RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 IL32P24001 234 aa11.3□□□□□ -0.6
VEGFA-224ENST00000523873 OMPP47874 163 aa11.3□□□□□ -0.6
VEGFA-224ENST00000523873 LIMS1P48059 325 aa11.3□□□□□ -0.6
VEGFA-224ENST00000523873 BIDP55957 195 aa11.3□□□□□ -0.6
VEGFA-224ENST00000523873 ITGADQ13349 1161 aa11.3□□□□□ -0.6
VEGFA-224ENST00000523873 FHL1Q13642 323 aa11.3□□□□□ -0.6
VEGFA-224ENST00000523873 SLC35D2Q76EJ3 337 aa11.3□□□□□ -0.6
VEGFA-224ENST00000523873 PXKQ7Z7A4 578 aa11.3□□□□□ -0.6
VEGFA-224ENST00000523873 TMEM123Q8N131 208 aa11.3□□□□□ -0.6
VEGFA-224ENST00000523873 ZNF433Q8N7K0 673 aaPredicted RBP11.3□□□□□ -0.6
VEGFA-224ENST00000523873 OR4C15Q8NGM1 316 aa11.3□□□□□ -0.6
VEGFA-224ENST00000523873 LIPHQ8WWY8 451 aa11.3□□□□□ -0.6
VEGFA-224ENST00000523873 KISS1RQ969F8 398 aaPredicted RBP11.3□□□□□ -0.6
VEGFA-224ENST00000523873 SLCO4A1Q96BD0 722 aa11.3□□□□□ -0.6
VEGFA-224ENST00000523873 ALPK1Q96QP1 1244 aa11.3□□□□□ -0.6
VEGFA-224ENST00000523873 TNFRSF13CQ96RJ3 184 aa11.3□□□□□ -0.6
VEGFA-224ENST00000523873 GPA33Q99795 319 aa11.3□□□□□ -0.6
VEGFA-224ENST00000523873 MED18Q9BUE0 208 aa11.3□□□□□ -0.6
VEGFA-224ENST00000523873 CHID1Q9BWS9 393 aa11.3□□□□□ -0.6
VEGFA-224ENST00000523873 ASB6Q9NWX5 421 aa11.3□□□□□ -0.6
VEGFA-224ENST00000523873 MALT1Q9UDY8 824 aa11.3□□□□□ -0.6
VEGFA-224ENST00000523873 RCE1Q9Y256 329 aa11.3□□□□□ -0.6
VEGFA-224ENST00000523873 GPR52Q9Y2T5 361 aa11.3□□□□□ -0.6
VEGFA-224ENST00000523873 LYVE1Q9Y5Y7 322 aa11.3□□□□□ -0.6
VEGFA-224ENST00000523873 A0A1W2PR80 420 aa11.29□□□□□ -0.6
VEGFA-224ENST00000523873 M0R3G1 203 aa11.29□□□□□ -0.6
VEGFA-224ENST00000523873 PDLIM1O00151 329 aa11.29□□□□□ -0.6
VEGFA-224ENST00000523873 CLOCKO15516 846 aa11.29□□□□□ -0.6
VEGFA-224ENST00000523873 OR10H3O60404 316 aa11.29□□□□□ -0.6
VEGFA-224ENST00000523873 SLC43A1O75387 559 aa11.29□□□□□ -0.6
VEGFA-224ENST00000523873 KRT33AO76009 404 aa11.29□□□□□ -0.6
VEGFA-224ENST00000523873 TSPAN19P0C672 248 aa11.29□□□□□ -0.6
VEGFA-224ENST00000523873 RAP2AP10114 183 aa11.29□□□□□ -0.6
VEGFA-224ENST00000523873 ZNF26P17031 533 aaPredicted RBP11.29□□□□□ -0.6
VEGFA-224ENST00000523873 CDH2P19022 906 aaPredicted RBP11.29□□□□□ -0.6
VEGFA-224ENST00000523873 SMIM11AP58511 58 aa11.29□□□□□ -0.6
VEGFA-224ENST00000523873 TLE4Q04727 773 aa11.29□□□□□ -0.6
VEGFA-224ENST00000523873 TOP3AQ13472 1001 aaPredicted RBP11.29□□□□□ -0.6
VEGFA-224ENST00000523873 P2RY6Q15077 328 aa11.29□□□□□ -0.6
VEGFA-224ENST00000523873 OR2T5Q6IEZ7 315 aa11.29□□□□□ -0.6
VEGFA-224ENST00000523873 TMPRSS11FQ6ZWK6 438 aa11.29□□□□□ -0.6
VEGFA-224ENST00000523873 ZER1Q7Z7L7 766 aa11.29□□□□□ -0.6
VEGFA-224ENST00000523873 WFDC8Q8IUA0 241 aa11.29□□□□□ -0.6
VEGFA-224ENST00000523873 LRRC75AQ8NAA5 344 aa11.29□□□□□ -0.6
VEGFA-224ENST00000523873 ANKK1Q8NFD2 765 aa11.29□□□□□ -0.6
VEGFA-224ENST00000523873 OR9Q2Q8NGE9 314 aa11.29□□□□□ -0.6
VEGFA-224ENST00000523873 OR2T29Q8NH02 315 aa11.29□□□□□ -0.6
VEGFA-224ENST00000523873 FAM222BQ8WU58 562 aa11.29□□□□□ -0.6
VEGFA-224ENST00000523873 ZNF837Q96EG3 531 aaPredicted RBP11.29□□□□□ -0.6
VEGFA-224ENST00000523873 MCCC2Q9HCC0 563 aa11.29□□□□□ -0.6
VEGFA-224ENST00000523873 FANCFQ9NPI8 374 aa11.29□□□□□ -0.6
VEGFA-224ENST00000523873 INIPQ9NRY2 104 aa11.29□□□□□ -0.6
VEGFA-224ENST00000523873 KCNN3Q9UGI6 736 aa11.29□□□□□ -0.6
VEGFA-224ENST00000523873 HIF3AQ9Y2N7 669 aa11.29□□□□□ -0.6
VEGFA-224ENST00000523873 U3KQV3 271 aa11.29□□□□□ -0.6
VEGFA-224ENST00000523873 CIB4A0PJX0 185 aa11.28□□□□□ -0.6
VEGFA-224ENST00000523873 ZNF726A6NNF4 738 aa11.28□□□□□ -0.6
VEGFA-224ENST00000523873 SIAH2O43255 324 aa11.28□□□□□ -0.6
VEGFA-224ENST00000523873 AKAP8O43823 692 aaKnown RBP11.28□□□□□ -0.6
VEGFA-224ENST00000523873 FKBP6O75344 327 aa11.28□□□□□ -0.6
VEGFA-224ENST00000523873 SEC14L2O76054 403 aa11.28□□□□□ -0.6
VEGFA-224ENST00000523873 CNOT4O95628 575 aaKnown RBP11.28□□□□□ -0.6
VEGFA-224ENST00000523873 EPXP11678 715 aa11.28□□□□□ -0.6
VEGFA-224ENST00000523873 PEX19P40855 299 aa11.28□□□□□ -0.6
VEGFA-224ENST00000523873 PCYT1AP49585 367 aa11.28□□□□□ -0.6
VEGFA-224ENST00000523873 IST1P53990 364 aa11.28□□□□□ -0.6
VEGFA-224ENST00000523873 KRTAP10-9P60411 292 aa11.28□□□□□ -0.6
VEGFA-224ENST00000523873 RPS4XP62701 263 aaKnown RBP11.28□□□□□ -0.6
VEGFA-224ENST00000523873 ROR2Q01974 943 aaKnown RBP11.28□□□□□ -0.6
VEGFA-224ENST00000523873 RUNX1T1Q06455 604 aa11.28□□□□□ -0.6
VEGFA-224ENST00000523873 CCNIQ14094 377 aa11.28□□□□□ -0.6
VEGFA-224ENST00000523873 TAB1Q15750 504 aa11.28□□□□□ -0.6
VEGFA-224ENST00000523873 STK11Q15831 433 aa11.28□□□□□ -0.6
VEGFA-224ENST00000523873 ALG10Q5BKT4 473 aa11.28□□□□□ -0.6
VEGFA-224ENST00000523873 C1orf146Q5VVC0 180 aa11.28□□□□□ -0.6
VEGFA-224ENST00000523873 OAFQ86UD1 273 aa11.28□□□□□ -0.6
VEGFA-224ENST00000523873 C20orf196Q8IYI0 205 aa11.28□□□□□ -0.6
VEGFA-224ENST00000523873 CDK20Q8IZL9 346 aa11.28□□□□□ -0.6
VEGFA-224ENST00000523873 POMGNT2Q8NAT1 580 aa11.28□□□□□ -0.6
VEGFA-224ENST00000523873 STEAP2Q8NFT2 490 aa11.28□□□□□ -0.6
VEGFA-224ENST00000523873 ASB10Q8WXI3 467 aa11.28□□□□□ -0.6
VEGFA-224ENST00000523873 RSRC1Q96IZ7 334 aaKnown RBP11.28□□□□□ -0.6
VEGFA-224ENST00000523873 DACH2Q96NX9 599 aa11.28□□□□□ -0.6
VEGFA-224ENST00000523873 LINC00470Q9BZP3 86 aa11.28□□□□□ -0.6
VEGFA-224ENST00000523873 MMADHCQ9H3L0 296 aaPredicted RBP11.28□□□□□ -0.6
VEGFA-224ENST00000523873 TAS2R16Q9NYV7 291 aa11.28□□□□□ -0.6
VEGFA-224ENST00000523873 NDRG3Q9UGV2 375 aa11.28□□□□□ -0.6
VEGFA-224ENST00000523873 TMCC3Q9ULS5 477 aa11.28□□□□□ -0.6
VEGFA-224ENST00000523873 TMEM5Q9Y2B1 443 aa11.28□□□□□ -0.6
VEGFA-224ENST00000523873 SAMHD1Q9Y3Z3 626 aaKnown RBP11.28□□□□□ -0.6
VEGFA-224ENST00000523873 A0A1W2PRG6 482 aa11.27□□□□□ -0.61
VEGFA-224ENST00000523873 UNC119BA6NIH7 251 aa11.27□□□□□ -0.61
VEGFA-224ENST00000523873 MCIDASD6RGH6 385 aa11.27□□□□□ -0.61
VEGFA-224ENST00000523873 ZNF587BE7ETH6 402 aa11.27□□□□□ -0.61
VEGFA-224ENST00000523873 KLF4O43474 513 aa11.27□□□□□ -0.61
VEGFA-224ENST00000523873 TIPRLO75663 272 aa11.27□□□□□ -0.61
VEGFA-224ENST00000523873 CIB2O75838 187 aa11.27□□□□□ -0.61
VEGFA-224ENST00000523873 BCL10O95999 233 aa11.27□□□□□ -0.61
VEGFA-224ENST00000523873 CST1P01037 141 aa11.27□□□□□ -0.61
VEGFA-224ENST00000523873 SLC9A3P48764 834 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms