RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 USP22Q9UPT9 525 aa17.04■□□□□ 0.32
TNFRSF1B-204ENST00000536782 ZNF503-AS2A6NEH8 195 aa17.03■□□□□ 0.32
TNFRSF1B-204ENST00000536782 M0R3G1 203 aa17.03■□□□□ 0.32
TNFRSF1B-204ENST00000536782 POLR3GO15318 223 aaPredicted RBP17.03■□□□□ 0.32
TNFRSF1B-204ENST00000536782 TRAF3IP2O43734 574 aaPredicted RBP17.03■□□□□ 0.32
TNFRSF1B-204ENST00000536782 TPST1O60507 370 aa17.03■□□□□ 0.32
TNFRSF1B-204ENST00000536782 STAMBPO95630 424 aa17.03■□□□□ 0.32
TNFRSF1B-204ENST00000536782 DAOP14920 347 aa17.03■□□□□ 0.32
TNFRSF1B-204ENST00000536782 NQO1P15559 274 aaKnown RBP17.03■□□□□ 0.32
TNFRSF1B-204ENST00000536782 PPIBP23284 216 aaKnown RBP17.03■□□□□ 0.32
TNFRSF1B-204ENST00000536782 KRTAP24-1Q3LI83 254 aa17.03■□□□□ 0.32
TNFRSF1B-204ENST00000536782 BLOC1S3Q6QNY0 202 aa17.03■□□□□ 0.32
TNFRSF1B-204ENST00000536782 COMTD1Q86VU5 262 aa17.03■□□□□ 0.32
TNFRSF1B-204ENST00000536782 MSRB3Q8IXL7 192 aa17.03■□□□□ 0.32
TNFRSF1B-204ENST00000536782 OR6S1Q8NH40 331 aa17.03■□□□□ 0.32
TNFRSF1B-204ENST00000536782 RNF217Q8TC41 542 aa17.03■□□□□ 0.32
TNFRSF1B-204ENST00000536782 EPYCQ99645 322 aa17.03■□□□□ 0.32
TNFRSF1B-204ENST00000536782 SLAMF8Q9P0V8 285 aa17.03■□□□□ 0.32
TNFRSF1B-204ENST00000536782 TESQ9UGI8 421 aaKnown RBP17.03■□□□□ 0.32
TNFRSF1B-204ENST00000536782 CORINQ9Y5Q5 1042 aa17.03■□□□□ 0.32
TNFRSF1B-204ENST00000536782 A0A087WUJ7 227 aa17.02■□□□□ 0.32
TNFRSF1B-204ENST00000536782 MS4A18H0YCH9 400 aa17.02■□□□□ 0.32
TNFRSF1B-204ENST00000536782 SEC14L2O76054 403 aa17.02■□□□□ 0.32
TNFRSF1B-204ENST00000536782 HPRP00739 348 aa17.02■□□□□ 0.32
TNFRSF1B-204ENST00000536782 GIFP27352 417 aa17.02■□□□□ 0.32
TNFRSF1B-204ENST00000536782 SNTB2Q13425 540 aaKnown RBP17.02■□□□□ 0.32
TNFRSF1B-204ENST00000536782 DAG1Q14118 895 aa17.02■□□□□ 0.32
TNFRSF1B-204ENST00000536782 MS4A18Q3C1V0 323 aa17.02■□□□□ 0.32
TNFRSF1B-204ENST00000536782 GLIPR1L2Q4G1C9 344 aa17.02■□□□□ 0.32
TNFRSF1B-204ENST00000536782 TTMPQ5BVD1 217 aa17.02■□□□□ 0.32
TNFRSF1B-204ENST00000536782 PHYHD1Q5SRE7 291 aa17.02■□□□□ 0.32
TNFRSF1B-204ENST00000536782 CARD17Q5XLA6 110 aa17.02■□□□□ 0.32
TNFRSF1B-204ENST00000536782 FUNDC1Q8IVP5 155 aa17.02■□□□□ 0.32
TNFRSF1B-204ENST00000536782 C20orf196Q8IYI0 205 aa17.02■□□□□ 0.32
TNFRSF1B-204ENST00000536782 ZCCHC24Q8N2G6 241 aaKnown RBP17.02■□□□□ 0.32
TNFRSF1B-204ENST00000536782 C10orf111Q8N326 155 aa17.02■□□□□ 0.32
TNFRSF1B-204ENST00000536782 SPDL1Q96EA4 605 aa17.02■□□□□ 0.32
TNFRSF1B-204ENST00000536782 SLC41A3Q96GZ6 507 aa17.02■□□□□ 0.32
TNFRSF1B-204ENST00000536782 C7orf26Q96N11 449 aa17.02■□□□□ 0.32
TNFRSF1B-204ENST00000536782 ASPNQ9BXN1 380 aa17.02■□□□□ 0.32
TNFRSF1B-204ENST00000536782 TMEM27Q9HBJ8 222 aa17.02■□□□□ 0.32
TNFRSF1B-204ENST00000536782 NOX3Q9HBY0 568 aa17.02■□□□□ 0.32
TNFRSF1B-204ENST00000536782 DYNLRB1Q9NP97 96 aa17.02■□□□□ 0.32
TNFRSF1B-204ENST00000536782 B3GAT2Q9NPZ5 323 aa17.02■□□□□ 0.32
TNFRSF1B-204ENST00000536782 CCDC167Q9P0B6 97 aa17.02■□□□□ 0.32
TNFRSF1B-204ENST00000536782 TMEM129A0AVI4 362 aa17.01■□□□□ 0.31
TNFRSF1B-204ENST00000536782 SH3PXD2BA1X283 911 aa17.01■□□□□ 0.31
TNFRSF1B-204ENST00000536782 PRORSD1PA6NEY8 169 aa17.01■□□□□ 0.31
TNFRSF1B-204ENST00000536782 HMGB1P1B2RPK0 211 aaPredicted RBP17.01■□□□□ 0.31
TNFRSF1B-204ENST00000536782 TGDSO95455 350 aa17.01■□□□□ 0.31
TNFRSF1B-204ENST00000536782 HLA-DOBP13765 273 aa17.01■□□□□ 0.31
TNFRSF1B-204ENST00000536782 RGS8P57771 180 aaPredicted RBP17.01■□□□□ 0.31
TNFRSF1B-204ENST00000536782 SCARB2Q14108 478 aa17.01■□□□□ 0.31
TNFRSF1B-204ENST00000536782 ADRM1Q16186 407 aa17.01■□□□□ 0.31
TNFRSF1B-204ENST00000536782 PAGE3Q5JUK9 113 aa17.01■□□□□ 0.31
TNFRSF1B-204ENST00000536782 KRT80Q6KB66 452 aa17.01■□□□□ 0.31
TNFRSF1B-204ENST00000536782 SCAIQ8N9R8 606 aa17.01■□□□□ 0.31
TNFRSF1B-204ENST00000536782 BHLHE22Q8NFJ8 381 aaPredicted RBP17.01■□□□□ 0.31
TNFRSF1B-204ENST00000536782 CKAP2Q8WWK9 683 aa17.01■□□□□ 0.31
TNFRSF1B-204ENST00000536782 LRR1Q96L50 414 aa17.01■□□□□ 0.31
TNFRSF1B-204ENST00000536782 ZNF607Q96SK3 696 aa17.01■□□□□ 0.31
TNFRSF1B-204ENST00000536782 EMC6Q9BV81 110 aa17.01■□□□□ 0.31
TNFRSF1B-204ENST00000536782 TMEM38AQ9H6F2 299 aa17.01■□□□□ 0.31
TNFRSF1B-204ENST00000536782 B3GNT2Q9NY97 397 aa17.01■□□□□ 0.31
TNFRSF1B-204ENST00000536782 VAPAQ9P0L0 249 aa17.01■□□□□ 0.31
TNFRSF1B-204ENST00000536782 SLC13A4Q9UKG4 626 aa17.01■□□□□ 0.31
TNFRSF1B-204ENST00000536782 CORO2BQ9UQ03 480 aa17.01■□□□□ 0.31
TNFRSF1B-204ENST00000536782 GMEB1Q9Y692 573 aa17.01■□□□□ 0.31
TNFRSF1B-204ENST00000536782 A0A0B4J2E0 115 aa17■□□□□ 0.31
TNFRSF1B-204ENST00000536782 A0A1B0GX12 115 aa17■□□□□ 0.31
TNFRSF1B-204ENST00000536782 LRP5LA4QPB2 252 aa17■□□□□ 0.31
TNFRSF1B-204ENST00000536782 SERPINB7O75635 380 aa17■□□□□ 0.31
TNFRSF1B-204ENST00000536782 BGLAPP02818 100 aa17■□□□□ 0.31
TNFRSF1B-204ENST00000536782 SLC6A2P23975 617 aa17■□□□□ 0.31
TNFRSF1B-204ENST00000536782 IDH3AP50213 366 aa17■□□□□ 0.31
TNFRSF1B-204ENST00000536782 CHN2P52757 468 aa17■□□□□ 0.31
TNFRSF1B-204ENST00000536782 POU3F1Q03052 451 aaPredicted RBP17■□□□□ 0.31
TNFRSF1B-204ENST00000536782 PMS2P3Q13401 168 aa17■□□□□ 0.31
TNFRSF1B-204ENST00000536782 OR1Q1Q15612 314 aa17■□□□□ 0.31
TNFRSF1B-204ENST00000536782 GSG1Q2KHT4 349 aa17■□□□□ 0.31
TNFRSF1B-204ENST00000536782 CDK20Q8IZL9 346 aa17■□□□□ 0.31
TNFRSF1B-204ENST00000536782 ZNF786Q8N393 782 aa17■□□□□ 0.31
TNFRSF1B-204ENST00000536782 SOX7Q9BT81 388 aa17■□□□□ 0.31
TNFRSF1B-204ENST00000536782 POFUT2Q9Y2G5 429 aa17■□□□□ 0.31
TNFRSF1B-204ENST00000536782 CMAHPQ9Y471 501 aa17■□□□□ 0.31
TNFRSF1B-204ENST00000536782 NOX1Q9Y5S8 564 aa17■□□□□ 0.31
TNFRSF1B-204ENST00000536782 ZNF726A6NNF4 738 aa16.99■□□□□ 0.31
TNFRSF1B-204ENST00000536782 EVPLLA8MZ36 301 aa16.99■□□□□ 0.31
TNFRSF1B-204ENST00000536782 HLA-HP01893 362 aa16.99■□□□□ 0.31
TNFRSF1B-204ENST00000536782 ADRA2AP08913 450 aa16.99■□□□□ 0.31
TNFRSF1B-204ENST00000536782 TACSTD2P09758 323 aa16.99■□□□□ 0.31
TNFRSF1B-204ENST00000536782 CD79AP11912 226 aa16.99■□□□□ 0.31
TNFRSF1B-204ENST00000536782 GPX2P18283 190 aa16.99■□□□□ 0.31
TNFRSF1B-204ENST00000536782 NR4A1P22736 598 aa16.99■□□□□ 0.31
TNFRSF1B-204ENST00000536782 PUDPQ08623 228 aa16.99■□□□□ 0.31
TNFRSF1B-204ENST00000536782 SQLEQ14534 574 aa16.99■□□□□ 0.31
TNFRSF1B-204ENST00000536782 CR1LQ2VPA4 569 aa16.99■□□□□ 0.31
TNFRSF1B-204ENST00000536782 ZNF813Q6ZN06 617 aa16.99■□□□□ 0.31
TNFRSF1B-204ENST00000536782 RANBP3LQ86VV4 465 aaPredicted RBP16.99■□□□□ 0.31
TNFRSF1B-204ENST00000536782 SNX32Q86XE0 403 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms