RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 ELOVL3Q9HB03 270 aa9.7□□□□□ -0.86
USB1-212ENST00000566082 COPS7AQ9UBW8 275 aa9.7□□□□□ -0.86
USB1-212ENST00000566082 NPIPA1Q9UND3 350 aa9.7□□□□□ -0.86
USB1-212ENST00000566082 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.7□□□□□ -0.86
USB1-212ENST00000566082 ZNF337Q9Y3M9 751 aa9.7□□□□□ -0.86
USB1-212ENST00000566082 LCTP09848 1927 aa9.7□□□□□ -0.86
USB1-212ENST00000566082 TCRBV16S1A1N1A0A5B0 115 aa9.69□□□□□ -0.86
USB1-212ENST00000566082 PRRT4C9JH25 899 aa9.69□□□□□ -0.86
USB1-212ENST00000566082 ADRA2AP08913 450 aa9.69□□□□□ -0.86
USB1-212ENST00000566082 RRASP10301 218 aa9.69□□□□□ -0.86
USB1-212ENST00000566082 CTGFP29279 349 aa9.69□□□□□ -0.86
USB1-212ENST00000566082 PRSS53Q2L4Q9 553 aa9.69□□□□□ -0.86
USB1-212ENST00000566082 SLC18B1Q6NT16 456 aa9.69□□□□□ -0.86
USB1-212ENST00000566082 THSD4Q6ZMP0 1018 aa9.69□□□□□ -0.86
USB1-212ENST00000566082 Q6ZTK2 550 aa9.69□□□□□ -0.86
USB1-212ENST00000566082 OR1J4Q8NGS1 313 aa9.69□□□□□ -0.86
USB1-212ENST00000566082 OR2AJ1Q8NGZ0 328 aa9.69□□□□□ -0.86
USB1-212ENST00000566082 WDR92Q96MX6 357 aa9.69□□□□□ -0.86
USB1-212ENST00000566082 C6orf106Q9H6K1 298 aaPredicted RBP9.69□□□□□ -0.86
USB1-212ENST00000566082 MBNL1Q9NR56 388 aaKnown RBP9.69□□□□□ -0.86
USB1-212ENST00000566082 CA5BQ9Y2D0 317 aa9.69□□□□□ -0.86
USB1-212ENST00000566082 A0A0B4J2A0 478 aa9.69□□□□□ -0.86
USB1-212ENST00000566082 PYCARD-AS1I3L0S3 204 aa9.69□□□□□ -0.86
USB1-212ENST00000566082 AIPO00170 330 aa9.69□□□□□ -0.86
USB1-212ENST00000566082 ADH1BP00325 375 aa9.69□□□□□ -0.86
USB1-212ENST00000566082 IFNA21P01568 189 aa9.69□□□□□ -0.86
USB1-212ENST00000566082 HOXB3P14651 431 aaPredicted RBP9.69□□□□□ -0.86
USB1-212ENST00000566082 RAB3AP20336 220 aa9.69□□□□□ -0.86
USB1-212ENST00000566082 SLC6A9P48067 706 aa9.69□□□□□ -0.86
USB1-212ENST00000566082 PLA1AQ53H76 456 aa9.69□□□□□ -0.86
USB1-212ENST00000566082 DNM1P34Q6PK57 102 aa9.69□□□□□ -0.86
USB1-212ENST00000566082 OR2AK2Q8NG84 335 aa9.69□□□□□ -0.86
USB1-212ENST00000566082 OR5T3Q8NGG3 340 aa9.69□□□□□ -0.86
USB1-212ENST00000566082 SHPKQ9UHJ6 478 aa9.69□□□□□ -0.86
USB1-212ENST00000566082 A0A0D9SG52 128 aa9.69□□□□□ -0.86
USB1-212ENST00000566082 SLC16A7O60669 478 aa9.69□□□□□ -0.86
USB1-212ENST00000566082 LIMS1P48059 325 aa9.69□□□□□ -0.86
USB1-212ENST00000566082 GPR18Q14330 331 aa9.69□□□□□ -0.86
USB1-212ENST00000566082 STX12Q86Y82 276 aa9.69□□□□□ -0.86
USB1-212ENST00000566082 ZNF547Q8IVP9 402 aa9.69□□□□□ -0.86
USB1-212ENST00000566082 OR9A4Q8NGU2 314 aa9.69□□□□□ -0.86
USB1-212ENST00000566082 WDR89Q96FK6 387 aaPredicted RBP9.69□□□□□ -0.86
USB1-212ENST00000566082 SCMH1Q96GD3 660 aa9.69□□□□□ -0.86
USB1-212ENST00000566082 SENP5Q96HI0 755 aaPredicted RBP9.69□□□□□ -0.86
USB1-212ENST00000566082 CXorf58Q96LI9 332 aa9.69□□□□□ -0.86
USB1-212ENST00000566082 ELF4Q99607 663 aaPredicted RBP9.69□□□□□ -0.86
USB1-212ENST00000566082 NKX3-1Q99801 234 aaPredicted RBP9.69□□□□□ -0.86
USB1-212ENST00000566082 APOOQ9BUR5 198 aa9.69□□□□□ -0.86
USB1-212ENST00000566082 PTDSS2Q9BVG9 487 aa9.69□□□□□ -0.86
USB1-212ENST00000566082 ZNF700Q9H0M5 742 aa9.69□□□□□ -0.86
USB1-212ENST00000566082 CREBZFQ9NS37 354 aa9.69□□□□□ -0.86
USB1-212ENST00000566082 APOBEC3BQ9UH17 382 aaKnown RBP9.69□□□□□ -0.86
USB1-212ENST00000566082 MAFFQ9ULX9 164 aa9.69□□□□□ -0.86
USB1-212ENST00000566082 SIRT4Q9Y6E7 314 aaPredicted RBP9.69□□□□□ -0.86
USB1-212ENST00000566082 SCN3AQ9NY46 2000 aa9.69□□□□□ -0.86
USB1-212ENST00000566082 LINC00862A6NCI5 91 aa9.68□□□□□ -0.86
USB1-212ENST00000566082 H0YGG7 62 aa9.68□□□□□ -0.86
USB1-212ENST00000566082 PLPP2O43688 288 aa9.68□□□□□ -0.86
USB1-212ENST00000566082 TGM6O95932 706 aa9.68□□□□□ -0.86
USB1-212ENST00000566082 UBL4AP11441 157 aa9.68□□□□□ -0.86
USB1-212ENST00000566082 CD53P19397 219 aa9.68□□□□□ -0.86
USB1-212ENST00000566082 ACHEP22303 614 aa9.68□□□□□ -0.86
USB1-212ENST00000566082 RBMXP38159 391 aaKnown RBP9.68□□□□□ -0.86
USB1-212ENST00000566082 ARF3P61204 181 aaPredicted RBP9.68□□□□□ -0.86
USB1-212ENST00000566082 RASGEF1BQ0VAM2 473 aa9.68□□□□□ -0.86
USB1-212ENST00000566082 ALKBH1Q13686 389 aaKnown RBP9.68□□□□□ -0.86
USB1-212ENST00000566082 CLVS2Q5SYC1 327 aa9.68□□□□□ -0.86
USB1-212ENST00000566082 RNLSQ5VYX0 342 aa9.68□□□□□ -0.86
USB1-212ENST00000566082 TMEM215Q68D42 235 aa9.68□□□□□ -0.86
USB1-212ENST00000566082 TMEM81Q6P7N7 255 aa9.68□□□□□ -0.86
USB1-212ENST00000566082 SSX6Q7RTT6 188 aa9.68□□□□□ -0.86
USB1-212ENST00000566082 TTC9Q92623 222 aa9.68□□□□□ -0.86
USB1-212ENST00000566082 SMARCD2Q92925 531 aa9.68□□□□□ -0.86
USB1-212ENST00000566082 FBXW5Q969U6 566 aa9.68□□□□□ -0.86
USB1-212ENST00000566082 PELI1Q96FA3 418 aa9.68□□□□□ -0.86
USB1-212ENST00000566082 MYADMQ96S97 322 aa9.68□□□□□ -0.86
USB1-212ENST00000566082 EIF5A2Q9GZV4 153 aaKnown RBP9.68□□□□□ -0.86
USB1-212ENST00000566082 ZNF768Q9H5H4 540 aaKnown RBP9.68□□□□□ -0.86
USB1-212ENST00000566082 MEPEQ9NQ76 525 aaPredicted RBP9.68□□□□□ -0.86
USB1-212ENST00000566082 MAN2C1Q9NTJ4 1040 aa9.68□□□□□ -0.86
USB1-212ENST00000566082 TAS2R5Q9NYW4 299 aa9.68□□□□□ -0.86
USB1-212ENST00000566082 KIF25Q9UIL4 384 aa9.68□□□□□ -0.86
USB1-212ENST00000566082 ELF5Q9UKW6 265 aaPredicted RBP9.68□□□□□ -0.86
USB1-212ENST00000566082 A0A0A6YYD5 115 aa9.68□□□□□ -0.86
USB1-212ENST00000566082 FITM1A5D6W6 292 aa9.68□□□□□ -0.86
USB1-212ENST00000566082 C1orf196B1AJZ1 125 aa9.68□□□□□ -0.86
USB1-212ENST00000566082 SULT1B1O43704 296 aa9.68□□□□□ -0.86
USB1-212ENST00000566082 ADRB1P08588 477 aa9.68□□□□□ -0.86
USB1-212ENST00000566082 SLC2A5P22732 501 aa9.68□□□□□ -0.86
USB1-212ENST00000566082 RHOUQ7L0Q8 258 aa9.68□□□□□ -0.86
USB1-212ENST00000566082 OR11H4Q8NGC9 324 aa9.68□□□□□ -0.86
USB1-212ENST00000566082 OR10R2Q8NGX6 335 aa9.68□□□□□ -0.86
USB1-212ENST00000566082 SLC2A12Q8TD20 617 aa9.68□□□□□ -0.86
USB1-212ENST00000566082 FOXRED1Q96CU9 486 aaPredicted RBP9.68□□□□□ -0.86
USB1-212ENST00000566082 WDR34Q96EX3 536 aa9.68□□□□□ -0.86
USB1-212ENST00000566082 NECAB3Q96P71 396 aaPredicted RBP9.68□□□□□ -0.86
USB1-212ENST00000566082 ZNF587Q96SQ5 575 aaPredicted RBP9.68□□□□□ -0.86
USB1-212ENST00000566082 ARHGDIGQ99819 225 aa9.68□□□□□ -0.86
USB1-212ENST00000566082 RGCCQ9H4X1 137 aa9.68□□□□□ -0.86
USB1-212ENST00000566082 ZNF701Q9NV72 531 aaPredicted RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms