RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 P2RY4P51582 365 aa7.99□□□□□ -1.13
HDAC6-232ENST00000489053 SNRPD2P62316 118 aaKnown RBP7.99□□□□□ -1.13
HDAC6-232ENST00000489053 PPP2R2BQ00005 443 aa7.99□□□□□ -1.13
HDAC6-232ENST00000489053 LGALS3BPQ08380 585 aa7.99□□□□□ -1.13
HDAC6-232ENST00000489053 SPOCK1Q08629 439 aa7.99□□□□□ -1.13
HDAC6-232ENST00000489053 NPRL3Q12980 569 aa7.99□□□□□ -1.13
HDAC6-232ENST00000489053 CLEC12BQ2HXU8 276 aa7.99□□□□□ -1.13
HDAC6-232ENST00000489053 CYBRD1Q53TN4 286 aa7.99□□□□□ -1.13
HDAC6-232ENST00000489053 VHLLQ6RSH7 139 aa7.99□□□□□ -1.13
HDAC6-232ENST00000489053 CLEC2AQ6UVW9 174 aa7.99□□□□□ -1.13
HDAC6-232ENST00000489053 CCDC80Q76M96 950 aa7.99□□□□□ -1.13
HDAC6-232ENST00000489053 PXKQ7Z7A4 578 aa7.99□□□□□ -1.13
HDAC6-232ENST00000489053 CYP4Z1Q86W10 505 aa7.99□□□□□ -1.13
HDAC6-232ENST00000489053 LSRQ86X29 649 aaPredicted RBP7.99□□□□□ -1.13
HDAC6-232ENST00000489053 RBM45Q8IUH3 476 aaKnown RBP7.99□□□□□ -1.13
HDAC6-232ENST00000489053 MICU2Q8IYU8 434 aa7.99□□□□□ -1.13
HDAC6-232ENST00000489053 GPR32P1Q8NGA4 272 aa7.99□□□□□ -1.13
HDAC6-232ENST00000489053 FAM162AQ96A26 154 aa7.99□□□□□ -1.13
HDAC6-232ENST00000489053 MOGAT1Q96PD6 335 aa7.99□□□□□ -1.13
HDAC6-232ENST00000489053 OR2M2Q96R28 347 aa7.99□□□□□ -1.13
HDAC6-232ENST00000489053 HOPXQ9BPY8 73 aaPredicted RBP7.99□□□□□ -1.13
HDAC6-232ENST00000489053 EMC6Q9BV81 110 aa7.99□□□□□ -1.13
HDAC6-232ENST00000489053 CACNG6Q9BXT2 260 aa7.99□□□□□ -1.13
HDAC6-232ENST00000489053 AMBRA1Q9C0C7 1298 aa7.99□□□□□ -1.13
HDAC6-232ENST00000489053 GPR35Q9HC97 309 aa7.99□□□□□ -1.13
HDAC6-232ENST00000489053 CBLN4Q9NTU7 201 aa7.99□□□□□ -1.13
HDAC6-232ENST00000489053 ZNF701Q9NV72 531 aaPredicted RBP7.99□□□□□ -1.13
HDAC6-232ENST00000489053 ZNF229Q9UJW7 825 aa7.99□□□□□ -1.13
HDAC6-232ENST00000489053 USP22Q9UPT9 525 aa7.99□□□□□ -1.13
HDAC6-232ENST00000489053 MOKQ9UQ07 419 aa7.99□□□□□ -1.13
HDAC6-232ENST00000489053 SPEF1Q9Y4P9 236 aa7.99□□□□□ -1.13
HDAC6-232ENST00000489053 SLC35F4A4IF30 521 aa7.98□□□□□ -1.13
HDAC6-232ENST00000489053 ZNF99A8MXY4 864 aaPredicted RBP7.98□□□□□ -1.13
HDAC6-232ENST00000489053 E7EQL1 145 aa7.98□□□□□ -1.13
HDAC6-232ENST00000489053 BLOC1S5-TXNDC5H3BN57 136 aa7.98□□□□□ -1.13
HDAC6-232ENST00000489053 FXYD1O00168 92 aa7.98□□□□□ -1.13
HDAC6-232ENST00000489053 PLPP3O14495 311 aa7.98□□□□□ -1.13
HDAC6-232ENST00000489053 TRAF3IP2O43734 574 aaPredicted RBP7.98□□□□□ -1.13
HDAC6-232ENST00000489053 FARS2O95363 451 aaKnown RBP7.98□□□□□ -1.13
HDAC6-232ENST00000489053 RAB36O95755 333 aa7.98□□□□□ -1.13
HDAC6-232ENST00000489053 BCL10O95999 233 aa7.98□□□□□ -1.13
HDAC6-232ENST00000489053 IFNW1P05000 195 aa7.98□□□□□ -1.13
HDAC6-232ENST00000489053 DANCRP0C864 163 aa7.98□□□□□ -1.13
HDAC6-232ENST00000489053 NR2C1P13056 603 aa7.98□□□□□ -1.13
HDAC6-232ENST00000489053 IFNGR1P15260 489 aa7.98□□□□□ -1.13
HDAC6-232ENST00000489053 PAX1P15863 534 aa7.98□□□□□ -1.13
HDAC6-232ENST00000489053 APOBEC3AP31941 199 aaPredicted RBP7.98□□□□□ -1.13
HDAC6-232ENST00000489053 TTKP33981 857 aa7.98□□□□□ -1.13
HDAC6-232ENST00000489053 ARR3P36575 388 aa7.98□□□□□ -1.13
HDAC6-232ENST00000489053 RBM34P42696 430 aaKnown RBP7.98□□□□□ -1.13
HDAC6-232ENST00000489053 GUCA1AP43080 201 aaPredicted RBP7.98□□□□□ -1.13
HDAC6-232ENST00000489053 IDH3GP51553 393 aaPredicted RBP7.98□□□□□ -1.13
HDAC6-232ENST00000489053 SLC7A2P52569 658 aa7.98□□□□□ -1.13
HDAC6-232ENST00000489053 BIDP55957 195 aa7.98□□□□□ -1.13
HDAC6-232ENST00000489053 CLRN1P58418 232 aa7.98□□□□□ -1.13
HDAC6-232ENST00000489053 TUBA1BP68363 451 aa7.98□□□□□ -1.13
HDAC6-232ENST00000489053 TUBA4AP68366 448 aa7.98□□□□□ -1.13
HDAC6-232ENST00000489053 GALK2Q01415 458 aa7.98□□□□□ -1.13
HDAC6-232ENST00000489053 LIPEQ05469 1076 aa7.98□□□□□ -1.13
HDAC6-232ENST00000489053 CAMK2DQ13557 499 aa7.98□□□□□ -1.13
HDAC6-232ENST00000489053 TAF11Q15544 211 aa7.98□□□□□ -1.13
HDAC6-232ENST00000489053 ZNF74Q16587 644 aa7.98□□□□□ -1.13
HDAC6-232ENST00000489053 PGGHGQ32M88 737 aa7.98□□□□□ -1.13
HDAC6-232ENST00000489053 GKAP1Q5VSY0 366 aaPredicted RBP7.98□□□□□ -1.13
HDAC6-232ENST00000489053 CGB2Q6NT52 195 aa7.98□□□□□ -1.13
HDAC6-232ENST00000489053 ZNF813Q6ZN06 617 aa7.98□□□□□ -1.13
HDAC6-232ENST00000489053 Q71RC1 249 aaPredicted RBP7.98□□□□□ -1.13
HDAC6-232ENST00000489053 TUBA1AQ71U36 451 aa7.98□□□□□ -1.13
HDAC6-232ENST00000489053 FKBP9P1Q75LS8 142 aa7.98□□□□□ -1.13
HDAC6-232ENST00000489053 SLC35D2Q76EJ3 337 aa7.98□□□□□ -1.13
HDAC6-232ENST00000489053 RRM2BQ7LG56 351 aa7.98□□□□□ -1.13
HDAC6-232ENST00000489053 SLC46A3Q7Z3Q1 461 aa7.98□□□□□ -1.13
HDAC6-232ENST00000489053 CALHM3Q86XJ0 350 aa7.98□□□□□ -1.13
HDAC6-232ENST00000489053 CDK20Q8IZL9 346 aa7.98□□□□□ -1.13
HDAC6-232ENST00000489053 WDR31Q8NA23 367 aa7.98□□□□□ -1.13
HDAC6-232ENST00000489053 OR4F15Q8NGB8 312 aa7.98□□□□□ -1.13
HDAC6-232ENST00000489053 LILRB1Q8NHL6 650 aaPredicted RBP7.98□□□□□ -1.13
HDAC6-232ENST00000489053 MAGEE2Q8TD90 523 aaPredicted RBP7.98□□□□□ -1.13
HDAC6-232ENST00000489053 BCL2L2Q92843 193 aaPredicted RBP7.98□□□□□ -1.13
HDAC6-232ENST00000489053 ZNF566Q969W8 418 aa7.98□□□□□ -1.13
HDAC6-232ENST00000489053 FBXO17Q96EF6 278 aa7.98□□□□□ -1.13
HDAC6-232ENST00000489053 SGTBQ96EQ0 304 aa7.98□□□□□ -1.13
HDAC6-232ENST00000489053 COX4I2Q96KJ9 171 aa7.98□□□□□ -1.13
HDAC6-232ENST00000489053 KCTD14Q9BQ13 255 aaPredicted RBP7.98□□□□□ -1.13
HDAC6-232ENST00000489053 ELAC2Q9BQ52 826 aaKnown RBP7.98□□□□□ -1.13
HDAC6-232ENST00000489053 RHNO1Q9BSD3 238 aa7.98□□□□□ -1.13
HDAC6-232ENST00000489053 TRAF4Q9BUZ4 470 aaPredicted RBP7.98□□□□□ -1.13
HDAC6-232ENST00000489053 FNDC11Q9BVV2 318 aa7.98□□□□□ -1.13
HDAC6-232ENST00000489053 GSX1Q9H4S2 264 aaPredicted RBP7.98□□□□□ -1.13
HDAC6-232ENST00000489053 MED29Q9NX70 200 aa7.98□□□□□ -1.13
HDAC6-232ENST00000489053 B3GAT1Q9P2W7 334 aa7.98□□□□□ -1.13
HDAC6-232ENST00000489053 STX18Q9P2W9 335 aaKnown RBP7.98□□□□□ -1.13
HDAC6-232ENST00000489053 RIMS3Q9UJD0 308 aa7.98□□□□□ -1.13
HDAC6-232ENST00000489053 MED31Q9Y3C7 131 aa7.98□□□□□ -1.13
HDAC6-232ENST00000489053 FKBP7Q9Y680 259 aa7.98□□□□□ -1.13
HDAC6-232ENST00000489053 MED13LQ71F56 2210 aa7.98□□□□□ -1.13
HDAC6-232ENST00000489053 NSD1Q96L73 2696 aaPredicted RBP7.97□□□□□ -1.13
HDAC6-232ENST00000489053 TLN2Q9Y4G6 2542 aa7.97□□□□□ -1.13
HDAC6-232ENST00000489053 USF3Q68DE3 2245 aa7.97□□□□□ -1.13
HDAC6-232ENST00000489053 ARPC4-TTLL3A0A0A6YYG9 625 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms