RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 CBX1P83916 185 aa13.23□□□□□ -0.29
RNF4-210ENST00000508235 RPL18Q07020 188 aaKnown RBP13.23□□□□□ -0.29
RNF4-210ENST00000508235 ANKRD34AQ69YU3 496 aa13.23□□□□□ -0.29
RNF4-210ENST00000508235 TMPRSS11FQ6ZWK6 438 aa13.23□□□□□ -0.29
RNF4-210ENST00000508235 OAFQ86UD1 273 aa13.23□□□□□ -0.29
RNF4-210ENST00000508235 GPR137CQ8N3F9 429 aa13.23□□□□□ -0.29
RNF4-210ENST00000508235 ZNF433Q8N7K0 673 aaPredicted RBP13.23□□□□□ -0.29
RNF4-210ENST00000508235 OR52J3Q8NH60 311 aa13.23□□□□□ -0.29
RNF4-210ENST00000508235 S100PBPQ96BU1 408 aa13.23□□□□□ -0.29
RNF4-210ENST00000508235 LRR1Q96L50 414 aa13.23□□□□□ -0.29
RNF4-210ENST00000508235 OR2M2Q96R28 347 aa13.23□□□□□ -0.29
RNF4-210ENST00000508235 NGBQ9NPG2 151 aa13.23□□□□□ -0.29
RNF4-210ENST00000508235 B3GAT2Q9NPZ5 323 aa13.23□□□□□ -0.29
RNF4-210ENST00000508235 INIPQ9NRY2 104 aa13.23□□□□□ -0.29
RNF4-210ENST00000508235 STX18Q9P2W9 335 aaKnown RBP13.23□□□□□ -0.29
RNF4-210ENST00000508235 POMPQ9Y244 141 aa13.23□□□□□ -0.29
RNF4-210ENST00000508235 HIF3AQ9Y2N7 669 aa13.23□□□□□ -0.29
RNF4-210ENST00000508235 TRBV4-1A0A0J9YWV2 114 aa13.22□□□□□ -0.29
RNF4-210ENST00000508235 DHRS12A0PJE2 317 aa13.22□□□□□ -0.29
RNF4-210ENST00000508235 SLC35F4A4IF30 521 aa13.22□□□□□ -0.29
RNF4-210ENST00000508235 PDLIM1O00151 329 aa13.22□□□□□ -0.29
RNF4-210ENST00000508235 SERPINI2O75830 405 aa13.22□□□□□ -0.29
RNF4-210ENST00000508235 BCL10O95999 233 aa13.22□□□□□ -0.29
RNF4-210ENST00000508235 TSPAN19P0C672 248 aa13.22□□□□□ -0.29
RNF4-210ENST00000508235 IFNGR1P15260 489 aa13.22□□□□□ -0.29
RNF4-210ENST00000508235 FUT4P22083 530 aa13.22□□□□□ -0.29
RNF4-210ENST00000508235 CRYGSP22914 178 aa13.22□□□□□ -0.29
RNF4-210ENST00000508235 DAP3P51398 398 aaKnown RBP13.22□□□□□ -0.29
RNF4-210ENST00000508235 SH3BGRP55822 239 aaPredicted RBP13.22□□□□□ -0.29
RNF4-210ENST00000508235 BIDP55957 195 aa13.22□□□□□ -0.29
RNF4-210ENST00000508235 TIMM23BQ5SRD1 257 aa13.22□□□□□ -0.29
RNF4-210ENST00000508235 FBXW10Q5XX13 1052 aa13.22□□□□□ -0.29
RNF4-210ENST00000508235 HMBOX1Q6NT76 420 aa13.22□□□□□ -0.29
RNF4-210ENST00000508235 TBPL2Q6SJ96 375 aa13.22□□□□□ -0.29
RNF4-210ENST00000508235 SLC35D2Q76EJ3 337 aa13.22□□□□□ -0.29
RNF4-210ENST00000508235 SPATA24Q86W54 205 aa13.22□□□□□ -0.29
RNF4-210ENST00000508235 C17orf78Q8N4C9 275 aa13.22□□□□□ -0.29
RNF4-210ENST00000508235 LINC00471Q8N535 108 aa13.22□□□□□ -0.29
RNF4-210ENST00000508235 OR4K5Q8NGD3 323 aa13.22□□□□□ -0.29
RNF4-210ENST00000508235 OR6X1Q8NH79 312 aa13.22□□□□□ -0.29
RNF4-210ENST00000508235 MUCL1Q96DR8 90 aa13.22□□□□□ -0.29
RNF4-210ENST00000508235 ZC3HAV1LQ96H79 300 aaKnown RBP13.22□□□□□ -0.29
RNF4-210ENST00000508235 ALPK1Q96QP1 1244 aa13.22□□□□□ -0.29
RNF4-210ENST00000508235 YY1AP1Q9H869 796 aa13.22□□□□□ -0.29
RNF4-210ENST00000508235 MED29Q9NX70 200 aa13.22□□□□□ -0.29
RNF4-210ENST00000508235 SLC7A8Q9UHI5 535 aa13.22□□□□□ -0.29
RNF4-210ENST00000508235 AURKCQ9UQB9 309 aa13.22□□□□□ -0.29
RNF4-210ENST00000508235 SH3PXD2BA1X283 911 aa13.21□□□□□ -0.29
RNF4-210ENST00000508235 NPIPB13A6NJU9 1138 aa13.21□□□□□ -0.29
RNF4-210ENST00000508235 NPIPB4C9JG80 1138 aa13.21□□□□□ -0.29
RNF4-210ENST00000508235 MCIDASD6RGH6 385 aa13.21□□□□□ -0.29
RNF4-210ENST00000508235 RPL36A-HNRNPH2H7BZ11 118 aa13.21□□□□□ -0.29
RNF4-210ENST00000508235 RAD51DO75771 328 aa13.21□□□□□ -0.29
RNF4-210ENST00000508235 ITGA5P08648 1049 aa13.21□□□□□ -0.29
RNF4-210ENST00000508235 MAKP20794 623 aa13.21□□□□□ -0.29
RNF4-210ENST00000508235 HOXC12P31275 282 aa13.21□□□□□ -0.29
RNF4-210ENST00000508235 AQP2P41181 271 aa13.21□□□□□ -0.29
RNF4-210ENST00000508235 HMGA2P52926 109 aa13.21□□□□□ -0.29
RNF4-210ENST00000508235 RPS4XP62701 263 aaKnown RBP13.21□□□□□ -0.29
RNF4-210ENST00000508235 GK3PQ14409 553 aa13.21□□□□□ -0.29
RNF4-210ENST00000508235 TSC22D1Q15714 1073 aa13.21□□□□□ -0.29
RNF4-210ENST00000508235 ALG10Q5BKT4 473 aa13.21□□□□□ -0.29
RNF4-210ENST00000508235 NHLRC1Q6VVB1 395 aa13.21□□□□□ -0.29
RNF4-210ENST00000508235 TMEM200AQ86VY9 491 aa13.21□□□□□ -0.29
RNF4-210ENST00000508235 TMEM123Q8N131 208 aa13.21□□□□□ -0.29
RNF4-210ENST00000508235 OR6N1Q8NGY5 312 aa13.21□□□□□ -0.29
RNF4-210ENST00000508235 TXNDC15Q96J42 360 aa13.21□□□□□ -0.29
RNF4-210ENST00000508235 MUS81Q96NY9 551 aa13.21□□□□□ -0.29
RNF4-210ENST00000508235 ALKBH3Q96Q83 286 aaPredicted RBP13.21□□□□□ -0.29
RNF4-210ENST00000508235 FUZQ9BT04 418 aa13.21□□□□□ -0.29
RNF4-210ENST00000508235 ASH1LQ9NR48 2969 aaKnown RBP13.2□□□□□ -0.3
RNF4-210ENST00000508235 FAM221AA4D161 298 aa13.2□□□□□ -0.3
RNF4-210ENST00000508235 OR5H1A6NKK0 313 aa13.2□□□□□ -0.3
RNF4-210ENST00000508235 CENPBD1B2RD01 187 aa13.2□□□□□ -0.3
RNF4-210ENST00000508235 TNFRSF11BO00300 401 aa13.2□□□□□ -0.3
RNF4-210ENST00000508235 CLOCKO15516 846 aa13.2□□□□□ -0.3
RNF4-210ENST00000508235 UPK3AO75631 287 aa13.2□□□□□ -0.3
RNF4-210ENST00000508235 CTAG2O75638 210 aa13.2□□□□□ -0.3
RNF4-210ENST00000508235 F13BP05160 661 aa13.2□□□□□ -0.3
RNF4-210ENST00000508235 NR2C1P13056 603 aa13.2□□□□□ -0.3
RNF4-210ENST00000508235 PRF1P14222 555 aa13.2□□□□□ -0.3
RNF4-210ENST00000508235 PAX7P23759 505 aa13.2□□□□□ -0.3
RNF4-210ENST00000508235 GPR4P46093 362 aa13.2□□□□□ -0.3
RNF4-210ENST00000508235 OMPP47874 163 aa13.2□□□□□ -0.3
RNF4-210ENST00000508235 LSM11P83369 360 aaKnown RBP eCLIP13.2□□□□□ -0.3
RNF4-210ENST00000508235 ROR2Q01974 943 aaKnown RBP13.2□□□□□ -0.3
RNF4-210ENST00000508235 STK11Q15831 433 aa13.2□□□□□ -0.3
RNF4-210ENST00000508235 ZBED5Q49AG3 693 aa13.2□□□□□ -0.3
RNF4-210ENST00000508235 CARD17Q5XLA6 110 aa13.2□□□□□ -0.3
RNF4-210ENST00000508235 OR2T5Q6IEZ7 315 aa13.2□□□□□ -0.3
RNF4-210ENST00000508235 KLHL24Q6TFL4 600 aa13.2□□□□□ -0.3
RNF4-210ENST00000508235 C20orf196Q8IYI0 205 aa13.2□□□□□ -0.3
RNF4-210ENST00000508235 ADGRG5Q8IZF4 528 aa13.2□□□□□ -0.3
RNF4-210ENST00000508235 OR2T29Q8NH02 315 aa13.2□□□□□ -0.3
RNF4-210ENST00000508235 OR51A7Q8NH64 312 aa13.2□□□□□ -0.3
RNF4-210ENST00000508235 ZNF566Q969W8 418 aa13.2□□□□□ -0.3
RNF4-210ENST00000508235 SLC25A44Q96H78 314 aaPredicted RBP13.2□□□□□ -0.3
RNF4-210ENST00000508235 BOD1Q96IK1 185 aa13.2□□□□□ -0.3
RNF4-210ENST00000508235 FAM46AQ96IP4 442 aaKnown RBP13.2□□□□□ -0.3
RNF4-210ENST00000508235 EMC6Q9BV81 110 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms