RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 GPR137CQ8N3F9 429 aa11.32□□□□□ -0.6
COL5A1-206ENST00000465877 ANKK1Q8NFD2 765 aa11.32□□□□□ -0.6
COL5A1-206ENST00000465877 KBTBD8Q8NFY9 601 aa11.32□□□□□ -0.6
COL5A1-206ENST00000465877 OR1K1Q8NGR3 316 aa11.32□□□□□ -0.6
COL5A1-206ENST00000465877 BCAS4Q8TDM0 211 aa11.32□□□□□ -0.6
COL5A1-206ENST00000465877 SGTBQ96EQ0 304 aa11.32□□□□□ -0.6
COL5A1-206ENST00000465877 HS6ST2Q96MM7 605 aa11.32□□□□□ -0.6
COL5A1-206ENST00000465877 MUS81Q96NY9 551 aa11.32□□□□□ -0.6
COL5A1-206ENST00000465877 CDRT15Q96T59 188 aa11.32□□□□□ -0.6
COL5A1-206ENST00000465877 EMC6Q9BV81 110 aa11.32□□□□□ -0.6
COL5A1-206ENST00000465877 FNDC11Q9BVV2 318 aa11.32□□□□□ -0.6
COL5A1-206ENST00000465877 GORASP2Q9H8Y8 452 aa11.32□□□□□ -0.6
COL5A1-206ENST00000465877 SLC17A5Q9NRA2 495 aa11.32□□□□□ -0.6
COL5A1-206ENST00000465877 DCAF13Q9NV06 445 aaKnown RBP11.32□□□□□ -0.6
COL5A1-206ENST00000465877 RHCGQ9UBD6 479 aa11.32□□□□□ -0.6
COL5A1-206ENST00000465877 AMDHD2Q9Y303 409 aa11.32□□□□□ -0.6
COL5A1-206ENST00000465877 ENPP4Q9Y6X5 453 aa11.32□□□□□ -0.6
COL5A1-206ENST00000465877 PLCE1Q9P212 2302 aa11.32□□□□□ -0.6
COL5A1-206ENST00000465877 SLC35F4A4IF30 521 aa11.31□□□□□ -0.6
COL5A1-206ENST00000465877 FFAR1O14842 300 aa11.31□□□□□ -0.6
COL5A1-206ENST00000465877 CLOCKO15516 846 aa11.31□□□□□ -0.6
COL5A1-206ENST00000465877 CD3EP07766 207 aa11.31□□□□□ -0.6
COL5A1-206ENST00000465877 IFNGR1P15260 489 aa11.31□□□□□ -0.6
COL5A1-206ENST00000465877 MSX2P35548 267 aaPredicted RBP11.31□□□□□ -0.6
COL5A1-206ENST00000465877 ART1P52961 327 aa11.31□□□□□ -0.6
COL5A1-206ENST00000465877 ROR2Q01974 943 aaKnown RBP11.31□□□□□ -0.6
COL5A1-206ENST00000465877 RPL18Q07020 188 aaKnown RBP11.31□□□□□ -0.6
COL5A1-206ENST00000465877 ZP4Q12836 540 aa11.31□□□□□ -0.6
COL5A1-206ENST00000465877 MELKQ14680 651 aa11.31□□□□□ -0.6
COL5A1-206ENST00000465877 TRAM2Q15035 370 aa11.31□□□□□ -0.6
COL5A1-206ENST00000465877 TBRG1Q3YBR2 411 aa11.31□□□□□ -0.6
COL5A1-206ENST00000465877 SPATS1Q496A3 300 aa11.31□□□□□ -0.6
COL5A1-206ENST00000465877 CARD17Q5XLA6 110 aa11.31□□□□□ -0.6
COL5A1-206ENST00000465877 HMBOX1Q6NT76 420 aa11.31□□□□□ -0.6
COL5A1-206ENST00000465877 ADAM5Q6NVV9 412 aa11.31□□□□□ -0.6
COL5A1-206ENST00000465877 C20orf204Q6ZNR8 217 aa11.31□□□□□ -0.6
COL5A1-206ENST00000465877 CYP4Z1Q86W10 505 aa11.31□□□□□ -0.6
COL5A1-206ENST00000465877 NRMQ8IXM6 262 aa11.31□□□□□ -0.6
COL5A1-206ENST00000465877 NSL1Q96IY1 281 aa11.31□□□□□ -0.6
COL5A1-206ENST00000465877 NSMCE2Q96MF7 247 aa11.31□□□□□ -0.6
COL5A1-206ENST00000465877 NELFAQ9H3P2 528 aa11.31□□□□□ -0.6
COL5A1-206ENST00000465877 TAS2R5Q9NYW4 299 aa11.31□□□□□ -0.6
COL5A1-206ENST00000465877 HEATR1Q9H583 2144 aaKnown RBP11.3□□□□□ -0.6
COL5A1-206ENST00000465877 B2RBV5 119 aa11.3□□□□□ -0.6
COL5A1-206ENST00000465877 BLOC1S5-TXNDC5H3BN57 136 aa11.3□□□□□ -0.6
COL5A1-206ENST00000465877 RPL36A-HNRNPH2H7BZ11 118 aa11.3□□□□□ -0.6
COL5A1-206ENST00000465877 hCG_2039718K7EN88 272 aa11.3□□□□□ -0.6
COL5A1-206ENST00000465877 M0R3G1 203 aa11.3□□□□□ -0.6
COL5A1-206ENST00000465877 ABCD4O14678 606 aa11.3□□□□□ -0.6
COL5A1-206ENST00000465877 SEMG1P04279 462 aa11.3□□□□□ -0.6
COL5A1-206ENST00000465877 HIST1H2ABP04908 130 aa11.3□□□□□ -0.6
COL5A1-206ENST00000465877 IFI30P13284 250 aa11.3□□□□□ -0.6
COL5A1-206ENST00000465877 CD53P19397 219 aa11.3□□□□□ -0.6
COL5A1-206ENST00000465877 ATP6V1B2P21281 511 aa11.3□□□□□ -0.6
COL5A1-206ENST00000465877 ZNF83P51522 516 aa11.3□□□□□ -0.6
COL5A1-206ENST00000465877 BIDP55957 195 aa11.3□□□□□ -0.6
COL5A1-206ENST00000465877 RPS4XP62701 263 aaKnown RBP11.3□□□□□ -0.6
COL5A1-206ENST00000465877 LSM11P83369 360 aaKnown RBP eCLIP11.3□□□□□ -0.6
COL5A1-206ENST00000465877 VLDLRP98155 873 aa11.3□□□□□ -0.6
COL5A1-206ENST00000465877 SPOCK1Q08629 439 aa11.3□□□□□ -0.6
COL5A1-206ENST00000465877 CAMK2DQ13557 499 aa11.3□□□□□ -0.6
COL5A1-206ENST00000465877 TESK1Q15569 626 aa11.3□□□□□ -0.6
COL5A1-206ENST00000465877 ACKR1Q16570 336 aa11.3□□□□□ -0.6
COL5A1-206ENST00000465877 CEACAM16Q2WEN9 425 aa11.3□□□□□ -0.6
COL5A1-206ENST00000465877 PHYHD1Q5SRE7 291 aa11.3□□□□□ -0.6
COL5A1-206ENST00000465877 NHLRC1Q6VVB1 395 aa11.3□□□□□ -0.6
COL5A1-206ENST00000465877 SLC35D2Q76EJ3 337 aa11.3□□□□□ -0.6
COL5A1-206ENST00000465877 HIST3H2AQ7L7L0 130 aa11.3□□□□□ -0.6
COL5A1-206ENST00000465877 TSEN54Q7Z6J9 526 aaKnown RBP11.3□□□□□ -0.6
COL5A1-206ENST00000465877 WDR31Q8NA23 367 aa11.3□□□□□ -0.6
COL5A1-206ENST00000465877 LIPHQ8WWY8 451 aa11.3□□□□□ -0.6
COL5A1-206ENST00000465877 ACOT11Q8WXI4 607 aaPredicted RBP11.3□□□□□ -0.6
COL5A1-206ENST00000465877 HIST1H2ACQ93077 130 aa11.3□□□□□ -0.6
COL5A1-206ENST00000465877 MBD6Q96DN6 1003 aa11.3□□□□□ -0.6
COL5A1-206ENST00000465877 BPIFA2Q96DR5 249 aa11.3□□□□□ -0.6
COL5A1-206ENST00000465877 BOD1Q96IK1 185 aa11.3□□□□□ -0.6
COL5A1-206ENST00000465877 TXNDC15Q96J42 360 aa11.3□□□□□ -0.6
COL5A1-206ENST00000465877 ADAD1Q96M93 576 aaKnown RBP11.3□□□□□ -0.6
COL5A1-206ENST00000465877 ALPK1Q96QP1 1244 aa11.3□□□□□ -0.6
COL5A1-206ENST00000465877 CCL19Q99731 98 aa11.3□□□□□ -0.6
COL5A1-206ENST00000465877 FOXC2Q99958 501 aa11.3□□□□□ -0.6
COL5A1-206ENST00000465877 ANKRD19PQ9H560 264 aa11.3□□□□□ -0.6
COL5A1-206ENST00000465877 CRLF2Q9HC73 371 aa11.3□□□□□ -0.6
COL5A1-206ENST00000465877 GPR35Q9HC97 309 aa11.3□□□□□ -0.6
COL5A1-206ENST00000465877 B3GAT2Q9NPZ5 323 aa11.3□□□□□ -0.6
COL5A1-206ENST00000465877 NDUFAF4Q9P032 175 aa11.3□□□□□ -0.6
COL5A1-206ENST00000465877 MAGED1Q9Y5V3 778 aaPredicted RBP11.3□□□□□ -0.6
COL5A1-206ENST00000465877 HIVEP1P15822 2718 aa11.3□□□□□ -0.6
COL5A1-206ENST00000465877 FLNAP21333 2647 aaKnown RBP11.3□□□□□ -0.6
COL5A1-206ENST00000465877 DPRXA6NFQ7 191 aa11.29□□□□□ -0.6
COL5A1-206ENST00000465877 ZNF726A6NNF4 738 aa11.29□□□□□ -0.6
COL5A1-206ENST00000465877 M0R1B8 84 aa11.29□□□□□ -0.6
COL5A1-206ENST00000465877 HS3ST1O14792 307 aa11.29□□□□□ -0.6
COL5A1-206ENST00000465877 SEC14L2O76054 403 aa11.29□□□□□ -0.6
COL5A1-206ENST00000465877 TSPAN19P0C672 248 aa11.29□□□□□ -0.6
COL5A1-206ENST00000465877 T-ENOLP0DO92 83 aa11.29□□□□□ -0.6
COL5A1-206ENST00000465877 SAGP10523 405 aaPredicted RBP11.29□□□□□ -0.6
COL5A1-206ENST00000465877 FUT1P19526 365 aa11.29□□□□□ -0.6
COL5A1-206ENST00000465877 CSNK1A1P48729 337 aa11.29□□□□□ -0.6
COL5A1-206ENST00000465877 CDH11P55287 796 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms