RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 OR5T3Q8NGG3 340 aa17.08■□□□□ 0.33
PTPA-223ENST00000452489 F2RL3Q96RI0 385 aa17.08■□□□□ 0.33
PTPA-223ENST00000452489 MICU1Q9BPX6 476 aa17.08■□□□□ 0.33
PTPA-223ENST00000452489 TEX101Q9BY14 249 aa17.08■□□□□ 0.33
PTPA-223ENST00000452489 GAR1Q9NY12 217 aaKnown RBP17.08■□□□□ 0.33
PTPA-223ENST00000452489 TIMM10BQ9Y5J6 103 aa17.08■□□□□ 0.33
PTPA-223ENST00000452489 TRIP12Q14669 1992 aaPredicted RBP17.08■□□□□ 0.33
PTPA-223ENST00000452489 FOXE1O00358 373 aaPredicted RBP17.08■□□□□ 0.32
PTPA-223ENST00000452489 PRKXP51817 358 aa17.08■□□□□ 0.32
PTPA-223ENST00000452489 RSU1Q15404 277 aa17.08■□□□□ 0.32
PTPA-223ENST00000452489 NR0B2Q15466 257 aa17.08■□□□□ 0.32
PTPA-223ENST00000452489 USF2Q15853 346 aaPredicted RBP17.08■□□□□ 0.32
PTPA-223ENST00000452489 UBAC2Q8NBM4 344 aa17.08■□□□□ 0.32
PTPA-223ENST00000452489 OR56A3Q8NH54 315 aa17.08■□□□□ 0.32
PTPA-223ENST00000452489 GPBAR1Q8TDU6 330 aa17.08■□□□□ 0.32
PTPA-223ENST00000452489 CAMK1GQ96NX5 476 aa17.08■□□□□ 0.32
PTPA-223ENST00000452489 NEUROD4Q9HD90 331 aa17.08■□□□□ 0.32
PTPA-223ENST00000452489 STEAP1Q9UHE8 339 aa17.08■□□□□ 0.32
PTPA-223ENST00000452489 GXYLT2A0PJZ3 443 aa17.07■□□□□ 0.32
PTPA-223ENST00000452489 OR2AG2A6NM03 316 aa17.07■□□□□ 0.32
PTPA-223ENST00000452489 FAM157AC9JC47 383 aa17.07■□□□□ 0.32
PTPA-223ENST00000452489 BHLHE40O14503 412 aa17.07■□□□□ 0.32
PTPA-223ENST00000452489 G0S2P27469 103 aa17.07■□□□□ 0.32
PTPA-223ENST00000452489 TEAD1P28347 426 aa17.07■□□□□ 0.32
PTPA-223ENST00000452489 EPHB3P54753 998 aa17.07■□□□□ 0.32
PTPA-223ENST00000452489 ZNF280AP59817 542 aaPredicted RBP17.07■□□□□ 0.32
PTPA-223ENST00000452489 SIRPAP78324 504 aa17.07■□□□□ 0.32
PTPA-223ENST00000452489 LCTLQ6UWM7 567 aa17.07■□□□□ 0.32
PTPA-223ENST00000452489 CCDC107Q8WV48 283 aa17.07■□□□□ 0.32
PTPA-223ENST00000452489 SECTM1Q8WVN6 248 aa17.07■□□□□ 0.32
PTPA-223ENST00000452489 MRPL37Q9BZE1 423 aaKnown RBP17.07■□□□□ 0.32
PTPA-223ENST00000452489 ZDHHC8Q9ULC8 765 aa17.07■□□□□ 0.32
PTPA-223ENST00000452489 KCNE3Q9Y6H6 103 aa17.07■□□□□ 0.32
PTPA-223ENST00000452489 ATP1B2P14415 290 aaPredicted RBP17.07■□□□□ 0.32
PTPA-223ENST00000452489 SRSF4Q08170 494 aaKnown RBP17.07■□□□□ 0.32
PTPA-223ENST00000452489 VGLL4Q14135 290 aa17.07■□□□□ 0.32
PTPA-223ENST00000452489 KIAA0141Q14154 515 aaPredicted RBP17.07■□□□□ 0.32
PTPA-223ENST00000452489 ZNF792Q3KQV3 632 aa17.07■□□□□ 0.32
PTPA-223ENST00000452489 PRAMEF17Q5VTA0 474 aa17.07■□□□□ 0.32
PTPA-223ENST00000452489 GDF7Q7Z4P5 450 aa17.07■□□□□ 0.32
PTPA-223ENST00000452489 ZNF280BQ86YH2 543 aa17.07■□□□□ 0.32
PTPA-223ENST00000452489 ZNF511Q8NB15 262 aa17.07■□□□□ 0.32
PTPA-223ENST00000452489 TFGQ92734 400 aaPredicted RBP17.07■□□□□ 0.32
PTPA-223ENST00000452489 PPM1DO15297 605 aa17.06■□□□□ 0.32
PTPA-223ENST00000452489 CD5P06127 495 aa17.06■□□□□ 0.32
PTPA-223ENST00000452489 SNRPCP09234 159 aaKnown RBP17.06■□□□□ 0.32
PTPA-223ENST00000452489 NDUFA6P56556 154 aa17.06■□□□□ 0.32
PTPA-223ENST00000452489 TBPL1P62380 186 aa17.06■□□□□ 0.32
PTPA-223ENST00000452489 DECR1Q16698 335 aa17.06■□□□□ 0.32
PTPA-223ENST00000452489 DLK2Q6UY11 383 aa17.06■□□□□ 0.32
PTPA-223ENST00000452489 MBOAT2Q6ZWT7 520 aa17.06■□□□□ 0.32
PTPA-223ENST00000452489 C1QTNF2Q9BXJ5 285 aa17.06■□□□□ 0.32
PTPA-223ENST00000452489 CYTL1Q9NRR1 136 aa17.06■□□□□ 0.32
PTPA-223ENST00000452489 PARPBPQ9NWS1 579 aa17.06■□□□□ 0.32
PTPA-223ENST00000452489 GNG8Q9UK08 70 aa17.06■□□□□ 0.32
PTPA-223ENST00000452489 IGLV3-16A0A075B6K0 115 aa17.06■□□□□ 0.32
PTPA-223ENST00000452489 H7BY64 318 aa17.06■□□□□ 0.32
PTPA-223ENST00000452489 KIAA0355O15063 1070 aa17.06■□□□□ 0.32
PTPA-223ENST00000452489 NPC1O15118 1278 aa17.06■□□□□ 0.32
PTPA-223ENST00000452489 ZNF208O43345 1280 aa17.06■□□□□ 0.32
PTPA-223ENST00000452489 HCKP08631 526 aa17.06■□□□□ 0.32
PTPA-223ENST00000452489 LPAR6P43657 344 aa17.06■□□□□ 0.32
PTPA-223ENST00000452489 ID4P47928 161 aa17.06■□□□□ 0.32
PTPA-223ENST00000452489 PKIAP61925 76 aa17.06■□□□□ 0.32
PTPA-223ENST00000452489 DHCR24Q15392 516 aa17.06■□□□□ 0.32
PTPA-223ENST00000452489 THSD4Q6ZMP0 1018 aa17.06■□□□□ 0.32
PTPA-223ENST00000452489 INSM2Q96T92 566 aaPredicted RBP17.06■□□□□ 0.32
PTPA-223ENST00000452489 ACTRT3Q9BYD9 372 aa17.06■□□□□ 0.32
PTPA-223ENST00000452489 ZCCHC3Q9NUD5 404 aaKnown RBP17.06■□□□□ 0.32
PTPA-223ENST00000452489 SLC13A4Q9UKG4 626 aa17.06■□□□□ 0.32
PTPA-223ENST00000452489 SLC35A3Q9Y2D2 325 aa17.06■□□□□ 0.32
PTPA-223ENST00000452489 M0R036 132 aa17.05■□□□□ 0.32
PTPA-223ENST00000452489 MFNGO00587 321 aa17.05■□□□□ 0.32
PTPA-223ENST00000452489 HLA-AP01891 365 aaKnown RBP17.05■□□□□ 0.32
PTPA-223ENST00000452489 PCBP4P57723 403 aaKnown RBP17.05■□□□□ 0.32
PTPA-223ENST00000452489 RAB4BP61018 213 aa17.05■□□□□ 0.32
PTPA-223ENST00000452489 AGERQ15109 404 aa17.05■□□□□ 0.32
PTPA-223ENST00000452489 OR8G1Q15617 311 aa17.05■□□□□ 0.32
PTPA-223ENST00000452489 ACTBL2Q562R1 376 aa17.05■□□□□ 0.32
PTPA-223ENST00000452489 LRRC73Q5JTD7 316 aa17.05■□□□□ 0.32
PTPA-223ENST00000452489 STEAP1BQ6NZ63 245 aa17.05■□□□□ 0.32
PTPA-223ENST00000452489 UNQ9370/PRO34162Q6UXP9 181 aa17.05■□□□□ 0.32
PTPA-223ENST00000452489 FRRS1Q6ZNA5 592 aa17.05■□□□□ 0.32
PTPA-223ENST00000452489 CBARPQ8N350 705 aaPredicted RBP17.05■□□□□ 0.32
PTPA-223ENST00000452489 SUN3Q8TAQ9 357 aa17.05■□□□□ 0.32
PTPA-223ENST00000452489 POM121Q96HA1 1249 aa17.05■□□□□ 0.32
PTPA-223ENST00000452489 KIRREL1Q96J84 757 aa17.05■□□□□ 0.32
PTPA-223ENST00000452489 TP53TG5Q9Y2B4 290 aa17.05■□□□□ 0.32
PTPA-223ENST00000452489 CBY1Q9Y3M2 126 aa17.05■□□□□ 0.32
PTPA-223ENST00000452489 CASP8AP2Q9UKL3 1982 aa17.05■□□□□ 0.32
PTPA-223ENST00000452489 A0A1W2PPE2 198 aa17.05■□□□□ 0.32
PTPA-223ENST00000452489 M0QYG6 137 aa17.05■□□□□ 0.32
PTPA-223ENST00000452489 MAN2B1O00754 1011 aa17.05■□□□□ 0.32
PTPA-223ENST00000452489 PAPLNO95428 1278 aa17.05■□□□□ 0.32
PTPA-223ENST00000452489 KLKB1P03952 638 aa17.05■□□□□ 0.32
PTPA-223ENST00000452489 RPN2P04844 631 aa17.05■□□□□ 0.32
PTPA-223ENST00000452489 NPPBP16860 134 aa17.05■□□□□ 0.32
PTPA-223ENST00000452489 HTRA3P83110 453 aa17.05■□□□□ 0.32
PTPA-223ENST00000452489 TMEM115Q12893 351 aaPredicted RBP17.05■□□□□ 0.32
PTPA-223ENST00000452489 CRMP1Q14194 572 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms