RNA–Protein interactions for RNA: ENST00000381753.8

LIMCH1-202, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-202ENST00000381753 ACSS1Q9NUB1 689 aaPredicted RBP8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 ZNF391Q9UJN7 358 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 H7C417 338 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 DIRAS1O95057 198 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 RBM34P42696 430 aaKnown RBP8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 RPS4XP62701 263 aaKnown RBP8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 GNMTQ14749 295 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 PAN3Q58A45 887 aaKnown RBP8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 RHBDD2Q6NTF9 364 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 PRSS42Q7Z5A4 293 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 ZNF584Q8IVC4 421 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 CLECL1Q8IZS7 167 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 ZNF224Q9NZL3 707 aa8.43□□□□□ -1.06
LIMCH1-202ENST00000381753 TRBV2A0A0J9YWF9 115 aa8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 FRS3O43559 492 aa8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 ATP6V1G2O95670 118 aa8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 ADAP00813 363 aa8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 MT-ND2P03891 347 aa8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 LAMP1P11279 417 aa8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 FPR3P25089 353 aa8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 PRAMEF9Q5VWM5 478 aa8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 ABI3BPQ7Z7G0 1075 aa8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 MARVELD3Q96A59 401 aa8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 PYURFQ96I23 114 aa8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 MRGPRX3Q96LB0 322 aa8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 ARPC5LQ9BPX5 153 aa8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 ZNF471Q9BX82 626 aaPredicted RBP8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 ACTR3BQ9P1U1 418 aa8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 DNAJB9Q9UBS3 223 aa8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 ADAMTS6Q9UKP5 1117 aa8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 ZNF831Q5JPB2 1677 aa8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 A0A1B0GVC2 190 aa8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 TMEM269A0A1B0GVZ9 245 aa8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 TVP23AA6NH52 213 aa8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 FAM159BA6NKW6 160 aa8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 RAB27BO00194 218 aa8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 ADAM20O43506 726 aa8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 TUSC2O75896 110 aa8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 NCR1O76036 304 aa8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 FURINP09958 794 aa8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 CISD3P0C7P0 127 aa8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 CPT2P23786 658 aa8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 IMPA1P29218 277 aa8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 APOFQ13790 326 aa8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 SDR9C7Q8NEX9 313 aa8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 LRTOMTQ8WZ04 291 aa8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 LRFN5Q96NI6 719 aa8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 C12orf4Q9NQ89 552 aa8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 CYSLTR2Q9NS75 346 aa8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 RNF115Q9Y4L5 304 aa8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 ICOSLGO75144 302 aa8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 PEX2P28328 305 aa8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 TRHRP34981 398 aaPredicted RBP8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 GIPRP48546 466 aa8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 TUBA1BP68363 451 aa8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 TUBA4AP68366 448 aa8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 XIAPP98170 497 aa8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 MRPL2Q5T653 305 aaKnown RBP8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 OR2T5Q6IEZ7 315 aa8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 TUBA1AQ71U36 451 aa8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 SMIM15Q7Z3B0 74 aa8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 LILRA3Q8N6C8 439 aaPredicted RBP8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 CCDC71LQ8N9Z2 235 aa8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 OR2T29Q8NH02 315 aa8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 MRGPRX4Q96LA9 322 aa8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 ZNF700Q9H0M5 742 aa8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 TRPM3Q9HCF6 1732 aaPredicted RBP8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 RGPD4Q7Z3J3 1758 aa8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 LCMT2O60294 686 aaKnown RBP8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 PRKRAO75569 313 aaKnown RBP8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 IFNA5P01569 189 aa8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 HADHBP55084 474 aaKnown RBP8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 GPR176Q14439 515 aa8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 OR1Q1Q15612 314 aa8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 ZNF613Q6PF04 617 aa8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 RANBP10Q6VN20 620 aa8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 LINC01465Q8N7H1 131 aa8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 LINC01560Q8TB33 94 aa8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 TAAR8Q969N4 342 aa8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 TM4SF19Q96DZ7 209 aa8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 OR4C12Q96R67 309 aa8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 OR5M11Q96RB7 305 aa8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 ZMAT5Q9UDW3 170 aaKnown RBP8.42□□□□□ -1.06
LIMCH1-202ENST00000381753 ERVH48-1M5A8F1 160 aa8.41□□□□□ -1.06
LIMCH1-202ENST00000381753 SH2D1BO14796 132 aa8.41□□□□□ -1.06
LIMCH1-202ENST00000381753 C21orf33P30042 268 aaPredicted RBP8.41□□□□□ -1.06
LIMCH1-202ENST00000381753 DRD3P35462 400 aa8.41□□□□□ -1.06
LIMCH1-202ENST00000381753 SNTB1Q13884 538 aaKnown RBP8.41□□□□□ -1.06
LIMCH1-202ENST00000381753 RAB6CQ53S08 254 aa8.41□□□□□ -1.06
LIMCH1-202ENST00000381753 C6orf136Q5SQH8 315 aa8.41□□□□□ -1.06
LIMCH1-202ENST00000381753 ADAM5Q6NVV9 412 aa8.41□□□□□ -1.06
LIMCH1-202ENST00000381753 ZNF793Q6ZN11 406 aa8.41□□□□□ -1.06
LIMCH1-202ENST00000381753 OR5AK2Q8NH90 309 aa8.41□□□□□ -1.06
LIMCH1-202ENST00000381753 S100A16Q96FQ6 103 aaKnown RBP8.41□□□□□ -1.06
LIMCH1-202ENST00000381753 ZNF681Q96N22 645 aa8.41□□□□□ -1.06
LIMCH1-202ENST00000381753 SLC6A7Q99884 636 aa8.41□□□□□ -1.06
LIMCH1-202ENST00000381753 RAB6CQ9H0N0 254 aa8.41□□□□□ -1.06
LIMCH1-202ENST00000381753 MDFIC2A0A1B0GVS7 189 aa8.41□□□□□ -1.06
LIMCH1-202ENST00000381753 CBFA2T3O75081 653 aa8.41□□□□□ -1.06
LIMCH1-202ENST00000381753 ENTPD6O75354 484 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms