RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 SLC25A1P53007 311 aa16.2■□□□□ 0.18
NUP54-205ENST00000507257 SCRN3Q0VDG4 424 aa16.2■□□□□ 0.18
NUP54-205ENST00000507257 HSPB2Q16082 182 aa16.2■□□□□ 0.18
NUP54-205ENST00000507257 MICBQ29980 383 aa16.2■□□□□ 0.18
NUP54-205ENST00000507257 ULK3Q6PHR2 472 aa16.2■□□□□ 0.18
NUP54-205ENST00000507257 RTL10Q7L3V2 364 aa16.2■□□□□ 0.18
NUP54-205ENST00000507257 SLC16A9Q7RTY1 509 aa16.2■□□□□ 0.18
NUP54-205ENST00000507257 C12orf40Q86WS4 652 aa16.2■□□□□ 0.18
NUP54-205ENST00000507257 TMPRSS12Q86WS5 348 aa16.2■□□□□ 0.18
NUP54-205ENST00000507257 ETFBKMTQ8IXQ9 262 aa16.2■□□□□ 0.18
NUP54-205ENST00000507257 ARMC10Q8N2F6 343 aa16.2■□□□□ 0.18
NUP54-205ENST00000507257 C12orf45Q8N5I9 185 aaPredicted RBP16.2■□□□□ 0.18
NUP54-205ENST00000507257 OR51S1Q8NGJ8 323 aa16.2■□□□□ 0.18
NUP54-205ENST00000507257 ZNRF4Q8WWF5 429 aa16.2■□□□□ 0.18
NUP54-205ENST00000507257 NXPE3Q969Y0 559 aa16.2■□□□□ 0.18
NUP54-205ENST00000507257 TSPAN10Q9H1Z9 355 aaPredicted RBP16.2■□□□□ 0.18
NUP54-205ENST00000507257 KIR3DX1Q9H7L2 352 aa16.2■□□□□ 0.18
NUP54-205ENST00000507257 SCPEP1Q9HB40 452 aa16.2■□□□□ 0.18
NUP54-205ENST00000507257 IL21RQ9HBE5 538 aa16.2■□□□□ 0.18
NUP54-205ENST00000507257 ADAP2Q9NPF8 381 aa16.2■□□□□ 0.18
NUP54-205ENST00000507257 MKKSQ9NPJ1 570 aaPredicted RBP16.2■□□□□ 0.18
NUP54-205ENST00000507257 EPHA6Q9UF33 1036 aa16.2■□□□□ 0.18
NUP54-205ENST00000507257 DAPP1Q9UN19 280 aa16.2■□□□□ 0.18
NUP54-205ENST00000507257 TNFSF18Q9UNG2 199 aa16.2■□□□□ 0.18
NUP54-205ENST00000507257 MOKQ9UQ07 419 aa16.2■□□□□ 0.18
NUP54-205ENST00000507257 SLC22A7Q9Y694 548 aa16.2■□□□□ 0.18
NUP54-205ENST00000507257 OR5K4A6NMS3 321 aa16.19■□□□□ 0.18
NUP54-205ENST00000507257 NKX2-2O95096 273 aa16.19■□□□□ 0.18
NUP54-205ENST00000507257 ADH1CP00326 375 aa16.19■□□□□ 0.18
NUP54-205ENST00000507257 ANXA2P07355 339 aaKnown RBP16.19■□□□□ 0.18
NUP54-205ENST00000507257 GTF2F2P13984 249 aa16.19■□□□□ 0.18
NUP54-205ENST00000507257 GPR143P51810 404 aa16.19■□□□□ 0.18
NUP54-205ENST00000507257 ACTBP60709 375 aa16.19■□□□□ 0.18
NUP54-205ENST00000507257 ACTG1P63261 375 aa16.19■□□□□ 0.18
NUP54-205ENST00000507257 GRM7Q14831 915 aa16.19■□□□□ 0.18
NUP54-205ENST00000507257 C4orf46Q504U0 113 aa16.19■□□□□ 0.18
NUP54-205ENST00000507257 GLT8D1Q68CQ7 371 aa16.19■□□□□ 0.18
NUP54-205ENST00000507257 RAB11FIP2Q7L804 512 aa16.19■□□□□ 0.18
NUP54-205ENST00000507257 OR5M8Q8NGP6 311 aa16.19■□□□□ 0.18
NUP54-205ENST00000507257 TM4SF19Q96DZ7 209 aa16.19■□□□□ 0.18
NUP54-205ENST00000507257 POTEKPQ9BYX7 375 aa16.19■□□□□ 0.18
NUP54-205ENST00000507257 SLC19A3Q9BZV2 496 aa16.19■□□□□ 0.18
NUP54-205ENST00000507257 GAREM1Q9H706 876 aa16.19■□□□□ 0.18
NUP54-205ENST00000507257 EXO5Q9H790 373 aa16.19■□□□□ 0.18
NUP54-205ENST00000507257 RXFP3Q9NSD7 469 aa16.19■□□□□ 0.18
NUP54-205ENST00000507257 DNAJB12Q9NXW2 375 aaKnown RBP16.19■□□□□ 0.18
NUP54-205ENST00000507257 SPHK1Q9NYA1 384 aa16.19■□□□□ 0.18
NUP54-205ENST00000507257 ACTR10Q9NZ32 417 aa16.19■□□□□ 0.18
NUP54-205ENST00000507257 ZNF107Q9UII5 783 aaPredicted RBP16.19■□□□□ 0.18
NUP54-205ENST00000507257 NOTCH4Q99466 2003 aa16.19■□□□□ 0.18
NUP54-205ENST00000507257 OR6C68A6NDL8 312 aa16.19■□□□□ 0.18
NUP54-205ENST00000507257 PRR32B1ATL7 298 aa16.19■□□□□ 0.18
NUP54-205ENST00000507257 IDSB3KWA1 339 aa16.19■□□□□ 0.18
NUP54-205ENST00000507257 ABHD16AO95870 558 aa16.19■□□□□ 0.18
NUP54-205ENST00000507257 PAN3Q58A45 887 aaKnown RBP16.19■□□□□ 0.18
NUP54-205ENST00000507257 STEAP1BQ6NZ63 245 aa16.19■□□□□ 0.18
NUP54-205ENST00000507257 MAMSTRQ6ZN01 415 aa16.19■□□□□ 0.18
NUP54-205ENST00000507257 PGAP1Q75T13 922 aa16.19■□□□□ 0.18
NUP54-205ENST00000507257 ZNF550Q7Z398 422 aa16.19■□□□□ 0.18
NUP54-205ENST00000507257 SVBPQ8N300 66 aa16.19■□□□□ 0.18
NUP54-205ENST00000507257 OR4D10Q8NGI6 311 aa16.19■□□□□ 0.18
NUP54-205ENST00000507257 GPX8Q8TED1 209 aa16.19■□□□□ 0.18
NUP54-205ENST00000507257 NMNAT3Q96T66 252 aa16.19■□□□□ 0.18
NUP54-205ENST00000507257 MNTQ99583 582 aa16.19■□□□□ 0.18
NUP54-205ENST00000507257 LYRM4Q9HD34 91 aa16.19■□□□□ 0.18
NUP54-205ENST00000507257 B3GALT2O43825 422 aa16.18■□□□□ 0.18
NUP54-205ENST00000507257 SRPX2O60687 465 aaPredicted RBP16.18■□□□□ 0.18
NUP54-205ENST00000507257 RHOP08100 348 aa16.18■□□□□ 0.18
NUP54-205ENST00000507257 SLC35G6P0C7Q6 338 aa16.18■□□□□ 0.18
NUP54-205ENST00000507257 HLA-GP17693 338 aa16.18■□□□□ 0.18
NUP54-205ENST00000507257 PRSS3P35030 304 aa16.18■□□□□ 0.18
NUP54-205ENST00000507257 ADH7P40394 386 aa16.18■□□□□ 0.18
NUP54-205ENST00000507257 MAGEB1P43366 347 aa16.18■□□□□ 0.18
NUP54-205ENST00000507257 PSMD4P55036 377 aaKnown RBP16.18■□□□□ 0.18
NUP54-205ENST00000507257 RPS4XP62701 263 aaKnown RBP16.18■□□□□ 0.18
NUP54-205ENST00000507257 SP3Q02447 781 aa16.18■□□□□ 0.18
NUP54-205ENST00000507257 C10orf91Q5T1B1 145 aa16.18■□□□□ 0.18
NUP54-205ENST00000507257 BEST3Q8N1M1 668 aa16.18■□□□□ 0.18
NUP54-205ENST00000507257 TMEM229BQ8NBD8 167 aa16.18■□□□□ 0.18
NUP54-205ENST00000507257 FAM117AQ9C073 453 aa16.18■□□□□ 0.18
NUP54-205ENST00000507257 FRRS1LQ9P0K9 344 aa16.18■□□□□ 0.18
NUP54-205ENST00000507257 ZMAT5Q9UDW3 170 aaKnown RBP16.18■□□□□ 0.18
NUP54-205ENST00000507257 TRPM6Q9BX84 2022 aa16.18■□□□□ 0.18
NUP54-205ENST00000507257 URADA6NGE7 173 aa16.17■□□□□ 0.18
NUP54-205ENST00000507257 IGLON5A6NGN9 336 aa16.17■□□□□ 0.18
NUP54-205ENST00000507257 NUDT19A8MXV4 375 aa16.17■□□□□ 0.18
NUP54-205ENST00000507257 DNAJB6O75190 326 aa16.17■□□□□ 0.18
NUP54-205ENST00000507257 FGF18O76093 207 aa16.17■□□□□ 0.18
NUP54-205ENST00000507257 PAK4O96013 591 aaPredicted RBP16.17■□□□□ 0.18
NUP54-205ENST00000507257 OR4E1P0C645 316 aa16.17■□□□□ 0.18
NUP54-205ENST00000507257 APEHP13798 732 aaKnown RBP16.17■□□□□ 0.18
NUP54-205ENST00000507257 ZNF10P21506 573 aaPredicted RBP16.17■□□□□ 0.18
NUP54-205ENST00000507257 TAS2R19P59542 299 aa16.17■□□□□ 0.18
NUP54-205ENST00000507257 UBE2MP61081 183 aaKnown RBP16.17■□□□□ 0.18
NUP54-205ENST00000507257 PPIAP62937 165 aaKnown RBP16.17■□□□□ 0.18
NUP54-205ENST00000507257 RUNX2Q13950 521 aa16.17■□□□□ 0.18
NUP54-205ENST00000507257 VWA2Q5GFL6 755 aa16.17■□□□□ 0.18
NUP54-205ENST00000507257 NKAIN2Q5VXU1 208 aa16.17■□□□□ 0.18
NUP54-205ENST00000507257 FIGNL1Q6PIW4 674 aa16.17■□□□□ 0.18
NUP54-205ENST00000507257 OR6K6Q8NGW6 343 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms