RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 FKBP2P26885 142 aaKnown RBP11.79□□□□□ -0.52
SNX1-214ENST00000625244 RYKP34925 604 aa11.79□□□□□ -0.52
SNX1-214ENST00000625244 GLRXP35754 106 aa11.79□□□□□ -0.52
SNX1-214ENST00000625244 ARF1P84077 181 aaKnown RBP11.79□□□□□ -0.52
SNX1-214ENST00000625244 ZNF154Q13106 437 aa11.79□□□□□ -0.52
SNX1-214ENST00000625244 IMPG1Q17R60 797 aa11.79□□□□□ -0.52
SNX1-214ENST00000625244 GLIPR1L2Q4G1C9 344 aa11.79□□□□□ -0.52
SNX1-214ENST00000625244 TTMPQ5BVD1 217 aa11.79□□□□□ -0.52
SNX1-214ENST00000625244 ATG16L1Q676U5 607 aa11.79□□□□□ -0.52
SNX1-214ENST00000625244 GPAT4Q86UL3 456 aa11.79□□□□□ -0.52
SNX1-214ENST00000625244 GLB1L3Q8NCI6 653 aaPredicted RBP11.79□□□□□ -0.52
SNX1-214ENST00000625244 ADAMTS15Q8TE58 950 aa11.79□□□□□ -0.52
SNX1-214ENST00000625244 DYDC1Q8WWB3 177 aa11.79□□□□□ -0.52
SNX1-214ENST00000625244 KTI12Q96EK9 354 aaPredicted RBP11.79□□□□□ -0.52
SNX1-214ENST00000625244 MS4A3Q96HJ5 214 aa11.79□□□□□ -0.52
SNX1-214ENST00000625244 SF3B5Q9BWJ5 86 aaKnown RBP11.79□□□□□ -0.52
SNX1-214ENST00000625244 ACTRT3Q9BYD9 372 aa11.79□□□□□ -0.52
SNX1-214ENST00000625244 SH3BP4Q9P0V3 963 aa11.79□□□□□ -0.52
SNX1-214ENST00000625244 DUSP13Q9UII6 198 aa11.79□□□□□ -0.52
SNX1-214ENST00000625244 PURGQ9UJV8 347 aaKnown RBP11.79□□□□□ -0.52
SNX1-214ENST00000625244 IGHV3OR16-10A0A075B7F0 116 aa11.78□□□□□ -0.52
SNX1-214ENST00000625244 A0A1W2PPW3 197 aa11.78□□□□□ -0.52
SNX1-214ENST00000625244 TMEM72A0PK05 275 aa11.78□□□□□ -0.52
SNX1-214ENST00000625244 ZC3H12DA2A288 527 aaKnown RBP11.78□□□□□ -0.52
SNX1-214ENST00000625244 AZIN1O14977 448 aa11.78□□□□□ -0.52
SNX1-214ENST00000625244 TRAF3IP2O43734 574 aaPredicted RBP11.78□□□□□ -0.52
SNX1-214ENST00000625244 SASH3O75995 380 aa11.78□□□□□ -0.52
SNX1-214ENST00000625244 SEC14L2O76054 403 aa11.78□□□□□ -0.52
SNX1-214ENST00000625244 AKR7A3O95154 331 aa11.78□□□□□ -0.52
SNX1-214ENST00000625244 NDUFA7O95182 113 aa11.78□□□□□ -0.52
SNX1-214ENST00000625244 IGHV4-38-2P0DP08 117 aa11.78□□□□□ -0.52
SNX1-214ENST00000625244 ZNF35P13682 527 aa11.78□□□□□ -0.52
SNX1-214ENST00000625244 CRYBB2P43320 205 aa11.78□□□□□ -0.52
SNX1-214ENST00000625244 MTNR1AP48039 350 aa11.78□□□□□ -0.52
SNX1-214ENST00000625244 FOXA1P55317 472 aa11.78□□□□□ -0.52
SNX1-214ENST00000625244 LOXL3P58215 753 aa11.78□□□□□ -0.52
SNX1-214ENST00000625244 ROR2Q01974 943 aaKnown RBP11.78□□□□□ -0.52
SNX1-214ENST00000625244 STX3Q13277 289 aa11.78□□□□□ -0.52
SNX1-214ENST00000625244 GPR68Q15743 365 aa11.78□□□□□ -0.52
SNX1-214ENST00000625244 ZNF141Q15928 474 aa11.78□□□□□ -0.52
SNX1-214ENST00000625244 SAMD5Q5TGI4 173 aa11.78□□□□□ -0.52
SNX1-214ENST00000625244 OLIG3Q7RTU3 272 aa11.78□□□□□ -0.52
SNX1-214ENST00000625244 PPCDCQ96CD2 204 aa11.78□□□□□ -0.52
SNX1-214ENST00000625244 ZNF764Q96H86 408 aaPredicted RBP11.78□□□□□ -0.52
SNX1-214ENST00000625244 SDF2Q99470 211 aa11.78□□□□□ -0.52
SNX1-214ENST00000625244 GAL3ST1Q99999 423 aa11.78□□□□□ -0.52
SNX1-214ENST00000625244 NMUR2Q9GZQ4 415 aa11.78□□□□□ -0.52
SNX1-214ENST00000625244 TNFRSF19Q9NS68 423 aa11.78□□□□□ -0.52
SNX1-214ENST00000625244 GPATCH2Q9NW75 528 aa11.78□□□□□ -0.52
SNX1-214ENST00000625244 FIS1Q9Y3D6 152 aa11.78□□□□□ -0.52
SNX1-214ENST00000625244 TMED7-TICAM2A0A0A6YYA0 188 aa11.77□□□□□ -0.53
SNX1-214ENST00000625244 IGHV1-69-2A0A0G2JMI3 117 aa11.77□□□□□ -0.53
SNX1-214ENST00000625244 CLDN25C9JDP6 229 aa11.77□□□□□ -0.53
SNX1-214ENST00000625244 TRAPPC2LH3BP13 241 aa11.77□□□□□ -0.53
SNX1-214ENST00000625244 FCMRO60667 390 aa11.77□□□□□ -0.53
SNX1-214ENST00000625244 TBX19O60806 448 aa11.77□□□□□ -0.53
SNX1-214ENST00000625244 UGT2B17O75795 530 aa11.77□□□□□ -0.53
SNX1-214ENST00000625244 BGNP21810 368 aa11.77□□□□□ -0.53
SNX1-214ENST00000625244 PGM1P36871 562 aa11.77□□□□□ -0.53
SNX1-214ENST00000625244 CAPZA2P47755 286 aa11.77□□□□□ -0.53
SNX1-214ENST00000625244 SH3BGRP55822 239 aaPredicted RBP11.77□□□□□ -0.53
SNX1-214ENST00000625244 ABCE1P61221 599 aaKnown RBP11.77□□□□□ -0.53
SNX1-214ENST00000625244 MPP2Q14168 576 aa11.77□□□□□ -0.53
SNX1-214ENST00000625244 FXNQ16595 210 aa11.77□□□□□ -0.53
SNX1-214ENST00000625244 C11orf87Q6NUJ2 197 aa11.77□□□□□ -0.53
SNX1-214ENST00000625244 NIPAL3Q6P499 406 aa11.77□□□□□ -0.53
SNX1-214ENST00000625244 FIP1L1Q6UN15 594 aaKnown RBP11.77□□□□□ -0.53
SNX1-214ENST00000625244 CREB3L2Q70SY1 520 aa11.77□□□□□ -0.53
SNX1-214ENST00000625244 EIF3MQ7L2H7 374 aaKnown RBP11.77□□□□□ -0.53
SNX1-214ENST00000625244 FAM71CQ8NEG0 241 aa11.77□□□□□ -0.53
SNX1-214ENST00000625244 BHLHE22Q8NFJ8 381 aaPredicted RBP11.77□□□□□ -0.53
SNX1-214ENST00000625244 DDIT4LQ96D03 193 aa11.77□□□□□ -0.53
SNX1-214ENST00000625244 ZNF837Q96EG3 531 aaPredicted RBP11.77□□□□□ -0.53
SNX1-214ENST00000625244 RASSF4Q9H2L5 321 aa11.77□□□□□ -0.53
SNX1-214ENST00000625244 PIF1Q9H611 641 aa11.77□□□□□ -0.53
SNX1-214ENST00000625244 REEP4Q9H6H4 257 aa11.77□□□□□ -0.53
SNX1-214ENST00000625244 MED4Q9NPJ6 270 aa11.77□□□□□ -0.53
SNX1-214ENST00000625244 UBAP1Q9NZ09 502 aa11.77□□□□□ -0.53
SNX1-214ENST00000625244 KLHL21Q9UJP4 597 aa11.77□□□□□ -0.53
SNX1-214ENST00000625244 ZNF346Q9UL40 294 aaKnown RBP11.77□□□□□ -0.53
SNX1-214ENST00000625244 PCDHGB4Q9UN71 923 aa11.77□□□□□ -0.53
SNX1-214ENST00000625244 TMED7Q9Y3B3 224 aa11.77□□□□□ -0.53
SNX1-214ENST00000625244 RNF114Q9Y508 228 aa11.77□□□□□ -0.53
SNX1-214ENST00000625244 NOX1Q9Y5S8 564 aa11.77□□□□□ -0.53
SNX1-214ENST00000625244 AQP7P3A6NL99 342 aa11.76□□□□□ -0.53
SNX1-214ENST00000625244 C17orf100A8MU93 164 aa11.76□□□□□ -0.53
SNX1-214ENST00000625244 SLC28A1O00337 649 aa11.76□□□□□ -0.53
SNX1-214ENST00000625244 DYNC1I1O14576 645 aa11.76□□□□□ -0.53
SNX1-214ENST00000625244 FOXH1O75593 365 aa11.76□□□□□ -0.53
SNX1-214ENST00000625244 CRYBA1P05813 215 aa11.76□□□□□ -0.53
SNX1-214ENST00000625244 CHRNGP07510 517 aa11.76□□□□□ -0.53
SNX1-214ENST00000625244 FGF4P08620 206 aa11.76□□□□□ -0.53
SNX1-214ENST00000625244 ZNF12P17014 697 aa11.76□□□□□ -0.53
SNX1-214ENST00000625244 SLC1A6P48664 564 aa11.76□□□□□ -0.53
SNX1-214ENST00000625244 P2RY4P51582 365 aa11.76□□□□□ -0.53
SNX1-214ENST00000625244 TP53BP2Q13625 1128 aa11.76□□□□□ -0.53
SNX1-214ENST00000625244 CEACAM7Q14002 265 aa11.76□□□□□ -0.53
SNX1-214ENST00000625244 KIAA0040Q15053 153 aa11.76□□□□□ -0.53
SNX1-214ENST00000625244 MAPK14Q16539 360 aa11.76□□□□□ -0.53
SNX1-214ENST00000625244 NKPD1Q17RQ9 610 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms