RNA–Protein interactions for RNA: ENST00000616545.4

TARDBP-217, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-217ENST00000616545 CLCF1Q9UBD9 225 aa10.4□□□□□ -0.74
TARDBP-217ENST00000616545 IER3IP1Q9Y5U9 82 aa10.4□□□□□ -0.74
TARDBP-217ENST00000616545 CELSR3Q9NYQ7 3312 aa10.4□□□□□ -0.75
TARDBP-217ENST00000616545 DNAJC13O75165 2243 aa10.39□□□□□ -0.75
TARDBP-217ENST00000616545 ZNF407Q9C0G0 2248 aa10.39□□□□□ -0.75
TARDBP-217ENST00000616545 MAP1BP46821 2468 aaKnown RBP10.39□□□□□ -0.75
TARDBP-217ENST00000616545 SNTNA6NMZ2 147 aa10.39□□□□□ -0.75
TARDBP-217ENST00000616545 ZNF726A6NNF4 738 aa10.39□□□□□ -0.75
TARDBP-217ENST00000616545 ZNF716A6NP11 495 aa10.39□□□□□ -0.75
TARDBP-217ENST00000616545 SURF4O15260 269 aa10.39□□□□□ -0.75
TARDBP-217ENST00000616545 PPP1R3DO95685 299 aa10.39□□□□□ -0.75
TARDBP-217ENST00000616545 IGFBP1P08833 259 aaPredicted RBP10.39□□□□□ -0.75
TARDBP-217ENST00000616545 EPHA2P29317 976 aa10.39□□□□□ -0.75
TARDBP-217ENST00000616545 CENPAP49450 140 aa10.39□□□□□ -0.75
TARDBP-217ENST00000616545 CASP6P55212 293 aa10.39□□□□□ -0.75
TARDBP-217ENST00000616545 SNRPGP62308 76 aaKnown RBP10.39□□□□□ -0.75
TARDBP-217ENST00000616545 ERVK-25P63136 954 aa10.39□□□□□ -0.75
TARDBP-217ENST00000616545 CSNK2BP67870 215 aa10.39□□□□□ -0.75
TARDBP-217ENST00000616545 EFNB1P98172 346 aa10.39□□□□□ -0.75
TARDBP-217ENST00000616545 POU3F1Q03052 451 aaPredicted RBP10.39□□□□□ -0.75
TARDBP-217ENST00000616545 MED21Q13503 144 aa10.39□□□□□ -0.75
TARDBP-217ENST00000616545 SNAPC1Q16533 368 aa10.39□□□□□ -0.75
TARDBP-217ENST00000616545 ACSF3Q4G176 576 aaPredicted RBP10.39□□□□□ -0.75
TARDBP-217ENST00000616545 ARMC4Q5T2S8 1044 aa10.39□□□□□ -0.75
TARDBP-217ENST00000616545 C6orf52Q5T4I8 152 aa10.39□□□□□ -0.75
TARDBP-217ENST00000616545 ACSM5Q6NUN0 579 aa10.39□□□□□ -0.75
TARDBP-217ENST00000616545 CREB3L2Q70SY1 520 aa10.39□□□□□ -0.75
TARDBP-217ENST00000616545 P4HA3Q7Z4N8 544 aa10.39□□□□□ -0.75
TARDBP-217ENST00000616545 FGD2Q7Z6J4 655 aa10.39□□□□□ -0.75
TARDBP-217ENST00000616545 THAP5Q7Z6K1 395 aa10.39□□□□□ -0.75
TARDBP-217ENST00000616545 GPAT4Q86UL3 456 aa10.39□□□□□ -0.75
TARDBP-217ENST00000616545 JAZF1Q86VZ6 243 aa10.39□□□□□ -0.75
TARDBP-217ENST00000616545 CCDC103Q8IW40 242 aa10.39□□□□□ -0.75
TARDBP-217ENST00000616545 FAM26EQ8N5C1 309 aa10.39□□□□□ -0.75
TARDBP-217ENST00000616545 OR4Q3Q8NH05 313 aa10.39□□□□□ -0.75
TARDBP-217ENST00000616545 FAM81AQ8TBF8 368 aa10.39□□□□□ -0.75
TARDBP-217ENST00000616545 DNAJA3Q96EY1 480 aa10.39□□□□□ -0.75
TARDBP-217ENST00000616545 Q96MT0 163 aa10.39□□□□□ -0.75
TARDBP-217ENST00000616545 MUS81Q96NY9 551 aa10.39□□□□□ -0.75
TARDBP-217ENST00000616545 ALG12Q9BV10 488 aa10.39□□□□□ -0.75
TARDBP-217ENST00000616545 ENKD1Q9H0I2 346 aa10.39□□□□□ -0.75
TARDBP-217ENST00000616545 TVP23BQ9NYZ1 205 aa10.39□□□□□ -0.75
TARDBP-217ENST00000616545 SEC14L4Q9UDX3 406 aa10.39□□□□□ -0.75
TARDBP-217ENST00000616545 ZNF346Q9UL40 294 aaKnown RBP10.39□□□□□ -0.75
TARDBP-217ENST00000616545 FLVCR1Q9Y5Y0 555 aa10.39□□□□□ -0.75
TARDBP-217ENST00000616545 SH3D21A4FU49 640 aa10.38□□□□□ -0.75
TARDBP-217ENST00000616545 ZNF814B7Z6K7 855 aa10.38□□□□□ -0.75
TARDBP-217ENST00000616545 TRAF3IP2O43734 574 aaPredicted RBP10.38□□□□□ -0.75
TARDBP-217ENST00000616545 SLC19A2O60779 497 aa10.38□□□□□ -0.75
TARDBP-217ENST00000616545 RENP00797 406 aa10.38□□□□□ -0.75
TARDBP-217ENST00000616545 IGHG1P01857 330 aa10.38□□□□□ -0.75
TARDBP-217ENST00000616545 TPOP07202 933 aa10.38□□□□□ -0.75
TARDBP-217ENST00000616545 YES1P07947 543 aa10.38□□□□□ -0.75
TARDBP-217ENST00000616545 IFNGR1P15260 489 aa10.38□□□□□ -0.75
TARDBP-217ENST00000616545 ACVR2AP27037 513 aa10.38□□□□□ -0.75
TARDBP-217ENST00000616545 TIMP3P35625 211 aa10.38□□□□□ -0.75
TARDBP-217ENST00000616545 NFATC3Q12968 1075 aa10.38□□□□□ -0.75
TARDBP-217ENST00000616545 ITGADQ13349 1161 aa10.38□□□□□ -0.75
TARDBP-217ENST00000616545 KRR1Q13601 381 aaKnown RBP10.38□□□□□ -0.75
TARDBP-217ENST00000616545 C1orf185Q5T7R7 199 aa10.38□□□□□ -0.75
TARDBP-217ENST00000616545 TMEM236Q5W0B7 351 aa10.38□□□□□ -0.75
TARDBP-217ENST00000616545 KRT80Q6KB66 452 aa10.38□□□□□ -0.75
TARDBP-217ENST00000616545 ZNF585AQ6P3V2 769 aa10.38□□□□□ -0.75
TARDBP-217ENST00000616545 PTCHD4Q6ZW05 846 aa10.38□□□□□ -0.75
TARDBP-217ENST00000616545 MARVELD2Q8N4S9 558 aa10.38□□□□□ -0.75
TARDBP-217ENST00000616545 IQCF1Q8N6M8 205 aa10.38□□□□□ -0.75
TARDBP-217ENST00000616545 RHOXF1Q8NHV9 184 aa10.38□□□□□ -0.75
TARDBP-217ENST00000616545 ZNF519Q8TB69 540 aa10.38□□□□□ -0.75
TARDBP-217ENST00000616545 FNDC9Q8TBE3 224 aa10.38□□□□□ -0.75
TARDBP-217ENST00000616545 TMEM163Q8TC26 289 aa10.38□□□□□ -0.75
TARDBP-217ENST00000616545 FBLIM1Q8WUP2 373 aa10.38□□□□□ -0.75
TARDBP-217ENST00000616545 ASB10Q8WXI3 467 aa10.38□□□□□ -0.75
TARDBP-217ENST00000616545 ROBO4Q8WZ75 1007 aa10.38□□□□□ -0.75
TARDBP-217ENST00000616545 RFKQ969G6 155 aa10.38□□□□□ -0.75
TARDBP-217ENST00000616545 SLC25A44Q96H78 314 aaPredicted RBP10.38□□□□□ -0.75
TARDBP-217ENST00000616545 GMPPAQ96IJ6 420 aaPredicted RBP10.38□□□□□ -0.75
TARDBP-217ENST00000616545 LRR1Q96L50 414 aa10.38□□□□□ -0.75
TARDBP-217ENST00000616545 Q96M85 177 aa10.38□□□□□ -0.75
TARDBP-217ENST00000616545 PNPLA3Q9NST1 481 aa10.38□□□□□ -0.75
TARDBP-217ENST00000616545 CLN6Q9NWW5 311 aa10.38□□□□□ -0.75
TARDBP-217ENST00000616545 KLHL13Q9P2N7 655 aa10.38□□□□□ -0.75
TARDBP-217ENST00000616545 IL20RAQ9UHF4 553 aa10.38□□□□□ -0.75
TARDBP-217ENST00000616545 LRCH1Q9Y2L9 728 aa10.38□□□□□ -0.75
TARDBP-217ENST00000616545 ADAM18Q9Y3Q7 739 aa10.38□□□□□ -0.75
TARDBP-217ENST00000616545 ZFHX4Q86UP3 3567 aa10.37□□□□□ -0.75
TARDBP-217ENST00000616545 IGHV3-15A0A0B4J1V0 119 aa10.37□□□□□ -0.75
TARDBP-217ENST00000616545 TEX13CA0A0J9YWL9 993 aa10.37□□□□□ -0.75
TARDBP-217ENST00000616545 MBD3L4A6NDZ8 208 aaPredicted RBP10.37□□□□□ -0.75
TARDBP-217ENST00000616545 MBD3L3A6NE82 208 aaPredicted RBP10.37□□□□□ -0.75
TARDBP-217ENST00000616545 MBD3L5A6NJ08 208 aaPredicted RBP10.37□□□□□ -0.75
TARDBP-217ENST00000616545 SS18L1O75177 396 aaPredicted RBP10.37□□□□□ -0.75
TARDBP-217ENST00000616545 WISP2O76076 250 aa10.37□□□□□ -0.75
TARDBP-217ENST00000616545 PLGP00747 810 aaPredicted RBP10.37□□□□□ -0.75
TARDBP-217ENST00000616545 HIST1H1CP16403 213 aaKnown RBP10.37□□□□□ -0.75
TARDBP-217ENST00000616545 CRABP1P29762 137 aa10.37□□□□□ -0.75
TARDBP-217ENST00000616545 ACVR1BP36896 505 aa10.37□□□□□ -0.75
TARDBP-217ENST00000616545 BLVRAP53004 296 aa10.37□□□□□ -0.75
TARDBP-217ENST00000616545 SLC25A1P53007 311 aa10.37□□□□□ -0.75
TARDBP-217ENST00000616545 CLDN17P56750 224 aa10.37□□□□□ -0.75
TARDBP-217ENST00000616545 CXCR4P61073 352 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms