RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, human

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC6-223	ENST00000480525		A0A1W2PRG6	482 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	TUBAL3	A6NHL2	446 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	OR5H1	A6NKK0	313 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	ENO4	A6NNW6	628 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	ZNF99	A8MXY4	864 aa	Predicted RBP	4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	PRSS44	E7EML9	344 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525		J3QW42	95 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	PTP4A3	O75365	173 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	SLC43A1	O75387	559 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	AKR7A3	O95154	331 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	NDUFB2	O95178	105 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	OR6A2	O95222	327 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	ADA	P00813	363 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	IGHG1	P01857	330 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	HIST1H2AB	P04908	130 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	PGA4	P0DJD7	388 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	PGA3	P0DJD8	388 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	ANXA8	P13928	327 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	COX6B1	P14854	86 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	POU2F1	P14859	743 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	NCK1	P16333	377 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	FUT1	P19526	365 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	NPR2	P20594	1047 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	DNAJA1	P31689	397 aa	Known RBP	4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	CCKAR	P32238	428 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	KIR2DL3	P43628	341 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	OR1E2	P47887	323 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	PTDSS1	P48651	473 aa	Known RBP	4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	UGT2B15	P54855	530 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	HOXC5	Q00444	222 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	POU3F1	Q03052	451 aa	Predicted RBP	4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	LTB	Q06643	244 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	RPL18	Q07020	188 aa	Known RBP	4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	PMS2P3	Q13401	168 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	FHL1	Q13642	323 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	CDSN	Q15517	529 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	MICA	Q29983	383 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	ZBED5	Q49AG3	693 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	BEX5	Q5H9J7	111 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	THEM4	Q5T1C6	240 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	ARMC4	Q5T2S8	1044 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	SP5	Q6BEB4	398 aa	Predicted RBP	4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	C3P1	Q6ZMU1	363 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	ZNF730	Q6ZMV8	503 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	DPY19L2P2	Q6ZN68	376 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	RASSF6	Q6ZTQ3	369 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	FOXL2NB	Q6ZUU3	175 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	RHOU	Q7L0Q8	258 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	HIST3H2A	Q7L7L0	130 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	AAED1	Q7RTV5	226 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	FAM122B	Q7Z309	247 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	SYT9	Q86SS6	491 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	OAF	Q86UD1	273 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	CCDC71	Q8IV32	467 aa	Predicted RBP	4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	NKAIN4	Q8IVV8	208 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	NRM	Q8IXM6	262 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	C20orf196	Q8IYI0	205 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	RNF148	Q8N7C7	305 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	ZNF433	Q8N7K0	673 aa	Predicted RBP	4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	FAM86B1	Q8N7N1	296 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	ARIH2OS	Q8N7S6	290 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	CNEP1R1	Q8N9A8	125 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	LRRC75A	Q8NAA5	344 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	IL17RD	Q8NFM7	739 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	OR4K5	Q8NGD3	323 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	OR4C15	Q8NGM1	316 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	VANGL1	Q8TAA9	524 aa	Predicted RBP	4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	TMEM255B	Q8WV15	326 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	HIST1H2AC	Q93077	130 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	KISS1R	Q969F8	398 aa	Predicted RBP	4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	TMEM54	Q969K7	222 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	NMD3	Q96D46	503 aa	Known RBP	4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	CLPTM1L	Q96KA5	538 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	RAB3IP	Q96QF0	476 aa	Predicted RBP	4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	ALPK1	Q96QP1	1244 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	OR2M2	Q96R28	347 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	KCNK17	Q96T54	332 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	TMEM204	Q9BSN7	226 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	C1orf198	Q9H425	327 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	REEP1	Q9H902	201 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	MCCC2	Q9HCC0	563 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	B3GAT2	Q9NPZ5	323 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	C8orf4	Q9NR00	106 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	DNAJB9	Q9UBS3	223 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	SH3BGRL2	Q9UJC5	107 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	TMCC3	Q9ULS5	477 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	MGAT4B	Q9UQ53	548 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	SIGLEC7	Q9Y286	467 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	HRNR	Q86YZ3	2850 aa	Predicted RBP	4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	CCDC168	Q8NDH2	2452 aa		4.49	□□□□□ -1.69
HDAC6-223	ENST00000480525	PRRC2A	P48634	2157 aa	Known RBP	4.48	□□□□□ -1.69
HDAC6-223	ENST00000480525	MYO9A	B2RTY4	2548 aa		4.48	□□□□□ -1.69
HDAC6-223	ENST00000480525	CHD3	Q12873	2000 aa	Known RBP	4.48	□□□□□ -1.69
HDAC6-223	ENST00000480525	SH3D21	A4FU49	640 aa		4.48	□□□□□ -1.69
HDAC6-223	ENST00000480525		A6NNC1	897 aa		4.48	□□□□□ -1.69
HDAC6-223	ENST00000480525	EFCAB9	A8MZ26	197 aa		4.48	□□□□□ -1.69
HDAC6-223	ENST00000480525	EEF1E1-BLOC1S5	C9J1V9	151 aa		4.48	□□□□□ -1.69
HDAC6-223	ENST00000480525	ZNF587B	E7ETH6	402 aa		4.48	□□□□□ -1.69
HDAC6-223	ENST00000480525	EEF1E1	O43324	174 aa	Known RBP	4.48	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms