RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 POM121BA6NF01 834 aa15.75■□□□□ 0.11
TRAPPC11-201ENST00000334690 B4DXG7 233 aa15.75■□□□□ 0.11
TRAPPC11-201ENST00000334690 ICAM2P13598 275 aa15.75■□□□□ 0.11
TRAPPC11-201ENST00000334690 SRMP19623 302 aa15.75■□□□□ 0.11
TRAPPC11-201ENST00000334690 GABRR1P24046 479 aa15.75■□□□□ 0.11
TRAPPC11-201ENST00000334690 APLNRP35414 380 aa15.75■□□□□ 0.11
TRAPPC11-201ENST00000334690 EFNA3P52797 238 aa15.75■□□□□ 0.11
TRAPPC11-201ENST00000334690 RACK1P63244 317 aaKnown RBP15.75■□□□□ 0.11
TRAPPC11-201ENST00000334690 GPR157Q5UAW9 335 aa15.75■□□□□ 0.11
TRAPPC11-201ENST00000334690 SLC25A19Q9HC21 320 aa15.75■□□□□ 0.11
TRAPPC11-201ENST00000334690 CNOT4O95628 575 aaKnown RBP15.75■□□□□ 0.11
TRAPPC11-201ENST00000334690 CD79AP11912 226 aa15.75■□□□□ 0.11
TRAPPC11-201ENST00000334690 POU3F2P20265 443 aaPredicted RBP15.75■□□□□ 0.11
TRAPPC11-201ENST00000334690 ITGB8P26012 769 aa15.75■□□□□ 0.11
TRAPPC11-201ENST00000334690 DDOSTP39656 456 aa15.75■□□□□ 0.11
TRAPPC11-201ENST00000334690 RPS27AP62979 156 aaKnown RBP15.75■□□□□ 0.11
TRAPPC11-201ENST00000334690 UBA52P62987 128 aaKnown RBP15.75■□□□□ 0.11
TRAPPC11-201ENST00000334690 NXT1Q9UKK6 140 aaKnown RBP15.75■□□□□ 0.11
TRAPPC11-201ENST00000334690 NUP214P35658 2090 aaPredicted RBP15.75■□□□□ 0.11
TRAPPC11-201ENST00000334690 LCMT2O60294 686 aaKnown RBP15.75■□□□□ 0.11
TRAPPC11-201ENST00000334690 TUBG1P23258 451 aa15.75■□□□□ 0.11
TRAPPC11-201ENST00000334690 DCDP81605 110 aaKnown RBP15.75■□□□□ 0.11
TRAPPC11-201ENST00000334690 ZNF169Q14929 603 aaPredicted RBP15.75■□□□□ 0.11
TRAPPC11-201ENST00000334690 OPCMLQ14982 345 aa15.75■□□□□ 0.11
TRAPPC11-201ENST00000334690 ELAVL1Q15717 326 aaKnown RBP15.75■□□□□ 0.11
TRAPPC11-201ENST00000334690 TMEM240Q5SV17 173 aa15.75■□□□□ 0.11
TRAPPC11-201ENST00000334690 RNF165Q6ZSG1 346 aa15.75■□□□□ 0.11
TRAPPC11-201ENST00000334690 OR5B12Q96R08 314 aa15.75■□□□□ 0.11
TRAPPC11-201ENST00000334690 EMC7Q9NPA0 242 aa15.75■□□□□ 0.11
TRAPPC11-201ENST00000334690 EHFQ9NZC4 300 aa15.75■□□□□ 0.11
TRAPPC11-201ENST00000334690 IGLV3-16A0A075B6K0 115 aa15.75■□□□□ 0.11
TRAPPC11-201ENST00000334690 FCMRO60667 390 aa15.75■□□□□ 0.11
TRAPPC11-201ENST00000334690 NFYAP23511 347 aaPredicted RBP15.75■□□□□ 0.11
TRAPPC11-201ENST00000334690 AFF3P51826 1226 aaKnown RBP15.75■□□□□ 0.11
TRAPPC11-201ENST00000334690 CLDN6P56747 220 aa15.75■□□□□ 0.11
TRAPPC11-201ENST00000334690 TNK1Q13470 666 aa15.75■□□□□ 0.11
TRAPPC11-201ENST00000334690 SMAD2Q15796 467 aaKnown RBP15.75■□□□□ 0.11
TRAPPC11-201ENST00000334690 USP51Q70EK9 711 aa15.75■□□□□ 0.11
TRAPPC11-201ENST00000334690 NKAIN3Q8N8D7 197 aa15.75■□□□□ 0.11
TRAPPC11-201ENST00000334690 OR7G2Q8NG99 324 aa15.75■□□□□ 0.11
TRAPPC11-201ENST00000334690 OR2A1Q8NGT9 310 aa15.75■□□□□ 0.11
TRAPPC11-201ENST00000334690 SLC35B4Q969S0 331 aa15.75■□□□□ 0.11
TRAPPC11-201ENST00000334690 SLC25A21Q9BQT8 299 aaPredicted RBP15.75■□□□□ 0.11
TRAPPC11-201ENST00000334690 LIN7BQ9HAP6 207 aa15.75■□□□□ 0.11
TRAPPC11-201ENST00000334690 SLC23A2Q9UGH3 650 aa15.75■□□□□ 0.11
TRAPPC11-201ENST00000334690 WIF1Q9Y5W5 379 aa15.75■□□□□ 0.11
TRAPPC11-201ENST00000334690 SCN1AP35498 2009 aa15.75■□□□□ 0.11
TRAPPC11-201ENST00000334690 ANKRD30BLA7E2S9 258 aa15.74■□□□□ 0.11
TRAPPC11-201ENST00000334690 S100A12P80511 92 aa15.74■□□□□ 0.11
TRAPPC11-201ENST00000334690 STEAP1BQ6NZ63 245 aa15.74■□□□□ 0.11
TRAPPC11-201ENST00000334690 PARM1Q6UWI2 310 aa15.74■□□□□ 0.11
TRAPPC11-201ENST00000334690 TRAPPC6BQ86SZ2 158 aa15.74■□□□□ 0.11
TRAPPC11-201ENST00000334690 SSC5DA1L4H1 1573 aa15.74■□□□□ 0.11
TRAPPC11-201ENST00000334690 LAMB2P55268 1798 aa15.74■□□□□ 0.11
TRAPPC11-201ENST00000334690 CD27P26842 260 aa15.74■□□□□ 0.11
TRAPPC11-201ENST00000334690 EPHA2P29317 976 aa15.74■□□□□ 0.11
TRAPPC11-201ENST00000334690 EIF1P41567 113 aaKnown RBP15.74■□□□□ 0.11
TRAPPC11-201ENST00000334690 SLC35A1P78382 337 aa15.74■□□□□ 0.11
TRAPPC11-201ENST00000334690 ECH1Q13011 328 aa15.74■□□□□ 0.11
TRAPPC11-201ENST00000334690 TPBGQ13641 420 aa15.74■□□□□ 0.11
TRAPPC11-201ENST00000334690 NIPAL3Q6P499 406 aa15.74■□□□□ 0.11
TRAPPC11-201ENST00000334690 CREB3L2Q70SY1 520 aa15.74■□□□□ 0.11
TRAPPC11-201ENST00000334690 FAM57BQ71RH2 274 aa15.74■□□□□ 0.11
TRAPPC11-201ENST00000334690 LILRB2Q8N423 598 aa15.74■□□□□ 0.11
TRAPPC11-201ENST00000334690 SLC22A24Q8N4F4 322 aa15.74■□□□□ 0.11
TRAPPC11-201ENST00000334690 DNAAF1Q8NEP3 725 aa15.74■□□□□ 0.11
TRAPPC11-201ENST00000334690 PFN4Q8NHR9 129 aa15.74■□□□□ 0.11
TRAPPC11-201ENST00000334690 RASD2Q96D21 266 aa15.74■□□□□ 0.11
TRAPPC11-201ENST00000334690 YIPF6Q96EC8 236 aa15.74■□□□□ 0.11
TRAPPC11-201ENST00000334690 SGCZQ96LD1 299 aa15.74■□□□□ 0.11
TRAPPC11-201ENST00000334690 ZNF649Q9BS31 505 aa15.74■□□□□ 0.11
TRAPPC11-201ENST00000334690 SLC6A17Q9H1V8 727 aa15.74■□□□□ 0.11
TRAPPC11-201ENST00000334690 GALNT9Q9HCQ5 603 aa15.74■□□□□ 0.11
TRAPPC11-201ENST00000334690 KCNJ16Q9NPI9 418 aa15.74■□□□□ 0.11
TRAPPC11-201ENST00000334690 SLC22A23A1A5C7 686 aa15.74■□□□□ 0.11
TRAPPC11-201ENST00000334690 IGFBP1P08833 259 aaPredicted RBP15.74■□□□□ 0.11
TRAPPC11-201ENST00000334690 PPP3CBP16298 524 aa15.74■□□□□ 0.11
TRAPPC11-201ENST00000334690 SERPINA2P20848 420 aa15.74■□□□□ 0.11
TRAPPC11-201ENST00000334690 SORDQ00796 357 aa15.74■□□□□ 0.11
TRAPPC11-201ENST00000334690 BDH1Q02338 343 aa15.74■□□□□ 0.11
TRAPPC11-201ENST00000334690 CD276Q5ZPR3 534 aa15.74■□□□□ 0.11
TRAPPC11-201ENST00000334690 OVCH1Q7RTY7 1134 aa15.74■□□□□ 0.11
TRAPPC11-201ENST00000334690 OR51D1Q8NGF3 324 aa15.74■□□□□ 0.11
TRAPPC11-201ENST00000334690 OR5H6Q8NGV6 325 aa15.74■□□□□ 0.11
TRAPPC11-201ENST00000334690 STK35Q8TDR2 534 aa15.74■□□□□ 0.11
TRAPPC11-201ENST00000334690 RAB3CQ96E17 227 aa15.74■□□□□ 0.11
TRAPPC11-201ENST00000334690 TSPAN10Q9H1Z9 355 aaPredicted RBP15.74■□□□□ 0.11
TRAPPC11-201ENST00000334690 RNF167Q9H6Y7 350 aa15.74■□□□□ 0.11
TRAPPC11-201ENST00000334690 STEAP1Q9UHE8 339 aa15.74■□□□□ 0.11
TRAPPC11-201ENST00000334690 TSPAN11A1L157 253 aa15.73■□□□□ 0.11
TRAPPC11-201ENST00000334690 C1orf196B1AJZ1 125 aa15.73■□□□□ 0.11
TRAPPC11-201ENST00000334690 WDPCPO95876 746 aa15.73■□□□□ 0.11
TRAPPC11-201ENST00000334690 GDF1P27539 372 aa15.73■□□□□ 0.11
TRAPPC11-201ENST00000334690 TMEM201Q5SNT2 666 aa15.73■□□□□ 0.11
TRAPPC11-201ENST00000334690 FCRL6Q6DN72 434 aa15.73■□□□□ 0.11
TRAPPC11-201ENST00000334690 ZNF529Q6P280 563 aa15.73■□□□□ 0.11
TRAPPC11-201ENST00000334690 GRINAQ7Z429 371 aa15.73■□□□□ 0.11
TRAPPC11-201ENST00000334690 ZNF683Q8IZ20 524 aa15.73■□□□□ 0.11
TRAPPC11-201ENST00000334690 OR4K15Q8NH41 348 aa15.73■□□□□ 0.11
TRAPPC11-201ENST00000334690 FAM3DQ96BQ1 224 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms