RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 BTNL10A8MVZ5 291 aa3.99□□□□□ -1.77
SDCBP-205ENST00000447267 NR5A2O00482 541 aa3.99□□□□□ -1.77
SDCBP-205ENST00000447267 SH3BGRLO75368 114 aa3.99□□□□□ -1.77
SDCBP-205ENST00000447267 LINGO3P0C6S8 592 aa3.99□□□□□ -1.77
SDCBP-205ENST00000447267 MPC1LP0DKB6 136 aa3.99□□□□□ -1.77
SDCBP-205ENST00000447267 UROSP10746 265 aa3.99□□□□□ -1.77
SDCBP-205ENST00000447267 TTPAP49638 278 aa3.99□□□□□ -1.77
SDCBP-205ENST00000447267 EVX1P49640 407 aa3.99□□□□□ -1.77
SDCBP-205ENST00000447267 LUMP51884 338 aaPredicted RBP3.99□□□□□ -1.77
SDCBP-205ENST00000447267 B2MP61769 119 aa3.99□□□□□ -1.77
SDCBP-205ENST00000447267 HOXA4Q00056 320 aaPredicted RBP3.99□□□□□ -1.77
SDCBP-205ENST00000447267 PSG6Q00889 435 aa3.99□□□□□ -1.77
SDCBP-205ENST00000447267 DR1Q01658 176 aa3.99□□□□□ -1.77
SDCBP-205ENST00000447267 POU3F1Q03052 451 aaPredicted RBP3.99□□□□□ -1.77
SDCBP-205ENST00000447267 SNTB2Q13425 540 aaKnown RBP3.99□□□□□ -1.77
SDCBP-205ENST00000447267 EFR3AQ14156 821 aa3.99□□□□□ -1.77
SDCBP-205ENST00000447267 RCN2Q14257 317 aa3.99□□□□□ -1.77
SDCBP-205ENST00000447267 CSHL1Q14406 222 aa3.99□□□□□ -1.77
SDCBP-205ENST00000447267 RNASE12Q5GAN4 147 aaKnown RBP3.99□□□□□ -1.77
SDCBP-205ENST00000447267 GKAP1Q5VSY0 366 aaPredicted RBP3.99□□□□□ -1.77
SDCBP-205ENST00000447267 C18orf63Q68DL7 685 aa3.99□□□□□ -1.77
SDCBP-205ENST00000447267 AWAT2Q6E213 333 aa3.99□□□□□ -1.77
SDCBP-205ENST00000447267 CASC4Q6P4E1 433 aa3.99□□□□□ -1.77
SDCBP-205ENST00000447267 C11orf88Q6PI97 169 aa3.99□□□□□ -1.77
SDCBP-205ENST00000447267 C16orf54Q6UWD8 224 aa3.99□□□□□ -1.77
SDCBP-205ENST00000447267 BTNL3Q6UXE8 466 aa3.99□□□□□ -1.77
SDCBP-205ENST00000447267 LRRN1Q6UXK5 716 aa3.99□□□□□ -1.77
SDCBP-205ENST00000447267 LINC00336Q6ZUF6 198 aa3.99□□□□□ -1.77
SDCBP-205ENST00000447267 IKBIPQ70UQ0 350 aa3.99□□□□□ -1.77
SDCBP-205ENST00000447267 APTXQ7Z2E3 356 aaKnown RBP3.99□□□□□ -1.77
SDCBP-205ENST00000447267 GALNT5Q7Z7M9 940 aa3.99□□□□□ -1.77
SDCBP-205ENST00000447267 VSTM4Q8IW00 320 aa3.99□□□□□ -1.77
SDCBP-205ENST00000447267 SPERTQ8NA61 448 aa3.99□□□□□ -1.77
SDCBP-205ENST00000447267 C7orf57Q8NEG2 295 aa3.99□□□□□ -1.77
SDCBP-205ENST00000447267 ATP6V1C2Q8NEY4 427 aa3.99□□□□□ -1.77
SDCBP-205ENST00000447267 OR2L5Q8NG80 312 aa3.99□□□□□ -1.77
SDCBP-205ENST00000447267 OR56A3Q8NH54 315 aa3.99□□□□□ -1.77
SDCBP-205ENST00000447267 MAIP1Q8WWC4 291 aa3.99□□□□□ -1.77
SDCBP-205ENST00000447267 SLC5A11Q8WWX8 675 aa3.99□□□□□ -1.77
SDCBP-205ENST00000447267 LRTOMTQ8WZ04 291 aa3.99□□□□□ -1.77
SDCBP-205ENST00000447267 LPGAT1Q92604 370 aa3.99□□□□□ -1.77
SDCBP-205ENST00000447267 NSMAFQ92636 917 aa3.99□□□□□ -1.77
SDCBP-205ENST00000447267 HAUS1Q96CS2 278 aa3.99□□□□□ -1.77
SDCBP-205ENST00000447267 KLHL15Q96M94 604 aa3.99□□□□□ -1.77
SDCBP-205ENST00000447267 F2RL3Q96RI0 385 aa3.99□□□□□ -1.77
SDCBP-205ENST00000447267 NDNQ99608 321 aa3.99□□□□□ -1.77
SDCBP-205ENST00000447267 CGREF1Q99674 301 aa3.99□□□□□ -1.77
SDCBP-205ENST00000447267 KLHDC3Q9BQ90 382 aa3.99□□□□□ -1.77
SDCBP-205ENST00000447267 PCGF1Q9BSM1 259 aa3.99□□□□□ -1.77
SDCBP-205ENST00000447267 RPF2Q9H7B2 306 aaKnown RBP3.99□□□□□ -1.77
SDCBP-205ENST00000447267 PTGES2Q9H7Z7 377 aa3.99□□□□□ -1.77
SDCBP-205ENST00000447267 COPS7BQ9H9Q2 264 aaPredicted RBP3.99□□□□□ -1.77
SDCBP-205ENST00000447267 PPCSQ9HAB8 311 aa3.99□□□□□ -1.77
SDCBP-205ENST00000447267 CXorf21Q9HAI6 301 aa3.99□□□□□ -1.77
SDCBP-205ENST00000447267 NRIP3Q9NQ35 241 aa3.99□□□□□ -1.77
SDCBP-205ENST00000447267 ACOXLQ9NUZ1 547 aa3.99□□□□□ -1.77
SDCBP-205ENST00000447267 ASIC5Q9NY37 505 aa3.99□□□□□ -1.77
SDCBP-205ENST00000447267 OR5V1Q9UGF6 321 aa3.99□□□□□ -1.77
SDCBP-205ENST00000447267 MED16Q9Y2X0 877 aa3.99□□□□□ -1.77
SDCBP-205ENST00000447267 SH3GLB1Q9Y371 365 aa3.99□□□□□ -1.77
SDCBP-205ENST00000447267 SNX5Q9Y5X3 404 aa3.99□□□□□ -1.77
SDCBP-205ENST00000447267 CAPN7Q9Y6W3 813 aa3.99□□□□□ -1.77
SDCBP-205ENST00000447267 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.98□□□□□ -1.77
SDCBP-205ENST00000447267 A0A088AWK7 358 aa3.98□□□□□ -1.77
SDCBP-205ENST00000447267 IGHV2-70DA0A0C4DH43 119 aa3.98□□□□□ -1.77
SDCBP-205ENST00000447267 OR6C70A6NIJ9 312 aa3.98□□□□□ -1.77
SDCBP-205ENST00000447267 HACD1B0YJ81 288 aa3.98□□□□□ -1.77
SDCBP-205ENST00000447267 PHGDHO43175 533 aaKnown RBP3.98□□□□□ -1.77
SDCBP-205ENST00000447267 ZSCAN12O43309 604 aa3.98□□□□□ -1.77
SDCBP-205ENST00000447267 ZBTB14O43829 449 aa3.98□□□□□ -1.77
SDCBP-205ENST00000447267 EFNA2O43921 213 aa3.98□□□□□ -1.77
SDCBP-205ENST00000447267 CST8O60676 142 aa3.98□□□□□ -1.77
SDCBP-205ENST00000447267 SUPT3HO75486 399 aa3.98□□□□□ -1.77
SDCBP-205ENST00000447267 TGDSO95455 350 aa3.98□□□□□ -1.77
SDCBP-205ENST00000447267 THY1P04216 161 aa3.98□□□□□ -1.77
SDCBP-205ENST00000447267 OR12D1P0DN82 309 aa3.98□□□□□ -1.77
SDCBP-205ENST00000447267 PCNAP12004 261 aa3.98□□□□□ -1.77
SDCBP-205ENST00000447267 CD1DP15813 335 aa3.98□□□□□ -1.77
SDCBP-205ENST00000447267 ZNF14P17017 642 aaPredicted RBP3.98□□□□□ -1.77
SDCBP-205ENST00000447267 S1PR1P21453 382 aa3.98□□□□□ -1.77
SDCBP-205ENST00000447267 ZNF10P21506 573 aaPredicted RBP3.98□□□□□ -1.77
SDCBP-205ENST00000447267 CTNNA2P26232 953 aa3.98□□□□□ -1.77
SDCBP-205ENST00000447267 PPARGP37231 505 aaPredicted RBP3.98□□□□□ -1.77
SDCBP-205ENST00000447267 CDKN2BP42772 138 aa3.98□□□□□ -1.77
SDCBP-205ENST00000447267 LINC00205P59089 165 aa3.98□□□□□ -1.77
SDCBP-205ENST00000447267 DAG1Q14118 895 aa3.98□□□□□ -1.77
SDCBP-205ENST00000447267 PRPSAP1Q14558 356 aa3.98□□□□□ -1.77
SDCBP-205ENST00000447267 EXOSC7Q15024 291 aaKnown RBP3.98□□□□□ -1.77
SDCBP-205ENST00000447267 SNCBQ16143 134 aa3.98□□□□□ -1.77
SDCBP-205ENST00000447267 LY6EQ16553 131 aa3.98□□□□□ -1.77
SDCBP-205ENST00000447267 TSTQ16762 297 aaKnown RBP3.98□□□□□ -1.77
SDCBP-205ENST00000447267 PLPPR5Q32ZL2 321 aa3.98□□□□□ -1.77
SDCBP-205ENST00000447267 CCDC153Q494R4 210 aa3.98□□□□□ -1.77
SDCBP-205ENST00000447267 GLYR1Q49A26 553 aaPredicted RBP3.98□□□□□ -1.77
SDCBP-205ENST00000447267 TTMPQ5BVD1 217 aa3.98□□□□□ -1.77
SDCBP-205ENST00000447267 TCP11X2Q5H9J9 407 aa3.98□□□□□ -1.77
SDCBP-205ENST00000447267 TECRLQ5HYJ1 363 aa3.98□□□□□ -1.77
SDCBP-205ENST00000447267 KHDC1LQ5JSQ8 128 aa3.98□□□□□ -1.77
SDCBP-205ENST00000447267 KHDRBS2Q5VWX1 349 aaKnown RBP3.98□□□□□ -1.77
SDCBP-205ENST00000447267 ABLIM2Q6H8Q1 611 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms