RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 OXGR1Q96P68 337 aa7.43□□□□□ -1.22
SMAD4-215ENST00000592911 OR51I1Q9H343 314 aa7.43□□□□□ -1.22
SMAD4-215ENST00000592911 ARMC7Q9H6L4 198 aa7.43□□□□□ -1.22
SMAD4-215ENST00000592911 C7orf69Q9H7B7 122 aa7.43□□□□□ -1.22
SMAD4-215ENST00000592911 C12orf10Q9HB07 376 aa7.43□□□□□ -1.22
SMAD4-215ENST00000592911 LPAR2Q9HBW0 351 aa7.43□□□□□ -1.22
SMAD4-215ENST00000592911 GPR35Q9HC97 309 aa7.43□□□□□ -1.22
SMAD4-215ENST00000592911 TNFRSF12AQ9NP84 129 aa7.43□□□□□ -1.22
SMAD4-215ENST00000592911 B3GAT2Q9NPZ5 323 aa7.43□□□□□ -1.22
SMAD4-215ENST00000592911 CGGBP1Q9UFW8 167 aaPredicted RBP7.43□□□□□ -1.22
SMAD4-215ENST00000592911 NUP50Q9UKX7 468 aa7.43□□□□□ -1.22
SMAD4-215ENST00000592911 PRSS51A0A1B0GVH4 220 aa7.42□□□□□ -1.22
SMAD4-215ENST00000592911 ZC3H12DA2A288 527 aaKnown RBP7.42□□□□□ -1.22
SMAD4-215ENST00000592911 DNAJC9-AS1A6NH13 148 aa7.42□□□□□ -1.22
SMAD4-215ENST00000592911 ADARB2-AS1A8MUL3 147 aa7.42□□□□□ -1.22
SMAD4-215ENST00000592911 FTCDNL1E5RQL4 147 aa7.42□□□□□ -1.22
SMAD4-215ENST00000592911 M0QZ24 198 aa7.42□□□□□ -1.22
SMAD4-215ENST00000592911 NR5A2O00482 541 aa7.42□□□□□ -1.22
SMAD4-215ENST00000592911 UBL3O95164 117 aa7.42□□□□□ -1.22
SMAD4-215ENST00000592911 AHSA1O95433 338 aa7.42□□□□□ -1.22
SMAD4-215ENST00000592911 CELA3BP08861 270 aa7.42□□□□□ -1.22
SMAD4-215ENST00000592911 LINC00032P0C843 101 aa7.42□□□□□ -1.22
SMAD4-215ENST00000592911 ZNF250P15622 560 aa7.42□□□□□ -1.22
SMAD4-215ENST00000592911 IL7RP16871 459 aa7.42□□□□□ -1.22
SMAD4-215ENST00000592911 GTF2E2P29084 291 aaKnown RBP7.42□□□□□ -1.22
SMAD4-215ENST00000592911 MTNR1AP48039 350 aa7.42□□□□□ -1.22
SMAD4-215ENST00000592911 ARF1P84077 181 aaKnown RBP7.42□□□□□ -1.22
SMAD4-215ENST00000592911 PLAURQ03405 335 aa7.42□□□□□ -1.22
SMAD4-215ENST00000592911 NPRL3Q12980 569 aa7.42□□□□□ -1.22
SMAD4-215ENST00000592911 PTGR1Q14914 329 aa7.42□□□□□ -1.22
SMAD4-215ENST00000592911 CEACAM16Q2WEN9 425 aa7.42□□□□□ -1.22
SMAD4-215ENST00000592911 UGT3A2Q3SY77 523 aa7.42□□□□□ -1.22
SMAD4-215ENST00000592911 FBLN7Q53RD9 439 aa7.42□□□□□ -1.22
SMAD4-215ENST00000592911 C6orf136Q5SQH8 315 aa7.42□□□□□ -1.22
SMAD4-215ENST00000592911 GKAP1Q5VSY0 366 aaPredicted RBP7.42□□□□□ -1.22
SMAD4-215ENST00000592911 RNF220Q5VTB9 566 aa7.42□□□□□ -1.22
SMAD4-215ENST00000592911 C1orf140Q5VVS0 124 aa7.42□□□□□ -1.22
SMAD4-215ENST00000592911 TMEM154Q6P9G4 183 aa7.42□□□□□ -1.22
SMAD4-215ENST00000592911 MYPOPQ86VE0 399 aaPredicted RBP7.42□□□□□ -1.22
SMAD4-215ENST00000592911 ANKRD46Q86W74 232 aa7.42□□□□□ -1.22
SMAD4-215ENST00000592911 DDIASQ8IXT1 998 aa7.42□□□□□ -1.22
SMAD4-215ENST00000592911 PEX5LQ8IYB4 626 aa7.42□□□□□ -1.22
SMAD4-215ENST00000592911 GSPT2Q8IYD1 628 aaKnown RBP7.42□□□□□ -1.22
SMAD4-215ENST00000592911 TRIML2Q8N7C3 387 aa7.42□□□□□ -1.22
SMAD4-215ENST00000592911 OR6S1Q8NH40 331 aa7.42□□□□□ -1.22
SMAD4-215ENST00000592911 OR5AK3PQ8NH89 298 aa7.42□□□□□ -1.22
SMAD4-215ENST00000592911 XAGE5Q8WWM1 108 aa7.42□□□□□ -1.22
SMAD4-215ENST00000592911 ELMOD3Q96FG2 381 aa7.42□□□□□ -1.22
SMAD4-215ENST00000592911 DPY30Q9C005 99 aa7.42□□□□□ -1.22
SMAD4-215ENST00000592911 KCNF1Q9H3M0 494 aa7.42□□□□□ -1.22
SMAD4-215ENST00000592911 SEC61A2Q9H9S3 476 aa7.42□□□□□ -1.22
SMAD4-215ENST00000592911 A4GALTQ9NPC4 353 aa7.42□□□□□ -1.22
SMAD4-215ENST00000592911 NOP53Q9NZM5 478 aaKnown RBP7.42□□□□□ -1.22
SMAD4-215ENST00000592911 CALML5Q9NZT1 146 aa7.42□□□□□ -1.22
SMAD4-215ENST00000592911 OPN4Q9UHM6 478 aa7.42□□□□□ -1.22
SMAD4-215ENST00000592911 IGHV1-69-2A0A0G2JMI3 117 aa7.41□□□□□ -1.22
SMAD4-215ENST00000592911 A0A1W2PPW3 197 aa7.41□□□□□ -1.22
SMAD4-215ENST00000592911 CDHR4A6H8M9 788 aa7.41□□□□□ -1.22
SMAD4-215ENST00000592911 A6NHS1 94 aa7.41□□□□□ -1.22
SMAD4-215ENST00000592911 AIM2O14862 343 aa7.41□□□□□ -1.22
SMAD4-215ENST00000592911 SCN2BO60939 215 aa7.41□□□□□ -1.22
SMAD4-215ENST00000592911 BCAS1O75363 584 aaPredicted RBP7.41□□□□□ -1.22
SMAD4-215ENST00000592911 RGS9O75916 674 aaPredicted RBP7.41□□□□□ -1.22
SMAD4-215ENST00000592911 NCR1O76036 304 aa7.41□□□□□ -1.22
SMAD4-215ENST00000592911 SNAP29O95721 258 aa7.41□□□□□ -1.22
SMAD4-215ENST00000592911 RAB36O95755 333 aa7.41□□□□□ -1.22
SMAD4-215ENST00000592911 PTHP01270 115 aa7.41□□□□□ -1.22
SMAD4-215ENST00000592911 OR12D1P0DN82 309 aa7.41□□□□□ -1.22
SMAD4-215ENST00000592911 CCNA2P20248 432 aa7.41□□□□□ -1.22
SMAD4-215ENST00000592911 EFNA1P20827 205 aaPredicted RBP7.41□□□□□ -1.22
SMAD4-215ENST00000592911 CASQ1P31415 396 aa7.41□□□□□ -1.22
SMAD4-215ENST00000592911 ARRB2P32121 409 aa7.41□□□□□ -1.22
SMAD4-215ENST00000592911 LIPAP38571 399 aa7.41□□□□□ -1.22
SMAD4-215ENST00000592911 RAD52P43351 418 aa7.41□□□□□ -1.22
SMAD4-215ENST00000592911 KLF3P57682 345 aaPredicted RBP7.41□□□□□ -1.22
SMAD4-215ENST00000592911 BPIFB3P59826 476 aa7.41□□□□□ -1.22
SMAD4-215ENST00000592911 RPS26P62854 115 aaKnown RBP7.41□□□□□ -1.22
SMAD4-215ENST00000592911 TUBA1BP68363 451 aa7.41□□□□□ -1.22
SMAD4-215ENST00000592911 TUBA4AP68366 448 aa7.41□□□□□ -1.22
SMAD4-215ENST00000592911 SLC7A5Q01650 507 aa7.41□□□□□ -1.22
SMAD4-215ENST00000592911 EMX2Q04743 252 aa7.41□□□□□ -1.22
SMAD4-215ENST00000592911 FUT5Q11128 374 aa7.41□□□□□ -1.22
SMAD4-215ENST00000592911 CAMK2DQ13557 499 aa7.41□□□□□ -1.22
SMAD4-215ENST00000592911 NKPD1Q17RQ9 610 aa7.41□□□□□ -1.22
SMAD4-215ENST00000592911 HFEQ30201 348 aa7.41□□□□□ -1.22
SMAD4-215ENST00000592911 NRN1LQ496H8 165 aa7.41□□□□□ -1.22
SMAD4-215ENST00000592911 LIN52Q52LA3 116 aa7.41□□□□□ -1.22
SMAD4-215ENST00000592911 PDCD4Q53EL6 469 aaKnown RBP7.41□□□□□ -1.22
SMAD4-215ENST00000592911 GPAT3Q53EU6 434 aa7.41□□□□□ -1.22
SMAD4-215ENST00000592911 ARMCX4Q5H9R4 360 aa7.41□□□□□ -1.22
SMAD4-215ENST00000592911 MRPL2Q5T653 305 aaKnown RBP7.41□□□□□ -1.22
SMAD4-215ENST00000592911 IL23RQ5VWK5 629 aa7.41□□□□□ -1.22
SMAD4-215ENST00000592911 RGS7BPQ6MZT1 257 aaPredicted RBP7.41□□□□□ -1.22
SMAD4-215ENST00000592911 C6orf89Q6UWU4 347 aa7.41□□□□□ -1.22
SMAD4-215ENST00000592911 UNQ6126/PRO20091Q6UXV3 157 aa7.41□□□□□ -1.22
SMAD4-215ENST00000592911 TUBA1AQ71U36 451 aa7.41□□□□□ -1.22
SMAD4-215ENST00000592911 KIRREL3Q8IZU9 778 aa7.41□□□□□ -1.22
SMAD4-215ENST00000592911 TMEM123Q8N131 208 aa7.41□□□□□ -1.22
SMAD4-215ENST00000592911 FNDC5Q8NAU1 212 aa7.41□□□□□ -1.22
SMAD4-215ENST00000592911 ZNF519Q8TB69 540 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms