RNA–Protein interactions for RNA: ENST00000475997.6

HNRNPU-208, Transcript of heterogeneous nuclear ribonucleoprotein U, human

TSL 5

Gene HNRNPU, Length 5,290 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPU-208	ENST00000475997	CNN3	Q15417	329 aa	Known RBP	5.67	□□□□□ -1.5
HNRNPU-208	ENST00000475997	SOWAHC	Q53LP3	525 aa	Predicted RBP	5.67	□□□□□ -1.5
HNRNPU-208	ENST00000475997	ZNF805	Q5CZA5	627 aa		5.67	□□□□□ -1.5
HNRNPU-208	ENST00000475997	IGSF11	Q5DX21	431 aa		5.67	□□□□□ -1.5
HNRNPU-208	ENST00000475997	VIT	Q6UXI7	678 aa		5.67	□□□□□ -1.5
HNRNPU-208	ENST00000475997	ZNF836	Q6ZNA1	936 aa		5.67	□□□□□ -1.5
HNRNPU-208	ENST00000475997	VASH1	Q7L8A9	365 aa	Predicted RBP	5.67	□□□□□ -1.5
HNRNPU-208	ENST00000475997	ADGRF3	Q8IZF5	1079 aa		5.67	□□□□□ -1.5
HNRNPU-208	ENST00000475997	LRRC25	Q8N386	305 aa	Predicted RBP	5.67	□□□□□ -1.5
HNRNPU-208	ENST00000475997	SLC24A4	Q8NFF2	622 aa		5.67	□□□□□ -1.5
HNRNPU-208	ENST00000475997	BPIFC	Q8NFQ6	507 aa		5.67	□□□□□ -1.5
HNRNPU-208	ENST00000475997	OR8J2	Q8NGG1	315 aa		5.67	□□□□□ -1.5
HNRNPU-208	ENST00000475997	ADAMTS18	Q8TE60	1221 aa		5.67	□□□□□ -1.5
HNRNPU-208	ENST00000475997	SLC35B4	Q969S0	331 aa		5.67	□□□□□ -1.5
HNRNPU-208	ENST00000475997	ISG20	Q96AZ6	181 aa	Known RBP	5.67	□□□□□ -1.5
HNRNPU-208	ENST00000475997	ECHDC3	Q96DC8	303 aa		5.67	□□□□□ -1.5
HNRNPU-208	ENST00000475997	SORCS2	Q96PQ0	1159 aa		5.67	□□□□□ -1.5
HNRNPU-208	ENST00000475997	VAMP8	Q9BV40	100 aa		5.67	□□□□□ -1.5
HNRNPU-208	ENST00000475997	MCOLN1	Q9GZU1	580 aa		5.67	□□□□□ -1.5
HNRNPU-208	ENST00000475997	CHRD	Q9H2X0	955 aa		5.67	□□□□□ -1.5
HNRNPU-208	ENST00000475997	SPHK2	Q9NRA0	654 aa		5.67	□□□□□ -1.5
HNRNPU-208	ENST00000475997	C1GALT1	Q9NS00	363 aa		5.67	□□□□□ -1.5
HNRNPU-208	ENST00000475997	MED17	Q9NVC6	651 aa		5.67	□□□□□ -1.5
HNRNPU-208	ENST00000475997	EHF	Q9NZC4	300 aa		5.67	□□□□□ -1.5
HNRNPU-208	ENST00000475997	KLHL42	Q9P2K6	505 aa		5.67	□□□□□ -1.5
HNRNPU-208	ENST00000475997	CYB5R1	Q9UHQ9	305 aa		5.67	□□□□□ -1.5
HNRNPU-208	ENST00000475997	TMEFF2	Q9UIK5	374 aa	Predicted RBP	5.67	□□□□□ -1.5
HNRNPU-208	ENST00000475997	BTNL2	Q9UIR0	455 aa		5.67	□□□□□ -1.5
HNRNPU-208	ENST00000475997	SLC6A14	Q9UN76	642 aa		5.67	□□□□□ -1.5
HNRNPU-208	ENST00000475997	BOLA1	Q9Y3E2	137 aa		5.67	□□□□□ -1.5
HNRNPU-208	ENST00000475997	PIKFYVE	Q9Y2I7	2098 aa		5.67	□□□□□ -1.5
HNRNPU-208	ENST00000475997	CACNA1C	Q13936	2221 aa		5.67	□□□□□ -1.5
HNRNPU-208	ENST00000475997		K7EQM0	130 aa		5.67	□□□□□ -1.5
HNRNPU-208	ENST00000475997		M0R143	59 aa		5.67	□□□□□ -1.5
HNRNPU-208	ENST00000475997	GFRA2	O00451	464 aa		5.67	□□□□□ -1.5
HNRNPU-208	ENST00000475997	TGM5	O43548	720 aa		5.67	□□□□□ -1.5
HNRNPU-208	ENST00000475997	FGF18	O76093	207 aa		5.67	□□□□□ -1.5
HNRNPU-208	ENST00000475997	C8orf89	P0DMQ9	161 aa		5.67	□□□□□ -1.5
HNRNPU-208	ENST00000475997	RFC3	P40938	356 aa		5.67	□□□□□ -1.5
HNRNPU-208	ENST00000475997	RFX2	P48378	723 aa		5.67	□□□□□ -1.5
HNRNPU-208	ENST00000475997	KCNJ5	P48544	419 aa		5.67	□□□□□ -1.5
HNRNPU-208	ENST00000475997	EMP2	P54851	167 aa		5.67	□□□□□ -1.5
HNRNPU-208	ENST00000475997	CTXN1	P60606	82 aa		5.67	□□□□□ -1.5
HNRNPU-208	ENST00000475997	FXN	Q16595	210 aa		5.67	□□□□□ -1.5
HNRNPU-208	ENST00000475997	MEP1B	Q16820	701 aa		5.67	□□□□□ -1.5
HNRNPU-208	ENST00000475997	OR52W1	Q6IF63	320 aa		5.67	□□□□□ -1.5
HNRNPU-208	ENST00000475997	IL34	Q6ZMJ4	242 aa		5.67	□□□□□ -1.5
HNRNPU-208	ENST00000475997	LIX1L	Q8IVB5	337 aa		5.67	□□□□□ -1.5
HNRNPU-208	ENST00000475997	CCDC116	Q8IYX3	515 aa		5.67	□□□□□ -1.5
HNRNPU-208	ENST00000475997	KDF1	Q8NAX2	398 aa	Predicted RBP	5.67	□□□□□ -1.5
HNRNPU-208	ENST00000475997	SUMF1	Q8NBK3	374 aa		5.67	□□□□□ -1.5
HNRNPU-208	ENST00000475997	OR56B1	Q8NGI3	324 aa		5.67	□□□□□ -1.5
HNRNPU-208	ENST00000475997	DYNC2LI1	Q8TCX1	351 aa		5.67	□□□□□ -1.5
HNRNPU-208	ENST00000475997	ANKRD9	Q96BM1	317 aa	Predicted RBP	5.67	□□□□□ -1.5
HNRNPU-208	ENST00000475997	GNPNAT1	Q96EK6	184 aa	Predicted RBP	5.67	□□□□□ -1.5
HNRNPU-208	ENST00000475997	ELF4	Q99607	663 aa	Predicted RBP	5.67	□□□□□ -1.5
HNRNPU-208	ENST00000475997	DOK1	Q99704	481 aa		5.67	□□□□□ -1.5
HNRNPU-208	ENST00000475997	C11orf54	Q9H0W9	315 aa	Predicted RBP	5.67	□□□□□ -1.5
HNRNPU-208	ENST00000475997	SLC52A3	Q9NQ40	469 aa		5.67	□□□□□ -1.5
HNRNPU-208	ENST00000475997	SLC35D1	Q9NTN3	355 aa		5.67	□□□□□ -1.5
HNRNPU-208	ENST00000475997	HCFC1R1	Q9NWW0	138 aa		5.67	□□□□□ -1.5
HNRNPU-208	ENST00000475997	KCNG2	Q9UJ96	466 aa		5.67	□□□□□ -1.5
HNRNPU-208	ENST00000475997	VSTM2B	A6NLU5	285 aa		5.66	□□□□□ -1.5
HNRNPU-208	ENST00000475997	UMAD1	C9J7I0	102 aa		5.66	□□□□□ -1.5
HNRNPU-208	ENST00000475997	ZNF207	O43670	478 aa	Known RBP	5.66	□□□□□ -1.5
HNRNPU-208	ENST00000475997	UGDH	O60701	494 aa		5.66	□□□□□ -1.5
HNRNPU-208	ENST00000475997	GPR37L1	O60883	481 aa		5.66	□□□□□ -1.5
HNRNPU-208	ENST00000475997	IL33	O95760	270 aa		5.66	□□□□□ -1.5
HNRNPU-208	ENST00000475997	H2AFB1	P0C5Y9	115 aa		5.66	□□□□□ -1.5
HNRNPU-208	ENST00000475997	CT45A6	P0DMU7	189 aa		5.66	□□□□□ -1.5
HNRNPU-208	ENST00000475997	CT45A5	P0DMU8	189 aa		5.66	□□□□□ -1.5
HNRNPU-208	ENST00000475997	CT45A7	P0DMV0	189 aa		5.66	□□□□□ -1.5
HNRNPU-208	ENST00000475997	CT45A8	P0DMV1	189 aa		5.66	□□□□□ -1.5
HNRNPU-208	ENST00000475997	CT45A9	P0DMV2	189 aa		5.66	□□□□□ -1.5
HNRNPU-208	ENST00000475997	PNMT	P11086	282 aa		5.66	□□□□□ -1.5
HNRNPU-208	ENST00000475997	IRF2	P14316	349 aa		5.66	□□□□□ -1.5
HNRNPU-208	ENST00000475997	PTAFR	P25105	342 aa		5.66	□□□□□ -1.5
HNRNPU-208	ENST00000475997	P2RX3	P56373	397 aa		5.66	□□□□□ -1.5
HNRNPU-208	ENST00000475997	TPPP2	P59282	170 aa		5.66	□□□□□ -1.5
HNRNPU-208	ENST00000475997	PFN3	P60673	137 aa		5.66	□□□□□ -1.5
HNRNPU-208	ENST00000475997	RPS18	P62269	152 aa	Known RBP	5.66	□□□□□ -1.5
HNRNPU-208	ENST00000475997	BDH1	Q02338	343 aa		5.66	□□□□□ -1.5
HNRNPU-208	ENST00000475997	GLO1	Q04760	184 aa		5.66	□□□□□ -1.5
HNRNPU-208	ENST00000475997	ASAH1	Q13510	395 aa		5.66	□□□□□ -1.5
HNRNPU-208	ENST00000475997	CTF1	Q16619	201 aa		5.66	□□□□□ -1.5
HNRNPU-208	ENST00000475997	LEXM	Q3ZCV2	418 aa		5.66	□□□□□ -1.5
HNRNPU-208	ENST00000475997	CT45A2	Q5DJT8	189 aa		5.66	□□□□□ -1.5
HNRNPU-208	ENST00000475997	CT45A1	Q5HYN5	189 aa		5.66	□□□□□ -1.5
HNRNPU-208	ENST00000475997	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	5.66	□□□□□ -1.5
HNRNPU-208	ENST00000475997	COX20	Q5RI15	118 aa		5.66	□□□□□ -1.5
HNRNPU-208	ENST00000475997	SLC46A3	Q7Z3Q1	461 aa		5.66	□□□□□ -1.5
HNRNPU-208	ENST00000475997	PPP1R3B	Q86XI6	285 aa		5.66	□□□□□ -1.5
HNRNPU-208	ENST00000475997	TCTEX1D1	Q8N7M0	179 aa		5.66	□□□□□ -1.5
HNRNPU-208	ENST00000475997	ZNF740	Q8NDX6	193 aa		5.66	□□□□□ -1.5
HNRNPU-208	ENST00000475997	CT45A3	Q8NHU0	189 aa		5.66	□□□□□ -1.5
HNRNPU-208	ENST00000475997	LMX1A	Q8TE12	382 aa		5.66	□□□□□ -1.5
HNRNPU-208	ENST00000475997	ZNF480	Q8WV37	535 aa		5.66	□□□□□ -1.5
HNRNPU-208	ENST00000475997	HRASLS5	Q96KN8	279 aa		5.66	□□□□□ -1.5
HNRNPU-208	ENST00000475997	SAMD8	Q96LT4	415 aa		5.66	□□□□□ -1.5
HNRNPU-208	ENST00000475997	UBL7	Q96S82	380 aa	Predicted RBP	5.66	□□□□□ -1.5

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