RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 GPRIN2O60269 458 aa15.39■□□□□ 0.05
SHKBP1-203ENST00000594298 IGHV3-9P01782 118 aa15.39■□□□□ 0.05
SHKBP1-203ENST00000594298 IMPDH2P12268 514 aa15.39■□□□□ 0.05
SHKBP1-203ENST00000594298 CD247P20963 164 aa15.39■□□□□ 0.05
SHKBP1-203ENST00000594298 PTNP21246 168 aa15.39■□□□□ 0.05
SHKBP1-203ENST00000594298 KDELR2P33947 212 aa15.39■□□□□ 0.05
SHKBP1-203ENST00000594298 NTF4P34130 210 aa15.39■□□□□ 0.05
SHKBP1-203ENST00000594298 MNAT1P51948 309 aa15.39■□□□□ 0.05
SHKBP1-203ENST00000594298 SLC7A2P52569 658 aa15.39■□□□□ 0.05
SHKBP1-203ENST00000594298 PSME3P61289 254 aa15.39■□□□□ 0.05
SHKBP1-203ENST00000594298 BNIP2Q12982 314 aa15.39■□□□□ 0.05
SHKBP1-203ENST00000594298 CEACAM7Q14002 265 aa15.39■□□□□ 0.05
SHKBP1-203ENST00000594298 TMEM249Q2WGJ8 235 aa15.39■□□□□ 0.05
SHKBP1-203ENST00000594298 SWT1Q5T5J6 900 aaKnown RBP15.39■□□□□ 0.05
SHKBP1-203ENST00000594298 OR7E24Q6IFN5 339 aa15.39■□□□□ 0.05
SHKBP1-203ENST00000594298 SLC22A25Q6T423 547 aa15.39■□□□□ 0.05
SHKBP1-203ENST00000594298 PAQR6Q6TCH4 344 aa15.39■□□□□ 0.05
SHKBP1-203ENST00000594298 CLEC2AQ6UVW9 174 aa15.39■□□□□ 0.05
SHKBP1-203ENST00000594298 COMTD1Q86VU5 262 aa15.39■□□□□ 0.05
SHKBP1-203ENST00000594298 UBE2J2Q8N2K1 259 aa15.39■□□□□ 0.05
SHKBP1-203ENST00000594298 MUC15Q8N387 334 aa15.39■□□□□ 0.05
SHKBP1-203ENST00000594298 GPR32P1Q8NGA4 272 aa15.39■□□□□ 0.05
SHKBP1-203ENST00000594298 OR52N5Q8NH56 324 aa15.39■□□□□ 0.05
SHKBP1-203ENST00000594298 TMEM158Q8WZ71 300 aa15.39■□□□□ 0.05
SHKBP1-203ENST00000594298 TNFRSF13CQ96RJ3 184 aa15.39■□□□□ 0.05
SHKBP1-203ENST00000594298 TMEM160Q9NX00 188 aa15.39■□□□□ 0.05
SHKBP1-203ENST00000594298 TAGLN3Q9UI15 199 aa15.39■□□□□ 0.05
SHKBP1-203ENST00000594298 SONP18583 2426 aaKnown RBP15.39■□□□□ 0.05
SHKBP1-203ENST00000594298 LIPT2A6NK58 231 aa15.38■□□□□ 0.05
SHKBP1-203ENST00000594298 H7C417 338 aa15.38■□□□□ 0.05
SHKBP1-203ENST00000594298 M0R3H8 397 aa15.38■□□□□ 0.05
SHKBP1-203ENST00000594298 FAM157CP0CG43 387 aa15.38■□□□□ 0.05
SHKBP1-203ENST00000594298 HTR2AP28223 471 aa15.38■□□□□ 0.05
SHKBP1-203ENST00000594298 GTF2E2P29084 291 aaKnown RBP15.38■□□□□ 0.05
SHKBP1-203ENST00000594298 ZNF83P51522 516 aa15.38■□□□□ 0.05
SHKBP1-203ENST00000594298 H3F3AP84243 136 aa15.38■□□□□ 0.05
SHKBP1-203ENST00000594298 VLDLRP98155 873 aa15.38■□□□□ 0.05
SHKBP1-203ENST00000594298 SPOCK1Q08629 439 aa15.38■□□□□ 0.05
SHKBP1-203ENST00000594298 OR7A5Q15622 319 aa15.38■□□□□ 0.05
SHKBP1-203ENST00000594298 C1QTNF12Q5T7M4 302 aa15.38■□□□□ 0.05
SHKBP1-203ENST00000594298 ZNF544Q6NX49 715 aa15.38■□□□□ 0.05
SHKBP1-203ENST00000594298 C8orf82Q6P1X6 216 aaPredicted RBP15.38■□□□□ 0.05
SHKBP1-203ENST00000594298 ZNF613Q6PF04 617 aa15.38■□□□□ 0.05
SHKBP1-203ENST00000594298 B3GLCTQ6Y288 498 aa15.38■□□□□ 0.05
SHKBP1-203ENST00000594298 FBXL14Q8N1E6 418 aa15.38■□□□□ 0.05
SHKBP1-203ENST00000594298 DEPDC4Q8N2C3 294 aa15.38■□□□□ 0.05
SHKBP1-203ENST00000594298 CCDC197Q8NCU1 140 aa15.38■□□□□ 0.05
SHKBP1-203ENST00000594298 MFSD8Q8NHS3 518 aa15.38■□□□□ 0.05
SHKBP1-203ENST00000594298 LZICQ8WZA0 190 aa15.38■□□□□ 0.05
SHKBP1-203ENST00000594298 SLC38A4Q969I6 547 aa15.38■□□□□ 0.05
SHKBP1-203ENST00000594298 DNAJA3Q96EY1 480 aa15.38■□□□□ 0.05
SHKBP1-203ENST00000594298 EPYCQ99645 322 aa15.38■□□□□ 0.05
SHKBP1-203ENST00000594298 AMBRA1Q9C0C7 1298 aa15.38■□□□□ 0.05
SHKBP1-203ENST00000594298 SPAG4Q9NPE6 437 aa15.38■□□□□ 0.05
SHKBP1-203ENST00000594298 NDE1Q9NXR1 346 aa15.38■□□□□ 0.05
SHKBP1-203ENST00000594298 CDC42EP3Q9UKI2 254 aa15.38■□□□□ 0.05
SHKBP1-203ENST00000594298 POU2F3Q9UKI9 436 aa15.38■□□□□ 0.05
SHKBP1-203ENST00000594298 ABCA1O95477 2261 aa15.37■□□□□ 0.05
SHKBP1-203ENST00000594298 CUBNO60494 3623 aa15.37■□□□□ 0.05
SHKBP1-203ENST00000594298 A0A0B4J2E0 115 aa15.37■□□□□ 0.05
SHKBP1-203ENST00000594298 A0A1B0GX12 115 aa15.37■□□□□ 0.05
SHKBP1-203ENST00000594298 PDLIM1O00151 329 aa15.37■□□□□ 0.05
SHKBP1-203ENST00000594298 NPIPB7O75200 414 aa15.37■□□□□ 0.05
SHKBP1-203ENST00000594298 MRPL33O75394 65 aaKnown RBP15.37■□□□□ 0.05
SHKBP1-203ENST00000594298 GMNNO75496 209 aa15.37■□□□□ 0.05
SHKBP1-203ENST00000594298 VAMP5O95183 116 aa15.37■□□□□ 0.05
SHKBP1-203ENST00000594298 SLC25A16P16260 332 aa15.37■□□□□ 0.05
SHKBP1-203ENST00000594298 RAB35Q15286 201 aa15.37■□□□□ 0.05
SHKBP1-203ENST00000594298 GABRA6Q16445 453 aa15.37■□□□□ 0.05
SHKBP1-203ENST00000594298 LRRC23Q53EV4 343 aaPredicted RBP15.37■□□□□ 0.05
SHKBP1-203ENST00000594298 CYBRD1Q53TN4 286 aa15.37■□□□□ 0.05
SHKBP1-203ENST00000594298 OTUD3Q5T2D3 398 aaPredicted RBP15.37■□□□□ 0.05
SHKBP1-203ENST00000594298 OR6T1Q8NGN1 323 aa15.37■□□□□ 0.05
SHKBP1-203ENST00000594298 VANGL1Q8TAA9 524 aaPredicted RBP15.37■□□□□ 0.05
SHKBP1-203ENST00000594298 KCTD14Q9BQ13 255 aaPredicted RBP15.37■□□□□ 0.05
SHKBP1-203ENST00000594298 SF3B5Q9BWJ5 86 aaKnown RBP15.37■□□□□ 0.05
SHKBP1-203ENST00000594298 PRR14Q9BWN1 585 aa15.37■□□□□ 0.05
SHKBP1-203ENST00000594298 PARPBPQ9NWS1 579 aa15.37■□□□□ 0.05
SHKBP1-203ENST00000594298 ADPRHL2Q9NX46 363 aa15.37■□□□□ 0.05
SHKBP1-203ENST00000594298 USP22Q9UPT9 525 aa15.37■□□□□ 0.05
SHKBP1-203ENST00000594298 SH3GLB1Q9Y371 365 aa15.37■□□□□ 0.05
SHKBP1-203ENST00000594298 RTTNQ86VV8 2226 aa15.37■□□□□ 0.05
SHKBP1-203ENST00000594298 TRAV36DV7A0A075B6V5 113 aa15.36■□□□□ 0.05
SHKBP1-203ENST00000594298 A0A087WUJ7 227 aa15.36■□□□□ 0.05
SHKBP1-203ENST00000594298 NME4O00746 187 aa15.36■□□□□ 0.05
SHKBP1-203ENST00000594298 TPST2O60704 377 aa15.36■□□□□ 0.05
SHKBP1-203ENST00000594298 SHOX2O60902 331 aaPredicted RBP15.36■□□□□ 0.05
SHKBP1-203ENST00000594298 ITGA5P08648 1049 aa15.36■□□□□ 0.05
SHKBP1-203ENST00000594298 FABP6P51161 128 aa15.36■□□□□ 0.05
SHKBP1-203ENST00000594298 MFSD13AQ14CX5 517 aa15.36■□□□□ 0.05
SHKBP1-203ENST00000594298 ENTPD8Q5MY95 495 aa15.36■□□□□ 0.05
SHKBP1-203ENST00000594298 TMEM225Q6GV28 225 aa15.36■□□□□ 0.05
SHKBP1-203ENST00000594298 CCDC103Q8IW40 242 aa15.36■□□□□ 0.05
SHKBP1-203ENST00000594298 C17orf78Q8N4C9 275 aa15.36■□□□□ 0.05
SHKBP1-203ENST00000594298 WDR31Q8NA23 367 aa15.36■□□□□ 0.05
SHKBP1-203ENST00000594298 C1orf162Q8NEQ5 155 aaPredicted RBP15.36■□□□□ 0.05
SHKBP1-203ENST00000594298 OR6S1Q8NH40 331 aa15.36■□□□□ 0.05
SHKBP1-203ENST00000594298 SLC25A36Q96CQ1 311 aa15.36■□□□□ 0.05
SHKBP1-203ENST00000594298 POLR2J2Q9GZM3 115 aaKnown RBP15.36■□□□□ 0.05
SHKBP1-203ENST00000594298 POLR2J3Q9H1A7 115 aaKnown RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 830 ms