RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 WFDC8Q8IUA0 241 aa19.99■□□□□ 0.79
SFSWAP-204ENST00000535399 ANKK1Q8NFD2 765 aa19.99■□□□□ 0.79
SFSWAP-204ENST00000535399 MCUR1Q96AQ8 359 aa19.99■□□□□ 0.79
SFSWAP-204ENST00000535399 ASB9Q96DX5 294 aa19.99■□□□□ 0.79
SFSWAP-204ENST00000535399 MUS81Q96NY9 551 aa19.99■□□□□ 0.79
SFSWAP-204ENST00000535399 BTBD10Q9BSF8 475 aa19.99■□□□□ 0.79
SFSWAP-204ENST00000535399 EMC6Q9BV81 110 aa19.99■□□□□ 0.79
SFSWAP-204ENST00000535399 POLDIP3Q9BY77 421 aaKnown RBP19.99■□□□□ 0.79
SFSWAP-204ENST00000535399 OR5H1A6NKK0 313 aa19.98■□□□□ 0.79
SFSWAP-204ENST00000535399 BLOC1S5-TXNDC5H3BN57 136 aa19.98■□□□□ 0.79
SFSWAP-204ENST00000535399 RNF13O43567 381 aa19.98■□□□□ 0.79
SFSWAP-204ENST00000535399 SERPINI2O75830 405 aa19.98■□□□□ 0.79
SFSWAP-204ENST00000535399 IFNGR1P15260 489 aa19.98■□□□□ 0.79
SFSWAP-204ENST00000535399 LOXP28300 417 aaPredicted RBP19.98■□□□□ 0.79
SFSWAP-204ENST00000535399 RPL18Q07020 188 aaKnown RBP19.98■□□□□ 0.79
SFSWAP-204ENST00000535399 GABRA6Q16445 453 aa19.98■□□□□ 0.79
SFSWAP-204ENST00000535399 TIMM23BQ5SRD1 257 aa19.98■□□□□ 0.79
SFSWAP-204ENST00000535399 SEZ6L2Q6UXD5 910 aa19.98■□□□□ 0.79
SFSWAP-204ENST00000535399 CDC20BQ86Y33 519 aa19.98■□□□□ 0.79
SFSWAP-204ENST00000535399 ALKBH3Q96Q83 286 aaPredicted RBP19.98■□□□□ 0.79
SFSWAP-204ENST00000535399 FUZQ9BT04 418 aa19.98■□□□□ 0.79
SFSWAP-204ENST00000535399 SPG11Q96JI7 2443 aa19.98■□□□□ 0.79
SFSWAP-204ENST00000535399 PRR14LQ5THK1 2151 aa19.98■□□□□ 0.79
SFSWAP-204ENST00000535399 ALPK2Q86TB3 2170 aa19.98■□□□□ 0.79
SFSWAP-204ENST00000535399 TRBV4-1A0A0J9YWV2 114 aa19.97■□□□□ 0.79
SFSWAP-204ENST00000535399 A0A1W2PPR1 153 aa19.97■□□□□ 0.79
SFSWAP-204ENST00000535399 SLC35F4A4IF30 521 aa19.97■□□□□ 0.79
SFSWAP-204ENST00000535399 ZNF587BE7ETH6 402 aa19.97■□□□□ 0.79
SFSWAP-204ENST00000535399 KRT33AO76009 404 aa19.97■□□□□ 0.79
SFSWAP-204ENST00000535399 FABP3P05413 133 aa19.97■□□□□ 0.79
SFSWAP-204ENST00000535399 AQP2P41181 271 aa19.97■□□□□ 0.79
SFSWAP-204ENST00000535399 STK11Q15831 433 aa19.97■□□□□ 0.79
SFSWAP-204ENST00000535399 SLC35D2Q76EJ3 337 aa19.97■□□□□ 0.79
SFSWAP-204ENST00000535399 ABHD12BQ7Z5M8 362 aaPredicted RBP19.97■□□□□ 0.79
SFSWAP-204ENST00000535399 P2RY8Q86VZ1 359 aa19.97■□□□□ 0.79
SFSWAP-204ENST00000535399 ZDHHC21Q8IVQ6 265 aa19.97■□□□□ 0.79
SFSWAP-204ENST00000535399 C20orf196Q8IYI0 205 aa19.97■□□□□ 0.79
SFSWAP-204ENST00000535399 C1orf162Q8NEQ5 155 aaPredicted RBP19.97■□□□□ 0.79
SFSWAP-204ENST00000535399 MOSPD2Q8NHP6 518 aa19.97■□□□□ 0.79
SFSWAP-204ENST00000535399 TEX15Q9BXT5 2789 aa19.96■□□□□ 0.79
SFSWAP-204ENST00000535399 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP19.96■□□□□ 0.79
SFSWAP-204ENST00000535399 ROR2Q01974 943 aaKnown RBP19.96■□□□□ 0.79
SFSWAP-204ENST00000535399 TGFBR3Q03167 851 aa19.96■□□□□ 0.79
SFSWAP-204ENST00000535399 TRAP1Q12931 704 aaKnown RBP19.96■□□□□ 0.79
SFSWAP-204ENST00000535399 FHL1Q13642 323 aa19.96■□□□□ 0.79
SFSWAP-204ENST00000535399 SEC23BQ15437 767 aa19.96■□□□□ 0.79
SFSWAP-204ENST00000535399 BEX5Q5H9J7 111 aa19.96■□□□□ 0.79
SFSWAP-204ENST00000535399 FGD3Q5JSP0 725 aa19.96■□□□□ 0.79
SFSWAP-204ENST00000535399 PHYHD1Q5SRE7 291 aa19.96■□□□□ 0.79
SFSWAP-204ENST00000535399 CARD17Q5XLA6 110 aa19.96■□□□□ 0.79
SFSWAP-204ENST00000535399 FBXW10Q5XX13 1052 aa19.96■□□□□ 0.79
SFSWAP-204ENST00000535399 OR7E24Q6IFN5 339 aa19.96■□□□□ 0.79
SFSWAP-204ENST00000535399 ALKBH2Q6NS38 261 aa19.96■□□□□ 0.79
SFSWAP-204ENST00000535399 PIWIL3Q7Z3Z3 882 aaKnown RBP19.96■□□□□ 0.79
SFSWAP-204ENST00000535399 PIK3IP1Q96FE7 263 aa19.96■□□□□ 0.79
SFSWAP-204ENST00000535399 LRR1Q96L50 414 aa19.96■□□□□ 0.79
SFSWAP-204ENST00000535399 HS3ST6Q96QI5 342 aa19.96■□□□□ 0.79
SFSWAP-204ENST00000535399 SEPHS2Q99611 448 aa19.96■□□□□ 0.79
SFSWAP-204ENST00000535399 HIF3AQ9Y2N7 669 aa19.96■□□□□ 0.79
SFSWAP-204ENST00000535399 CSMD1Q96PZ7 3565 aa19.95■□□□□ 0.78
SFSWAP-204ENST00000535399 LRBAP50851 2863 aa19.95■□□□□ 0.78
SFSWAP-204ENST00000535399 ZNF726A6NNF4 738 aa19.95■□□□□ 0.78
SFSWAP-204ENST00000535399 EFCAB9A8MZ26 197 aa19.95■□□□□ 0.78
SFSWAP-204ENST00000535399 RPL36A-HNRNPH2H7BZ11 118 aa19.95■□□□□ 0.78
SFSWAP-204ENST00000535399 DNAJC8O75937 253 aaPredicted RBP19.95■□□□□ 0.78
SFSWAP-204ENST00000535399 F13BP05160 661 aa19.95■□□□□ 0.78
SFSWAP-204ENST00000535399 MAGEA2P43356 314 aa19.95■□□□□ 0.78
SFSWAP-204ENST00000535399 BIDP55957 195 aa19.95■□□□□ 0.78
SFSWAP-204ENST00000535399 SMIM11AP58511 58 aa19.95■□□□□ 0.78
SFSWAP-204ENST00000535399 RPS4XP62701 263 aaKnown RBP19.95■□□□□ 0.78
SFSWAP-204ENST00000535399 SPIBQ01892 262 aa19.95■□□□□ 0.78
SFSWAP-204ENST00000535399 CAMK2DQ13557 499 aa19.95■□□□□ 0.78
SFSWAP-204ENST00000535399 LAPTM4AQ15012 233 aa19.95■□□□□ 0.78
SFSWAP-204ENST00000535399 PPA1Q15181 289 aa19.95■□□□□ 0.78
SFSWAP-204ENST00000535399 TMPRSS11FQ6ZWK6 438 aa19.95■□□□□ 0.78
SFSWAP-204ENST00000535399 GPR137CQ8N3F9 429 aa19.95■□□□□ 0.78
SFSWAP-204ENST00000535399 WDR31Q8NA23 367 aa19.95■□□□□ 0.78
SFSWAP-204ENST00000535399 OR52J3Q8NH60 311 aa19.95■□□□□ 0.78
SFSWAP-204ENST00000535399 OR6X1Q8NH79 312 aa19.95■□□□□ 0.78
SFSWAP-204ENST00000535399 BOD1Q96IK1 185 aa19.95■□□□□ 0.78
SFSWAP-204ENST00000535399 MAGIXQ9H6Y5 334 aa19.95■□□□□ 0.78
SFSWAP-204ENST00000535399 GPR35Q9HC97 309 aa19.95■□□□□ 0.78
SFSWAP-204ENST00000535399 INIPQ9NRY2 104 aa19.95■□□□□ 0.78
SFSWAP-204ENST00000535399 SLC25A15Q9Y619 301 aa19.95■□□□□ 0.78
SFSWAP-204ENST00000535399 CLOCKO15516 846 aa19.94■□□□□ 0.78
SFSWAP-204ENST00000535399 SAGP10523 405 aaPredicted RBP19.94■□□□□ 0.78
SFSWAP-204ENST00000535399 GPR4P46093 362 aa19.94■□□□□ 0.78
SFSWAP-204ENST00000535399 MELKQ14680 651 aa19.94■□□□□ 0.78
SFSWAP-204ENST00000535399 HMBOX1Q6NT76 420 aa19.94■□□□□ 0.78
SFSWAP-204ENST00000535399 RRM2BQ7LG56 351 aa19.94■□□□□ 0.78
SFSWAP-204ENST00000535399 C17orf78Q8N4C9 275 aa19.94■□□□□ 0.78
SFSWAP-204ENST00000535399 OR13C2Q8NGS9 318 aa19.94■□□□□ 0.78
SFSWAP-204ENST00000535399 NRGNQ92686 78 aa19.94■□□□□ 0.78
SFSWAP-204ENST00000535399 MUCL1Q96DR8 90 aa19.94■□□□□ 0.78
SFSWAP-204ENST00000535399 ZNF837Q96EG3 531 aaPredicted RBP19.94■□□□□ 0.78
SFSWAP-204ENST00000535399 ZNF347Q96SE7 839 aa19.94■□□□□ 0.78
SFSWAP-204ENST00000535399 CADM1Q9BY67 442 aaKnown RBP19.94■□□□□ 0.78
SFSWAP-204ENST00000535399 PLEKHF2Q9H8W4 249 aa19.94■□□□□ 0.78
SFSWAP-204ENST00000535399 SLC17A5Q9NRA2 495 aa19.94■□□□□ 0.78
SFSWAP-204ENST00000535399 TMEM5Q9Y2B1 443 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms