RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 GLCEO94923 617 aa16.07■□□□□ 0.16
RAB40C-205ENST00000539661 ITGB2P05107 769 aa16.07■□□□□ 0.16
RAB40C-205ENST00000539661 ANXA2P07355 339 aaKnown RBP16.07■□□□□ 0.16
RAB40C-205ENST00000539661 GTF2F2P13984 249 aa16.07■□□□□ 0.16
RAB40C-205ENST00000539661 CFPP27918 469 aa16.07■□□□□ 0.16
RAB40C-205ENST00000539661 TLX1P31314 330 aaPredicted RBP16.07■□□□□ 0.16
RAB40C-205ENST00000539661 MAGEB1P43366 347 aa16.07■□□□□ 0.16
RAB40C-205ENST00000539661 HFEQ30201 348 aa16.07■□□□□ 0.16
RAB40C-205ENST00000539661 LPCAT3Q6P1A2 487 aa16.07■□□□□ 0.16
RAB40C-205ENST00000539661 LINC00114Q6XXX2 140 aa16.07■□□□□ 0.16
RAB40C-205ENST00000539661 RAB11FIP2Q7L804 512 aa16.07■□□□□ 0.16
RAB40C-205ENST00000539661 FAM220AQ7Z4H9 259 aa16.07■□□□□ 0.16
RAB40C-205ENST00000539661 C12orf45Q8N5I9 185 aaPredicted RBP16.07■□□□□ 0.16
RAB40C-205ENST00000539661 OR5AK2Q8NH90 309 aa16.07■□□□□ 0.16
RAB40C-205ENST00000539661 NT5CQ8TCD5 201 aa16.07■□□□□ 0.16
RAB40C-205ENST00000539661 TSPAN10Q9H1Z9 355 aaPredicted RBP16.07■□□□□ 0.16
RAB40C-205ENST00000539661 ADAP2Q9NPF8 381 aa16.07■□□□□ 0.16
RAB40C-205ENST00000539661 ZMAT5Q9UDW3 170 aaKnown RBP16.07■□□□□ 0.16
RAB40C-205ENST00000539661 OR5K4A6NMS3 321 aa16.07■□□□□ 0.16
RAB40C-205ENST00000539661 MCIDASD6RGH6 385 aa16.07■□□□□ 0.16
RAB40C-205ENST00000539661 BCL2L11O43521 198 aa16.07■□□□□ 0.16
RAB40C-205ENST00000539661 ZNF888P0CJ79 500 aaPredicted RBP16.07■□□□□ 0.16
RAB40C-205ENST00000539661 SLC25A4P12235 298 aa16.07■□□□□ 0.16
RAB40C-205ENST00000539661 ACHEP22303 614 aa16.07■□□□□ 0.16
RAB40C-205ENST00000539661 PEBP1P30086 187 aaKnown RBP16.07■□□□□ 0.16
RAB40C-205ENST00000539661 PPM1AP35813 382 aa16.07■□□□□ 0.16
RAB40C-205ENST00000539661 ADH7P40394 386 aa16.07■□□□□ 0.16
RAB40C-205ENST00000539661 ERVK-25P63136 954 aa16.07■□□□□ 0.16
RAB40C-205ENST00000539661 ALKBH1Q13686 389 aaKnown RBP16.07■□□□□ 0.16
RAB40C-205ENST00000539661 JMJD6Q6NYC1 403 aaPredicted RBP16.07■□□□□ 0.16
RAB40C-205ENST00000539661 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.07■□□□□ 0.16
RAB40C-205ENST00000539661 SVBPQ8N300 66 aa16.07■□□□□ 0.16
RAB40C-205ENST00000539661 OR4D10Q8NGI6 311 aa16.07■□□□□ 0.16
RAB40C-205ENST00000539661 ZNF417Q8TAU3 575 aa16.07■□□□□ 0.16
RAB40C-205ENST00000539661 ZNRF4Q8WWF5 429 aa16.07■□□□□ 0.16
RAB40C-205ENST00000539661 USB1Q9BQ65 265 aaKnown RBP16.07■□□□□ 0.16
RAB40C-205ENST00000539661 TEX101Q9BY14 249 aa16.07■□□□□ 0.16
RAB40C-205ENST00000539661 IL21RQ9HBE5 538 aa16.07■□□□□ 0.16
RAB40C-205ENST00000539661 PQLC2LA1A4F0 135 aa16.06■□□□□ 0.16
RAB40C-205ENST00000539661 ADH5P11766 374 aa16.06■□□□□ 0.16
RAB40C-205ENST00000539661 ALG10BQ5I7T1 473 aa16.06■□□□□ 0.16
RAB40C-205ENST00000539661 LY6G6FQ5SQ64 297 aa16.06■□□□□ 0.16
RAB40C-205ENST00000539661 ELP2Q6IA86 826 aa16.06■□□□□ 0.16
RAB40C-205ENST00000539661 MAMSTRQ6ZN01 415 aa16.06■□□□□ 0.16
RAB40C-205ENST00000539661 BEST3Q8N1M1 668 aa16.06■□□□□ 0.16
RAB40C-205ENST00000539661 SERINC2Q96SA4 455 aa16.06■□□□□ 0.16
RAB40C-205ENST00000539661 UQCC2Q9BRT2 126 aa16.06■□□□□ 0.16
RAB40C-205ENST00000539661 TIMM29Q9BSF4 260 aa16.06■□□□□ 0.16
RAB40C-205ENST00000539661 HDAC8Q9BY41 377 aa16.06■□□□□ 0.16
RAB40C-205ENST00000539661 SLC19A3Q9BZV2 496 aa16.06■□□□□ 0.16
RAB40C-205ENST00000539661 YBX2Q9Y2T7 364 aaKnown RBP16.06■□□□□ 0.16
RAB40C-205ENST00000539661 HCFC2Q9Y5Z7 792 aa16.06■□□□□ 0.16
RAB40C-205ENST00000539661 NUMA1Q14980 2115 aa16.06■□□□□ 0.16
RAB40C-205ENST00000539661 ADH1AP07327 375 aa16.06■□□□□ 0.16
RAB40C-205ENST00000539661 RPS15AP62244 130 aaKnown RBP16.06■□□□□ 0.16
RAB40C-205ENST00000539661 GLT8D1Q68CQ7 371 aa16.06■□□□□ 0.16
RAB40C-205ENST00000539661 ARMC10Q8N2F6 343 aa16.06■□□□□ 0.16
RAB40C-205ENST00000539661 TMEM185AQ8NFB2 350 aa16.06■□□□□ 0.16
RAB40C-205ENST00000539661 OR6K6Q8NGW6 343 aa16.06■□□□□ 0.16
RAB40C-205ENST00000539661 NMNAT3Q96T66 252 aa16.06■□□□□ 0.16
RAB40C-205ENST00000539661 C12orf57Q99622 126 aa16.06■□□□□ 0.16
RAB40C-205ENST00000539661 SLC25A21Q9BQT8 299 aaPredicted RBP16.06■□□□□ 0.16
RAB40C-205ENST00000539661 RXFP3Q9NSD7 469 aa16.06■□□□□ 0.16
RAB40C-205ENST00000539661 TNFSF18Q9UNG2 199 aa16.06■□□□□ 0.16
RAB40C-205ENST00000539661 MOKQ9UQ07 419 aa16.06■□□□□ 0.16
RAB40C-205ENST00000539661 OR6C74A6NCV1 312 aa16.05■□□□□ 0.16
RAB40C-205ENST00000539661 CTAG2O75638 210 aa16.05■□□□□ 0.16
RAB40C-205ENST00000539661 PAK4O96013 591 aaPredicted RBP16.05■□□□□ 0.16
RAB40C-205ENST00000539661 IFI6P09912 130 aa16.05■□□□□ 0.16
RAB40C-205ENST00000539661 P2RY2P41231 377 aa16.05■□□□□ 0.16
RAB40C-205ENST00000539661 MAP3K8P41279 467 aa16.05■□□□□ 0.16
RAB40C-205ENST00000539661 PSMD4P55036 377 aaKnown RBP16.05■□□□□ 0.16
RAB40C-205ENST00000539661 MICBQ29980 383 aa16.05■□□□□ 0.16
RAB40C-205ENST00000539661 PAN3Q58A45 887 aaKnown RBP16.05■□□□□ 0.16
RAB40C-205ENST00000539661 FAM74A1Q5RGS3 127 aa16.05■□□□□ 0.16
RAB40C-205ENST00000539661 FIGNL1Q6PIW4 674 aa16.05■□□□□ 0.16
RAB40C-205ENST00000539661 VN1R4Q7Z5H5 301 aa16.05■□□□□ 0.16
RAB40C-205ENST00000539661 OR4N5Q8IXE1 308 aa16.05■□□□□ 0.16
RAB40C-205ENST00000539661 DUSP19Q8WTR2 217 aa16.05■□□□□ 0.16
RAB40C-205ENST00000539661 NXPE3Q969Y0 559 aa16.05■□□□□ 0.16
RAB40C-205ENST00000539661 CCDC74AQ96AQ1 378 aa16.05■□□□□ 0.16
RAB40C-205ENST00000539661 MKKSQ9NPJ1 570 aaPredicted RBP16.05■□□□□ 0.16
RAB40C-205ENST00000539661 SLC17A5Q9NRA2 495 aa16.05■□□□□ 0.16
RAB40C-205ENST00000539661 TRBV5-7A0A0A0MS05 114 aa16.05■□□□□ 0.16
RAB40C-205ENST00000539661 DISC1C4P0D8 188 aa16.05■□□□□ 0.16
RAB40C-205ENST00000539661 OR4E1P0C645 316 aa16.05■□□□□ 0.16
RAB40C-205ENST00000539661 PRSS3P35030 304 aa16.05■□□□□ 0.16
RAB40C-205ENST00000539661 ACAA2P42765 397 aaKnown RBP16.05■□□□□ 0.16
RAB40C-205ENST00000539661 FNTBP49356 437 aa16.05■□□□□ 0.16
RAB40C-205ENST00000539661 ACTBP60709 375 aa16.05■□□□□ 0.16
RAB40C-205ENST00000539661 ACTG1P63261 375 aa16.05■□□□□ 0.16
RAB40C-205ENST00000539661 STEAP1BQ6NZ63 245 aa16.05■□□□□ 0.16
RAB40C-205ENST00000539661 ZNF595Q8IYB9 648 aa16.05■□□□□ 0.16
RAB40C-205ENST00000539661 CLEC1AQ8NC01 280 aa16.05■□□□□ 0.16
RAB40C-205ENST00000539661 TRIM43Q96BQ3 446 aaPredicted RBP16.05■□□□□ 0.16
RAB40C-205ENST00000539661 NARS2Q96I59 477 aaKnown RBP16.05■□□□□ 0.16
RAB40C-205ENST00000539661 TSNAXQ99598 290 aaKnown RBP16.05■□□□□ 0.16
RAB40C-205ENST00000539661 POFUT1Q9H488 388 aa16.05■□□□□ 0.16
RAB40C-205ENST00000539661 SPHK1Q9NYA1 384 aa16.05■□□□□ 0.16
RAB40C-205ENST00000539661 CPNE7Q9UBL6 633 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms