RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 ZNF641Q96N77 438 aaPredicted RBP5.88□□□□□ -1.47
GAPVD1-217ENST00000479511 NAT10Q9H0A0 1025 aaKnown RBP5.88□□□□□ -1.47
GAPVD1-217ENST00000479511 ZNF696Q9H7X3 374 aa5.88□□□□□ -1.47
GAPVD1-217ENST00000479511 NHEJ1Q9H9Q4 299 aaPredicted RBP5.88□□□□□ -1.47
GAPVD1-217ENST00000479511 B3GNT2Q9NY97 397 aa5.88□□□□□ -1.47
GAPVD1-217ENST00000479511 WARS2Q9UGM6 360 aaKnown RBP5.88□□□□□ -1.47
GAPVD1-217ENST00000479511 PHF11Q9UIL8 331 aa5.88□□□□□ -1.47
GAPVD1-217ENST00000479511 ZDBF2Q9HCK1 2354 aa5.88□□□□□ -1.47
GAPVD1-217ENST00000479511 TRBV11-1A0A0K0K1C0 115 aa5.87□□□□□ -1.47
GAPVD1-217ENST00000479511 GFYI3L273 518 aa5.87□□□□□ -1.47
GAPVD1-217ENST00000479511 OR2J3O76001 311 aa5.87□□□□□ -1.47
GAPVD1-217ENST00000479511 GNA14O95837 355 aa5.87□□□□□ -1.47
GAPVD1-217ENST00000479511 OTCP00480 354 aa5.87□□□□□ -1.47
GAPVD1-217ENST00000479511 IGLV1-44P01699 117 aa5.87□□□□□ -1.47
GAPVD1-217ENST00000479511 HSPD1P10809 573 aaKnown RBP5.87□□□□□ -1.47
GAPVD1-217ENST00000479511 CPN2P22792 545 aa5.87□□□□□ -1.47
GAPVD1-217ENST00000479511 ANOS1P23352 680 aa5.87□□□□□ -1.47
GAPVD1-217ENST00000479511 OTX1P32242 354 aaPredicted RBP5.87□□□□□ -1.47
GAPVD1-217ENST00000479511 STARP49675 285 aa5.87□□□□□ -1.47
GAPVD1-217ENST00000479511 ARHGDIBP52566 201 aa5.87□□□□□ -1.47
GAPVD1-217ENST00000479511 ERVPABLB-1P60509 514 aa5.87□□□□□ -1.47
GAPVD1-217ENST00000479511 IRF8Q02556 426 aa5.87□□□□□ -1.47
GAPVD1-217ENST00000479511 MECOMQ03112 1051 aa5.87□□□□□ -1.47
GAPVD1-217ENST00000479511 CYLC2Q14093 348 aaPredicted RBP5.87□□□□□ -1.47
GAPVD1-217ENST00000479511 CNPY1Q3B7I2 92 aa5.87□□□□□ -1.47
GAPVD1-217ENST00000479511 PQLC3Q8N755 202 aa5.87□□□□□ -1.47
GAPVD1-217ENST00000479511 PAQR8Q8TEZ7 354 aa5.87□□□□□ -1.47
GAPVD1-217ENST00000479511 IFT74Q96LB3 600 aa5.87□□□□□ -1.47
GAPVD1-217ENST00000479511 TEKT3Q9BXF9 490 aa5.87□□□□□ -1.47
GAPVD1-217ENST00000479511 ANKRD60Q9BZ19 345 aa5.87□□□□□ -1.47
GAPVD1-217ENST00000479511 PEF1Q9UBV8 284 aaKnown RBP5.87□□□□□ -1.47
GAPVD1-217ENST00000479511 SAMD4AQ9UPU9 718 aaKnown RBP5.87□□□□□ -1.47
GAPVD1-217ENST00000479511 LTBP2Q14767 1821 aa5.87□□□□□ -1.47
GAPVD1-217ENST00000479511 FRMPD3Q5JV73 1810 aa5.87□□□□□ -1.47
GAPVD1-217ENST00000479511 MAST2Q6P0Q8 1798 aa5.86□□□□□ -1.47
GAPVD1-217ENST00000479511 GOLGA6L4A6NEF3 574 aa5.86□□□□□ -1.47
GAPVD1-217ENST00000479511 IDSB3KWA1 339 aa5.86□□□□□ -1.47
GAPVD1-217ENST00000479511 E9PLD3 99 aa5.86□□□□□ -1.47
GAPVD1-217ENST00000479511 H3BQV1 296 aa5.86□□□□□ -1.47
GAPVD1-217ENST00000479511 PES1O00541 588 aaKnown RBP5.86□□□□□ -1.47
GAPVD1-217ENST00000479511 CLOCKO15516 846 aa5.86□□□□□ -1.47
GAPVD1-217ENST00000479511 C1orf105O95561 183 aa5.86□□□□□ -1.47
GAPVD1-217ENST00000479511 POP4O95707 220 aaKnown RBP5.86□□□□□ -1.47
GAPVD1-217ENST00000479511 ERCC1P07992 297 aaPredicted RBP5.86□□□□□ -1.47
GAPVD1-217ENST00000479511 COX5AP20674 150 aa5.86□□□□□ -1.47
GAPVD1-217ENST00000479511 APOBEC3HQ6NTF7 200 aaKnown RBP5.86□□□□□ -1.47
GAPVD1-217ENST00000479511 HSDL2Q6YN16 418 aa5.86□□□□□ -1.47
GAPVD1-217ENST00000479511 ZNF589Q86UQ0 364 aaPredicted RBP5.86□□□□□ -1.47
GAPVD1-217ENST00000479511 CATSPER3Q86XQ3 398 aa5.86□□□□□ -1.47
GAPVD1-217ENST00000479511 MTURNQ8N3F0 131 aa5.86□□□□□ -1.47
GAPVD1-217ENST00000479511 BEST4Q8NFU0 473 aa5.86□□□□□ -1.47
GAPVD1-217ENST00000479511 FAM151AQ8WW52 585 aa5.86□□□□□ -1.47
GAPVD1-217ENST00000479511 KIFAP3Q92845 792 aa5.86□□□□□ -1.47
GAPVD1-217ENST00000479511 OXGR1Q96P68 337 aa5.86□□□□□ -1.47
GAPVD1-217ENST00000479511 GSDMAQ96QA5 445 aa5.86□□□□□ -1.47
GAPVD1-217ENST00000479511 ILKAPQ9H0C8 392 aaPredicted RBP5.86□□□□□ -1.47
GAPVD1-217ENST00000479511 ZSCAN16Q9H4T2 348 aaPredicted RBP5.86□□□□□ -1.47
GAPVD1-217ENST00000479511 NIPAL2Q9H841 368 aa5.86□□□□□ -1.47
GAPVD1-217ENST00000479511 CAB39LQ9H9S4 337 aa5.86□□□□□ -1.47
GAPVD1-217ENST00000479511 ASIC3Q9UHC3 531 aa5.86□□□□□ -1.47
GAPVD1-217ENST00000479511 CFAP45Q9UL16 551 aa5.86□□□□□ -1.47
GAPVD1-217ENST00000479511 MRPL11Q9Y3B7 192 aaKnown RBP5.86□□□□□ -1.47
GAPVD1-217ENST00000479511 BDP1A6H8Y1 2624 aa5.86□□□□□ -1.47
GAPVD1-217ENST00000479511 PCSK5Q92824 1860 aa5.85□□□□□ -1.47
GAPVD1-217ENST00000479511 CNTNAP2Q9UHC6 1331 aa5.85□□□□□ -1.47
GAPVD1-217ENST00000479511 ERICH2A1L162 156 aa5.85□□□□□ -1.47
GAPVD1-217ENST00000479511 CCT8L1PA6NM43 557 aa5.85□□□□□ -1.47
GAPVD1-217ENST00000479511 ZNF705EA8MWA4 302 aaPredicted RBP5.85□□□□□ -1.47
GAPVD1-217ENST00000479511 E7EWF7 191 aa5.85□□□□□ -1.47
GAPVD1-217ENST00000479511 G3V3Y1 287 aa5.85□□□□□ -1.47
GAPVD1-217ENST00000479511 SULT2B1O00204 365 aa5.85□□□□□ -1.47
GAPVD1-217ENST00000479511 SOCS3O14543 225 aa5.85□□□□□ -1.47
GAPVD1-217ENST00000479511 GPAA1O43292 621 aa5.85□□□□□ -1.47
GAPVD1-217ENST00000479511 LATO43561 262 aa5.85□□□□□ -1.47
GAPVD1-217ENST00000479511 LGI1O95970 557 aa5.85□□□□□ -1.47
GAPVD1-217ENST00000479511 TPM1P09493 284 aa5.85□□□□□ -1.47
GAPVD1-217ENST00000479511 SYT1P21579 422 aa5.85□□□□□ -1.47
GAPVD1-217ENST00000479511 OXTRP30559 389 aa5.85□□□□□ -1.47
GAPVD1-217ENST00000479511 YWHABP31946 246 aaKnown RBP5.85□□□□□ -1.47
GAPVD1-217ENST00000479511 KCNJ2P63252 427 aa5.85□□□□□ -1.47
GAPVD1-217ENST00000479511 CD300CQ08708 224 aa5.85□□□□□ -1.47
GAPVD1-217ENST00000479511 TCP10Q12799 353 aa5.85□□□□□ -1.47
GAPVD1-217ENST00000479511 ALX1Q15699 326 aa5.85□□□□□ -1.47
GAPVD1-217ENST00000479511 LTB4RQ15722 352 aa5.85□□□□□ -1.47
GAPVD1-217ENST00000479511 GLYR1Q49A26 553 aaPredicted RBP5.85□□□□□ -1.47
GAPVD1-217ENST00000479511 VWA2Q5GFL6 755 aa5.85□□□□□ -1.47
GAPVD1-217ENST00000479511 OR4K14Q8NGD5 310 aa5.85□□□□□ -1.47
GAPVD1-217ENST00000479511 OR13F1Q8NGS4 319 aa5.85□□□□□ -1.47
GAPVD1-217ENST00000479511 OR4Q3Q8NH05 313 aa5.85□□□□□ -1.47
GAPVD1-217ENST00000479511 ZPLD1Q8TCW7 415 aa5.85□□□□□ -1.47
GAPVD1-217ENST00000479511 GLYATL2Q8WU03 294 aa5.85□□□□□ -1.47
GAPVD1-217ENST00000479511 GTF3AQ92664 365 aaKnown RBP5.85□□□□□ -1.47
GAPVD1-217ENST00000479511 MRPS31Q92665 395 aaKnown RBP5.85□□□□□ -1.47
GAPVD1-217ENST00000479511 MS4A14Q96JA4 679 aa5.85□□□□□ -1.47
GAPVD1-217ENST00000479511 ZNF597Q96LX8 424 aa5.85□□□□□ -1.47
GAPVD1-217ENST00000479511 PRRC1Q96M27 445 aa5.85□□□□□ -1.47
GAPVD1-217ENST00000479511 ZNF578Q96N58 590 aaPredicted RBP5.85□□□□□ -1.47
GAPVD1-217ENST00000479511 OPN3Q9H1Y3 402 aaPredicted RBP5.85□□□□□ -1.47
GAPVD1-217ENST00000479511 SMYD3Q9H7B4 428 aa5.85□□□□□ -1.47
GAPVD1-217ENST00000479511 C20orf96Q9NUD7 363 aaPredicted RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms