RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 BOD1Q96IK1 185 aa11.74□□□□□ -0.53
CTSA-213ENST00000606782 RADILQ96JH8 1075 aa11.74□□□□□ -0.53
CTSA-213ENST00000606782 RAB3IPQ96QF0 476 aaPredicted RBP11.74□□□□□ -0.53
CTSA-213ENST00000606782 NAA11Q9BSU3 229 aaPredicted RBP11.74□□□□□ -0.53
CTSA-213ENST00000606782 PARPBPQ9NWS1 579 aa11.74□□□□□ -0.53
CTSA-213ENST00000606782 ASB6Q9NWX5 421 aa11.74□□□□□ -0.53
CTSA-213ENST00000606782 TAS2R16Q9NYV7 291 aa11.74□□□□□ -0.53
CTSA-213ENST00000606782 RPS6KB2Q9UBS0 482 aa11.74□□□□□ -0.53
CTSA-213ENST00000606782 FLVCR1Q9Y5Y0 555 aa11.74□□□□□ -0.53
CTSA-213ENST00000606782 SLC25A15Q9Y619 301 aa11.74□□□□□ -0.53
CTSA-213ENST00000606782 V9GYQ6 96 aa11.74□□□□□ -0.53
CTSA-213ENST00000606782 ABCA1O95477 2261 aa11.74□□□□□ -0.53
CTSA-213ENST00000606782 A0A087WUJ7 227 aa11.73□□□□□ -0.53
CTSA-213ENST00000606782 DHRS12A0PJE2 317 aa11.73□□□□□ -0.53
CTSA-213ENST00000606782 ZC3H12DA2A288 527 aaKnown RBP11.73□□□□□ -0.53
CTSA-213ENST00000606782 CPSF4LA6NMK7 179 aaKnown RBP11.73□□□□□ -0.53
CTSA-213ENST00000606782 J3KTA2 159 aa11.73□□□□□ -0.53
CTSA-213ENST00000606782 MRPL33O75394 65 aaKnown RBP11.73□□□□□ -0.53
CTSA-213ENST00000606782 CD8AP01732 235 aa11.73□□□□□ -0.53
CTSA-213ENST00000606782 RAP2AP10114 183 aa11.73□□□□□ -0.53
CTSA-213ENST00000606782 PNMTP11086 282 aa11.73□□□□□ -0.53
CTSA-213ENST00000606782 ITGA2P17301 1181 aa11.73□□□□□ -0.53
CTSA-213ENST00000606782 CXCR1P25024 350 aa11.73□□□□□ -0.53
CTSA-213ENST00000606782 YAP1P46937 504 aaKnown RBP11.73□□□□□ -0.53
CTSA-213ENST00000606782 ACTR3P61158 418 aa11.73□□□□□ -0.53
CTSA-213ENST00000606782 STK11Q15831 433 aa11.73□□□□□ -0.53
CTSA-213ENST00000606782 GABRA6Q16445 453 aa11.73□□□□□ -0.53
CTSA-213ENST00000606782 FAM98BQ52LJ0 330 aaKnown RBP11.73□□□□□ -0.53
CTSA-213ENST00000606782 SWT1Q5T5J6 900 aaKnown RBP11.73□□□□□ -0.53
CTSA-213ENST00000606782 OR7E24Q6IFN5 339 aa11.73□□□□□ -0.53
CTSA-213ENST00000606782 DEF8Q6ZN54 512 aa11.73□□□□□ -0.53
CTSA-213ENST00000606782 DNM1P46Q6ZS02 220 aa11.73□□□□□ -0.53
CTSA-213ENST00000606782 KBTBD8Q8NFY9 601 aa11.73□□□□□ -0.53
CTSA-213ENST00000606782 TMEM45BQ96B21 275 aa11.73□□□□□ -0.53
CTSA-213ENST00000606782 TRMT61AQ96FX7 289 aaKnown RBP11.73□□□□□ -0.53
CTSA-213ENST00000606782 SLC41A3Q96GZ6 507 aa11.73□□□□□ -0.53
CTSA-213ENST00000606782 TRAF4Q9BUZ4 470 aaPredicted RBP11.73□□□□□ -0.53
CTSA-213ENST00000606782 SF3B5Q9BWJ5 86 aaKnown RBP11.73□□□□□ -0.53
CTSA-213ENST00000606782 CISD1Q9NZ45 108 aaKnown RBP11.73□□□□□ -0.53
CTSA-213ENST00000606782 MAGED1Q9Y5V3 778 aaPredicted RBP11.73□□□□□ -0.53
CTSA-213ENST00000606782 ERICH4A6NGS2 130 aa11.72□□□□□ -0.53
CTSA-213ENST00000606782 LIPT2A6NK58 231 aa11.72□□□□□ -0.53
CTSA-213ENST00000606782 SMAD7O15105 426 aaKnown RBP11.72□□□□□ -0.53
CTSA-213ENST00000606782 CHP2O43745 196 aa11.72□□□□□ -0.53
CTSA-213ENST00000606782 NPIPB7O75200 414 aa11.72□□□□□ -0.53
CTSA-213ENST00000606782 RAD51DO75771 328 aa11.72□□□□□ -0.53
CTSA-213ENST00000606782 IGHV3-9P01782 118 aa11.72□□□□□ -0.53
CTSA-213ENST00000606782 FABP3P05413 133 aa11.72□□□□□ -0.53
CTSA-213ENST00000606782 ITGA5P08648 1049 aa11.72□□□□□ -0.53
CTSA-213ENST00000606782 CCNA2P20248 432 aa11.72□□□□□ -0.53
CTSA-213ENST00000606782 FUT4P22083 530 aa11.72□□□□□ -0.53
CTSA-213ENST00000606782 PTAFRP25105 342 aa11.72□□□□□ -0.53
CTSA-213ENST00000606782 IDUAP35475 653 aa11.72□□□□□ -0.53
CTSA-213ENST00000606782 TAS2R41P59536 307 aa11.72□□□□□ -0.53
CTSA-213ENST00000606782 ST3GAL3Q11203 375 aa11.72□□□□□ -0.53
CTSA-213ENST00000606782 TNK1Q13470 666 aa11.72□□□□□ -0.53
CTSA-213ENST00000606782 ALG10BQ5I7T1 473 aa11.72□□□□□ -0.53
CTSA-213ENST00000606782 CYP4Z1Q86W10 505 aa11.72□□□□□ -0.53
CTSA-213ENST00000606782 ZDHHC21Q8IVQ6 265 aa11.72□□□□□ -0.53
CTSA-213ENST00000606782 UBE2J2Q8N2K1 259 aa11.72□□□□□ -0.53
CTSA-213ENST00000606782 ZIC4Q8N9L1 334 aa11.72□□□□□ -0.53
CTSA-213ENST00000606782 PIK3C3Q8NEB9 887 aa11.72□□□□□ -0.53
CTSA-213ENST00000606782 C1orf162Q8NEQ5 155 aaPredicted RBP11.72□□□□□ -0.53
CTSA-213ENST00000606782 STK35Q8TDR2 534 aa11.72□□□□□ -0.53
CTSA-213ENST00000606782 SLCO4A1Q96BD0 722 aa11.72□□□□□ -0.53
CTSA-213ENST00000606782 MPP4Q96JB8 637 aa11.72□□□□□ -0.53
CTSA-213ENST00000606782 DHRS1Q96LJ7 313 aa11.72□□□□□ -0.53
CTSA-213ENST00000606782 PRRC1Q96M27 445 aa11.72□□□□□ -0.53
CTSA-213ENST00000606782 ZNF347Q96SE7 839 aa11.72□□□□□ -0.53
CTSA-213ENST00000606782 PRSS27Q9BQR3 290 aa11.72□□□□□ -0.53
CTSA-213ENST00000606782 ZNF426Q9BUY5 554 aa11.72□□□□□ -0.53
CTSA-213ENST00000606782 CHID1Q9BWS9 393 aa11.72□□□□□ -0.53
CTSA-213ENST00000606782 DENND2DQ9H6A0 471 aaPredicted RBP11.72□□□□□ -0.53
CTSA-213ENST00000606782 NMNAT1Q9HAN9 279 aaPredicted RBP11.72□□□□□ -0.53
CTSA-213ENST00000606782 SELENONQ9NZV5 590 aa11.72□□□□□ -0.53
CTSA-213ENST00000606782 SLC7A7Q9UM01 511 aa11.72□□□□□ -0.53
CTSA-213ENST00000606782 MGAT4BQ9UQ53 548 aa11.72□□□□□ -0.53
CTSA-213ENST00000606782 FAM32AQ9Y421 112 aaKnown RBP11.72□□□□□ -0.53
CTSA-213ENST00000606782 HEATR1Q9H583 2144 aaKnown RBP11.71□□□□□ -0.53
CTSA-213ENST00000606782 IGKV1D-42A0A075B6H8 117 aa11.71□□□□□ -0.53
CTSA-213ENST00000606782 A0A1W2PRQ8 180 aa11.71□□□□□ -0.53
CTSA-213ENST00000606782 CIB4A0PJX0 185 aa11.71□□□□□ -0.53
CTSA-213ENST00000606782 AQP7P3A6NL99 342 aa11.71□□□□□ -0.53
CTSA-213ENST00000606782 ELOA3DA6NLF2 546 aaPredicted RBP11.71□□□□□ -0.53
CTSA-213ENST00000606782 A8MVM7 634 aa11.71□□□□□ -0.53
CTSA-213ENST00000606782 hCG_2039718K7EN88 272 aa11.71□□□□□ -0.53
CTSA-213ENST00000606782 ABCD4O14678 606 aa11.71□□□□□ -0.53
CTSA-213ENST00000606782 RRP9O43818 475 aaKnown RBP11.71□□□□□ -0.53
CTSA-213ENST00000606782 IFNA8P32881 189 aa11.71□□□□□ -0.53
CTSA-213ENST00000606782 P2RY4P51582 365 aa11.71□□□□□ -0.53
CTSA-213ENST00000606782 HMGA2P52926 109 aa11.71□□□□□ -0.53
CTSA-213ENST00000606782 FOXG1P55316 489 aaPredicted RBP11.71□□□□□ -0.53
CTSA-213ENST00000606782 EGR4Q05215 589 aa11.71□□□□□ -0.53
CTSA-213ENST00000606782 FAPQ12884 760 aa11.71□□□□□ -0.53
CTSA-213ENST00000606782 DGCR6Q14129 220 aa11.71□□□□□ -0.53
CTSA-213ENST00000606782 KPNB1Q14974 876 aaKnown RBP11.71□□□□□ -0.53
CTSA-213ENST00000606782 ELOA3BQ3SY89 546 aa11.71□□□□□ -0.53
CTSA-213ENST00000606782 TMEM108Q6UXF1 575 aa11.71□□□□□ -0.53
CTSA-213ENST00000606782 NKAIN4Q8IVV8 208 aa11.71□□□□□ -0.53
CTSA-213ENST00000606782 OFCC1Q8IZS5 231 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms