RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 OR51L1Q8NGJ5 315 aa20.41■□□□□ 0.86
CDX1-201ENST00000231656 PAQR8Q8TEZ7 354 aa20.41■□□□□ 0.86
CDX1-201ENST00000231656 SLC25A46Q96AG3 418 aa20.41■□□□□ 0.86
CDX1-201ENST00000231656 DCLRE1CQ96SD1 692 aaKnown RBP20.41■□□□□ 0.86
CDX1-201ENST00000231656 CNN2Q99439 309 aaKnown RBP20.41■□□□□ 0.86
CDX1-201ENST00000231656 COQ7Q99807 217 aa20.41■□□□□ 0.86
CDX1-201ENST00000231656 KCNS3Q9BQ31 491 aa20.41■□□□□ 0.86
CDX1-201ENST00000231656 SH2D2AQ9NP31 389 aa20.41■□□□□ 0.86
CDX1-201ENST00000231656 STMN3Q9NZ72 180 aa20.41■□□□□ 0.86
CDX1-201ENST00000231656 APC2O95996 2303 aa20.4■□□□□ 0.86
CDX1-201ENST00000231656 ANKUB1A6NFN9 424 aa20.4■□□□□ 0.86
CDX1-201ENST00000231656 MT-ND5P03915 603 aa20.4■□□□□ 0.86
CDX1-201ENST00000231656 CD40LGP29965 261 aa20.4■□□□□ 0.86
CDX1-201ENST00000231656 SDHAP31040 664 aa20.4■□□□□ 0.86
CDX1-201ENST00000231656 IFITM3Q01628 133 aa20.4■□□□□ 0.86
CDX1-201ENST00000231656 OR5M10Q6IEU7 315 aa20.4■□□□□ 0.86
CDX1-201ENST00000231656 GALNT16Q8N428 558 aa20.4■□□□□ 0.86
CDX1-201ENST00000231656 EXD3Q8N9H8 876 aa20.4■□□□□ 0.86
CDX1-201ENST00000231656 SYT14Q8NB59 555 aa20.4■□□□□ 0.86
CDX1-201ENST00000231656 LSM14AQ8ND56 463 aaKnown RBP20.4■□□□□ 0.86
CDX1-201ENST00000231656 ZNF248Q8NDW4 579 aa20.4■□□□□ 0.86
CDX1-201ENST00000231656 CHPT1Q8WUD6 406 aa20.4■□□□□ 0.86
CDX1-201ENST00000231656 TMED9Q9BVK6 235 aa20.4■□□□□ 0.86
CDX1-201ENST00000231656 SMURF1Q9HCE7 757 aa20.4■□□□□ 0.86
CDX1-201ENST00000231656 ANKRD10Q9NXR5 420 aa20.4■□□□□ 0.86
CDX1-201ENST00000231656 NOX1Q9Y5S8 564 aa20.4■□□□□ 0.86
CDX1-201ENST00000231656 WIF1Q9Y5W5 379 aa20.4■□□□□ 0.86
CDX1-201ENST00000231656 SLC25A12O75746 678 aa20.39■□□□□ 0.86
CDX1-201ENST00000231656 HLA-DPB1P04440 258 aa20.39■□□□□ 0.86
CDX1-201ENST00000231656 HIST1H2ABP04908 130 aa20.39■□□□□ 0.86
CDX1-201ENST00000231656 CLEC2LP0C7M8 214 aa20.39■□□□□ 0.86
CDX1-201ENST00000231656 CCL3P10147 92 aa20.39■□□□□ 0.86
CDX1-201ENST00000231656 ETV6P41212 452 aa20.39■□□□□ 0.86
CDX1-201ENST00000231656 SLC25A1P53007 311 aa20.39■□□□□ 0.86
CDX1-201ENST00000231656 SNTA1Q13424 505 aa20.39■□□□□ 0.86
CDX1-201ENST00000231656 PON3Q15166 354 aa20.39■□□□□ 0.86
CDX1-201ENST00000231656 LEG1Q6P5S2 330 aa20.39■□□□□ 0.86
CDX1-201ENST00000231656 HIST3H2AQ7L7L0 130 aa20.39■□□□□ 0.86
CDX1-201ENST00000231656 SSX6Q7RTT6 188 aa20.39■□□□□ 0.86
CDX1-201ENST00000231656 GPALPP1Q8IXQ4 340 aa20.39■□□□□ 0.86
CDX1-201ENST00000231656 GHDCQ8N2G8 530 aa20.39■□□□□ 0.86
CDX1-201ENST00000231656 HIST1H2ACQ93077 130 aa20.39■□□□□ 0.86
CDX1-201ENST00000231656 SGCZQ96LD1 299 aa20.39■□□□□ 0.86
CDX1-201ENST00000231656 TRIM36Q9NQ86 728 aa20.39■□□□□ 0.86
CDX1-201ENST00000231656 CRNNQ9UBG3 495 aaPredicted RBP20.39■□□□□ 0.86
CDX1-201ENST00000231656 GSTK1Q9Y2Q3 226 aa20.39■□□□□ 0.86
CDX1-201ENST00000231656 LAMA5O15230 3695 aa20.39■□□□□ 0.86
CDX1-201ENST00000231656 ACACAQ13085 2346 aa20.39■□□□□ 0.85
CDX1-201ENST00000231656 ZNF891A8MT65 544 aaPredicted RBP20.39■□□□□ 0.85
CDX1-201ENST00000231656 RNF13O43567 381 aa20.39■□□□□ 0.85
CDX1-201ENST00000231656 MT-ATP6P00846 226 aa20.39■□□□□ 0.85
CDX1-201ENST00000231656 F13BP05160 661 aa20.39■□□□□ 0.85
CDX1-201ENST00000231656 GALP22466 123 aa20.39■□□□□ 0.85
CDX1-201ENST00000231656 SUMO3P55854 103 aaPredicted RBP20.39■□□□□ 0.85
CDX1-201ENST00000231656 SOX8P57073 446 aa20.39■□□□□ 0.85
CDX1-201ENST00000231656 CDC20Q12834 499 aa20.39■□□□□ 0.85
CDX1-201ENST00000231656 RGS21Q2M5E4 152 aa20.39■□□□□ 0.85
CDX1-201ENST00000231656 EMC4Q5J8M3 183 aa20.39■□□□□ 0.85
CDX1-201ENST00000231656 ABHD17BQ5VST6 288 aa20.39■□□□□ 0.85
CDX1-201ENST00000231656 PRAMEF20Q5VT98 475 aa20.39■□□□□ 0.85
CDX1-201ENST00000231656 SLC22A10Q63ZE4 541 aa20.39■□□□□ 0.85
CDX1-201ENST00000231656 RFLNBQ8N5W9 214 aa20.39■□□□□ 0.85
CDX1-201ENST00000231656 C4orf36Q96KX1 117 aa20.39■□□□□ 0.85
CDX1-201ENST00000231656 TSPAN32Q96QS1 320 aa20.39■□□□□ 0.85
CDX1-201ENST00000231656 NDEL1Q9GZM8 345 aa20.39■□□□□ 0.85
CDX1-201ENST00000231656 SDHAF3Q9NRP4 125 aa20.39■□□□□ 0.85
CDX1-201ENST00000231656 GALNT8Q9NY28 637 aa20.39■□□□□ 0.85
CDX1-201ENST00000231656 A8MVM7 634 aa20.38■□□□□ 0.85
CDX1-201ENST00000231656 E9PI62 339 aa20.38■□□□□ 0.85
CDX1-201ENST00000231656 GABRPO00591 440 aa20.38■□□□□ 0.85
CDX1-201ENST00000231656 CTDSP2O14595 271 aa20.38■□□□□ 0.85
CDX1-201ENST00000231656 KLK10O43240 276 aa20.38■□□□□ 0.85
CDX1-201ENST00000231656 EFSO43281 561 aa20.38■□□□□ 0.85
CDX1-201ENST00000231656 OR2T7P0C7T2 308 aa20.38■□□□□ 0.85
CDX1-201ENST00000231656 SDC2P34741 201 aa20.38■□□□□ 0.85
CDX1-201ENST00000231656 HTR3AP46098 478 aa20.38■□□□□ 0.85
CDX1-201ENST00000231656 TGM4P49221 684 aa20.38■□□□□ 0.85
CDX1-201ENST00000231656 DLX5P56178 289 aa20.38■□□□□ 0.85
CDX1-201ENST00000231656 ZNF45Q02386 682 aa20.38■□□□□ 0.85
CDX1-201ENST00000231656 MXD1Q05195 221 aa20.38■□□□□ 0.85
CDX1-201ENST00000231656 LINC01590Q5TEZ4 76 aa20.38■□□□□ 0.85
CDX1-201ENST00000231656 MAMDC2Q7Z304 686 aaPredicted RBP20.38■□□□□ 0.85
CDX1-201ENST00000231656 MDGA2Q7Z553 956 aa20.38■□□□□ 0.85
CDX1-201ENST00000231656 CCDC190Q86UF4 302 aa20.38■□□□□ 0.85
CDX1-201ENST00000231656 JAZF1Q86VZ6 243 aa20.38■□□□□ 0.85
CDX1-201ENST00000231656 SNX29P2Q8IUI4 249 aa20.38■□□□□ 0.85
CDX1-201ENST00000231656 OR2T27Q8NH04 317 aa20.38■□□□□ 0.85
CDX1-201ENST00000231656 STK35Q8TDR2 534 aa20.38■□□□□ 0.85
CDX1-201ENST00000231656 TMEM234Q8WY98 164 aa20.38■□□□□ 0.85
CDX1-201ENST00000231656 ST8SIA1Q92185 356 aa20.38■□□□□ 0.85
CDX1-201ENST00000231656 CPNE5Q9HCH3 593 aa20.38■□□□□ 0.85
CDX1-201ENST00000231656 TAS2R5Q9NYW4 299 aa20.38■□□□□ 0.85
CDX1-201ENST00000231656 PPP4R1LQ9P1A2 415 aa20.38■□□□□ 0.85
CDX1-201ENST00000231656 POLHQ9Y253 713 aa20.38■□□□□ 0.85
CDX1-201ENST00000231656 HRH3Q9Y5N1 445 aa20.38■□□□□ 0.85
CDX1-201ENST00000231656 hCG_2014768A0A024R1R8 64 aa20.37■□□□□ 0.85
CDX1-201ENST00000231656 IQCMA0A1B0GVH7 501 aa20.37■□□□□ 0.85
CDX1-201ENST00000231656 GLCEO94923 617 aa20.37■□□□□ 0.85
CDX1-201ENST00000231656 PRKCAP17252 672 aa20.37■□□□□ 0.85
CDX1-201ENST00000231656 CAPZA2P47755 286 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms