.28□□□□□ -2.2
PTP4A2-220ENST00000627328 LRRC58Q96CX6 371 aa1.28□□□□□ -2.2
PTP4A2-220ENST00000627328 FAM111AQ96PZ2 611 aa1.28□□□□□ -2.2
PTP4A2-220ENST00000627328 SULT4A1Q9BR01 284 aa1.28□□□□□ -2.2
PTP4A2-220ENST00000627328 GBA3Q9H227 469 aa1.28□□□□□ -2.2
PTP4A2-220ENST00000627328 DPH5Q9H2P9 285 aa1.28□□□□□ -2.2
PTP4A2-220ENST00000627328 RNF167Q9H6Y7 350 aa1.28□□□□□ -2.2
PTP4A2-220ENST00000627328 SLCO1B3Q9NPD5 702 aa1.28□□□□□ -2.2
PTP4A2-220ENST00000627328 SLC17A5Q9NRA2 495 aa1.28□□□□□ -2.2
PTP4A2-220ENST00000627328 EXD2Q9NVH0 621 aa1.28□□□□□ -2.2
PTP4A2-220ENST00000627328 CALYQ9NYX4 217 aa1.28□□□□□ -2.2
PTP4A2-220ENST00000627328 NID2Q14112 1375 aa1.28□□□□□ -2.2
PTP4A2-220ENST00000627328 FHAD1B1AJZ9 1412 aa1.28□□□□□ -2.2
PTP4A2-220ENST00000627328 GRIN2AQ12879 1464 aa1.28□□□□□ -2.2
PTP4A2-220ENST00000627328 ERICH3Q5RHP9 1530 aa1.28□□□□□ -2.2
PTP4A2-220ENST00000627328 CEP170Q5SW79 1584 aa1.28□□□□□ -2.2
PTP4A2-220ENST00000627328 TOP2BQ02880 1626 aa1.28□□□□□ -2.2
PTP4A2-220ENST00000627328 SHROOM2Q13796 1616 aa1.28□□□□□ -2.2
PTP4A2-220ENST00000627328 BIVM-ERCC5R4GMW8 1640 aa1.28□□□□□ -2.2
PTP4A2-220ENST00000627328 TSPOAP1O95153 1857 aa1.28□□□□□ -2.2
PTP4A2-220ENST00000627328 ADAMTS12P58397 1594 aa1.27□□□□□ -2.21
PTP4A2-220ENST00000627328 NUP160Q12769 1436 aa1.27□□□□□ -2.21
PTP4A2-220ENST00000627328 PRG4Q92954 1404 aaPredicted RBP1.27□□□□□ -2.21
PTP4A2-220ENST00000627328 TMEM223A0PJW6 202 aa1.27□□□□□ -2.21
PTP4A2-220ENST00000627328 F8WDY8 70 aa1.27□□□□□ -2.21
PTP4A2-220ENST00000627328 OR1F1O43749 312 aa1.27□□□□□ -2.21
PTP4A2-220ENST00000627328 MFN2O95140 757 aa1.27□□□□□ -2.21
PTP4A2-220ENST00000627328 CDRT1O95170 752 aa1.27□□□□□ -2.21
PTP4A2-220ENST00000627328 MBD3O95983 291 aa1.27□□□□□ -2.21
PTP4A2-220ENST00000627328 IL4P05112 153 aa1.27□□□□□ -2.21
PTP4A2-220ENST00000627328 COL8A2P25067 703 aa1.27□□□□□ -2.21
PTP4A2-220ENST00000627328 P2RY1P47900 373 aa1.27□□□□□ -2.21
PTP4A2-220ENST00000627328 CX3CR1P49238 355 aa1.27□□□□□ -2.21
PTP4A2-220ENST00000627328 TATDN3Q17R31 274 aa1.27□□□□□ -2.21
PTP4A2-220ENST00000627328 TMEM41BQ5BJD5 291 aa1.27□□□□□ -2.21
PTP4A2-220ENST00000627328 SLC10A5Q5PT55 438 aa1.27□□□□□ -2.21
PTP4A2-220ENST00000627328 NTM-AS1Q6ZSK4 140 aa1.27□□□□□ -2.21
PTP4A2-220ENST00000627328 TRIM69Q86WT6 500 aa1.27□□□□□ -2.21
PTP4A2-220ENST00000627328 PLA2G4DQ86XP0 818 aa1.27□□□□□ -2.21
PTP4A2-220ENST00000627328 GRAMD2AQ8IUY3 354 aa1.27□□□□□ -2.21
PTP4A2-220ENST00000627328 CCDC50Q8IVM0 306 aa1.27□□□□□ -2.21
PTP4A2-220ENST00000627328 FNDC5Q8NAU1 212 aa1.27□□□□□ -2.21
PTP4A2-220ENST00000627328 NECAP1Q8NC96 275 aa1.27□□□□□ -2.21
PTP4A2-220ENST00000627328 WFIKKN1Q96NZ8 548 aa1.27□□□□□ -2.21
PTP4A2-220ENST00000627328 GIN1Q9NXP7 522 aa1.27□□□□□ -2.21
PTP4A2-220ENST00000627328 IL36GQ9NZH8 169 aa1.27□□□□□ -2.21
PTP4A2-220ENST00000627328 SPATA7Q9P0W8 599 aa1.27□□□□□ -2.21
PTP4A2-220ENST00000627328 TMCO1Q9UM00 188 aa1.27□□□□□ -2.21
PTP4A2-220ENST00000627328 CUL7Q14999 1698 aa1.26□□□□□ -2.21
PTP4A2-220ENST00000627328 MAPKBP1O60336 1514 aa1.26□□□□□ -2.21
PTP4A2-220ENST00000627328 ABCC10Q5T3U5 1492 aa1.26□□□□□ -2.21
PTP4A2-220ENST00000627328 KIF27Q86VH2 1401 aa1.26□□□□□ -2.21
PTP4A2-220ENST00000627328 YEATS2Q9ULM3 1422 aa1.26□□□□□ -2.21
PTP4A2-220ENST00000627328 BTN3A3O00478 584 aa1.26□□□□□ -2.21
PTP4A2-220ENST00000627328 ZNF207O43670 478 aaKnown RBP1.26□□□□□ -2.21
PTP4A2-220ENST00000627328 BCAS1O75363 584 aaPredicted RBP1.26□□□□□ -2.21
PTP4A2-220ENST00000627328 AP2A1O95782 977 aa1.26□□□□□ -2.21
PTP4A2-220ENST00000627328 SLC7A9P82251 487 aa1.26□□□□□ -2.21
PTP4A2-220ENST00000627328 ACVR1Q04771 509 aa1.26□□□□□ -2.21
PTP4A2-220ENST00000627328 LOXL1Q08397 574 aaPredicted RBP1.26□□□□□ -2.21
PTP4A2-220ENST00000627328 OXA1LQ15070 435 aa1.26□□□□□ -2.21
PTP4A2-220ENST00000627328 CARD16Q5EG05 197 aa1.26□□□□□ -2.21
PTP4A2-220ENST00000627328 HES5Q5TA89 166 aa1.26□□□□□ -2.21
PTP4A2-220ENST00000627328 C1orf94Q6P1W5 598 aa1.26□□□□□ -2.21
PTP4A2-220ENST00000627328 PGAP1Q75T13 922 aa1.26□□□□□ -2.21
PTP4A2-220ENST00000627328 UTS2BQ765I0 119 aa1.26□□□□□ -2.21
PTP4A2-220ENST00000627328 STRADAQ7RTN6 431 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms