RNA–Protein interactions for RNA: ENST00000473177.1

LRCH3-214, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 520 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-214ENST00000473177 HOXD4P09016 255 aaPredicted RBP4.48□□□□□ -1.69
LRCH3-214ENST00000473177 CSF1P09603 554 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 UBBP0CG47 229 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 UBCP0CG48 685 aaKnown RBP4.48□□□□□ -1.69
LRCH3-214ENST00000473177 LIMS3P0CW19 117 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 LIMS4P0CW20 117 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 CALCBP10092 127 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 IRF1P10914 325 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 SRCP12931 536 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 ZNF8P17098 575 aaPredicted RBP4.48□□□□□ -1.69
LRCH3-214ENST00000473177 ELK1P19419 428 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 ACP1P24666 158 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 GIFP27352 417 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 MAT2AP31153 395 aaKnown RBP4.48□□□□□ -1.69
LRCH3-214ENST00000473177 PRKAR1BP31321 381 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 EVI2BP34910 448 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 MPIP34949 423 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 RBM34P42696 430 aaKnown RBP4.48□□□□□ -1.69
LRCH3-214ENST00000473177 RGRP47804 291 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 STARP49675 285 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 CCR8P51685 355 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 MVDP53602 400 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 CRYBA2P53672 197 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 SNRPD2P62316 118 aaKnown RBP4.48□□□□□ -1.69
LRCH3-214ENST00000473177 RPS27AP62979 156 aaKnown RBP4.48□□□□□ -1.69
LRCH3-214ENST00000473177 UBA52P62987 128 aaKnown RBP4.48□□□□□ -1.69
LRCH3-214ENST00000473177 EIF5AP63241 154 aaKnown RBP4.48□□□□□ -1.69
LRCH3-214ENST00000473177 CTAG1AP78358 180 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 RAE1P78406 368 aaKnown RBP4.48□□□□□ -1.69
LRCH3-214ENST00000473177 POU6F2P78424 691 aaPredicted RBP4.48□□□□□ -1.69
LRCH3-214ENST00000473177 SLC7A9P82251 487 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 STX4Q12846 297 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 MRPL49Q13405 166 aaKnown RBP4.48□□□□□ -1.69
LRCH3-214ENST00000473177 GAB1Q13480 694 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 GK2Q14410 553 aaPredicted RBP4.48□□□□□ -1.69
LRCH3-214ENST00000473177 GRM7Q14831 915 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 ZNF169Q14929 603 aaPredicted RBP4.48□□□□□ -1.69
LRCH3-214ENST00000473177 CDKN3Q16667 212 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 LGALSLQ3ZCW2 172 aaPredicted RBP4.48□□□□□ -1.69
LRCH3-214ENST00000473177 ATP13A5Q4VNC0 1218 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 Q5BKY6 102 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 NHLRC3Q5JS37 347 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 EIF5AL1Q6IS14 154 aaKnown RBP4.48□□□□□ -1.69
LRCH3-214ENST00000473177 LPCAT3Q6P1A2 487 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 SFXN4Q6P4A7 337 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 FAM111BQ6SJ93 734 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 CLEC18BQ6UXF7 455 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 TFAP2EQ6VUC0 442 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 GDPD4Q6W3E5 623 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 ASB18Q6ZVZ8 466 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 WDR53Q7Z5U6 358 aaPredicted RBP4.48□□□□□ -1.69
LRCH3-214ENST00000473177 CEACAM19Q7Z692 300 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 TSEN54Q7Z6J9 526 aaKnown RBP4.48□□□□□ -1.69
LRCH3-214ENST00000473177 TMPRSS11BQ86T26 416 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 TMEM25Q86YD3 366 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 SYS1Q8N2H4 156 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 C10orf111Q8N326 155 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 FTMTQ8N4E7 242 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 ARL14Q8N4G2 192 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 POMGNT2Q8NAT1 580 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 CLEC18CQ8NCF0 446 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 OR4K1Q8NGD4 311 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 OR4C6Q8NH72 309 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 BRIX1Q8TDN6 353 aaKnown RBP4.48□□□□□ -1.69
LRCH3-214ENST00000473177 SAP25Q8TEE9 199 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 ST8SIA4Q92187 359 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 CNOT9Q92600 299 aaKnown RBP4.48□□□□□ -1.69
LRCH3-214ENST00000473177 PTP4A1Q93096 173 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 RELTQ969Z4 430 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 RBM18Q96H35 190 aaKnown RBP4.48□□□□□ -1.69
LRCH3-214ENST00000473177 TMEM19Q96HH6 336 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 C10orf90Q96M02 699 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 C12orf66Q96MD2 445 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 BBS4Q96RK4 519 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 CD180Q99467 661 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 TREX2Q9BQ50 279 aaPredicted RBP4.48□□□□□ -1.69
LRCH3-214ENST00000473177 GINS4Q9BRT9 223 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 TCEAL7Q9BRU2 100 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 RAB11FIP5Q9BXF6 653 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 TM6SF2Q9BZW4 377 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 SLCO5A1Q9H2Y9 848 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 RERGLQ9H628 205 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 MTHFD2LQ9H903 347 aaPredicted RBP4.48□□□□□ -1.69
LRCH3-214ENST00000473177 GALNT9Q9HCQ5 603 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 TMEM138Q9NPI0 162 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 ASCL3Q9NQ33 180 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 BIN3Q9NQY0 253 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 LANCL2Q9NS86 450 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 TMEM184CQ9NVA4 438 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 SDHAF2Q9NX18 166 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 HAO2Q9NYQ3 351 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 PLA2G3Q9NZ20 509 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 COMMD9Q9P000 198 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 TRPC4Q9UBN4 977 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 RPS6KB2Q9UBS0 482 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 NDRG3Q9UGV2 375 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 FBXW2Q9UKT8 454 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 GPR34Q9UPC5 381 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 PRELID3BQ9Y3B1 194 aa4.48□□□□□ -1.69
LRCH3-214ENST00000473177 PRSS21Q9Y6M0 314 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms