RNA–Protein interactions for RNA: ENST00000557768.1

HNRNPC-233, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-233ENST00000557768 OPN3Q9H1Y3 402 aaPredicted RBP4.81□□□□□ -1.64
HNRNPC-233ENST00000557768 PPP1R3EQ9H7J1 279 aa4.81□□□□□ -1.64
HNRNPC-233ENST00000557768 DDX31Q9H8H2 851 aaKnown RBP4.81□□□□□ -1.64
HNRNPC-233ENST00000557768 ACTR8Q9H981 624 aa4.81□□□□□ -1.64
HNRNPC-233ENST00000557768 WDR41Q9HAD4 459 aa4.81□□□□□ -1.64
HNRNPC-233ENST00000557768 ZNF226Q9NYT6 803 aa4.81□□□□□ -1.64
HNRNPC-233ENST00000557768 NUDT4Q9NZJ9 180 aa4.81□□□□□ -1.64
HNRNPC-233ENST00000557768 KLRF1Q9NZS2 232 aa4.81□□□□□ -1.64
HNRNPC-233ENST00000557768 TXNDC16Q9P2K2 825 aa4.81□□□□□ -1.64
HNRNPC-233ENST00000557768 HEY2Q9UBP5 337 aa4.81□□□□□ -1.64
HNRNPC-233ENST00000557768 BCAP29Q9UHQ4 241 aa4.81□□□□□ -1.64
HNRNPC-233ENST00000557768 SNX12Q9UMY4 172 aa4.81□□□□□ -1.64
HNRNPC-233ENST00000557768 LIPT1Q9Y234 373 aa4.81□□□□□ -1.64
HNRNPC-233ENST00000557768 ANGPTL3Q9Y5C1 460 aa4.81□□□□□ -1.64
HNRNPC-233ENST00000557768 STAB1Q9NY15 2570 aa4.81□□□□□ -1.64
HNRNPC-233ENST00000557768 SLC22A20A6NK97 555 aa4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 C17orf51A8MQB3 221 aa4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 B4DXG7 233 aa4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 E7ESA3 106 aa4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 H0YC42 278 aa4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 H0YIV9 168 aa4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 CDH16O75309 829 aa4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 CRLF1O75462 422 aa4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 CBR3O75828 277 aa4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 KLK1P06870 262 aa4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 SNRNP70P08621 437 aaKnown RBP4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 RHOXF2BP0C7M4 288 aa4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 CPMP14384 443 aa4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 POU2F1P14859 743 aa4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 ZNF708P17019 499 aa4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 NAGAP17050 411 aa4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 S1PR1P21453 382 aa4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 CRYGSP22914 178 aa4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 MYF6P23409 242 aa4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 LOXP28300 417 aaPredicted RBP4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 UGT2B10P36537 528 aa4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 FEN1P39748 380 aaKnown RBP4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 CD79BP40259 229 aa4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 LHX2P50458 406 aa4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 TPD52P55327 224 aaPredicted RBP4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 CLDN18P56856 261 aa4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 B3GALT5-AS1P59052 145 aa4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 BPIFB3P59826 476 aa4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 EEF1A1P68104 462 aaKnown RBP4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 PHEXP78562 749 aa4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 MRPS25P82663 173 aaKnown RBP4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 HMGCS1Q01581 520 aa4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 DR1Q01658 176 aa4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 KRTAP1-1Q07627 177 aa4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 SPOCK1Q08629 439 aa4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 PLCXD2Q0VAA5 305 aa4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 CUL3Q13618 768 aa4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 LTB4RQ15722 352 aa4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 ZKSCAN8Q15776 578 aaPredicted RBP4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 C2orf76Q3KRA6 126 aa4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 MTX3Q5HYI7 312 aa4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 CEP78Q5JTW2 689 aa4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 EEF1A1P5Q5VTE0 462 aa4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 ZBTB49Q6ZSB9 765 aa4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 PLEKHM3Q6ZWE6 761 aa4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 CMC1Q7Z7K0 106 aa4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 NUDT13Q86X67 352 aa4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 MAPK1IP1LQ8NDC0 245 aa4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 C17orf47Q8NEP4 570 aa4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 OR7G1Q8NGA0 311 aa4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 PYROXD1Q8WU10 500 aa4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 UBTD2Q8WUN7 234 aa4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 FIG4Q92562 907 aa4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 TMBIM1Q969X1 311 aa4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 PGM2Q96G03 612 aa4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 MARK4Q96L34 752 aa4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 SFXN2Q96NB2 322 aa4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 ATOH8Q96SQ7 321 aa4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 ABHD6Q9BV23 337 aa4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 RAD21L1Q9H4I0 556 aa4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 MAGIXQ9H6Y5 334 aa4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 NMRAL1Q9HBL8 299 aa4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 NRIP3Q9NQ35 241 aa4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 FBXL2Q9UKC9 423 aa4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 DLGAP4Q9Y2H0 992 aa4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 PLLPQ9Y342 182 aa4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 SNX24Q9Y343 169 aa4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 RNF11Q9Y3C5 154 aa4.8□□□□□ -1.64
HNRNPC-233ENST00000557768 TRBV5-3A0A0A0MS03 114 aa4.79□□□□□ -1.64
HNRNPC-233ENST00000557768 TCRBV9S1A1TA0A576 114 aa4.79□□□□□ -1.64
HNRNPC-233ENST00000557768 FAM159BA6NKW6 160 aa4.79□□□□□ -1.64
HNRNPC-233ENST00000557768 RNF212BA8MTL3 300 aa4.79□□□□□ -1.64
HNRNPC-233ENST00000557768 C16orf97H3BN30 126 aa4.79□□□□□ -1.64
HNRNPC-233ENST00000557768 CCDC188H7C350 402 aa4.79□□□□□ -1.64
HNRNPC-233ENST00000557768 FOXE1O00358 373 aaPredicted RBP4.79□□□□□ -1.64
HNRNPC-233ENST00000557768 OR7A17O14581 309 aa4.79□□□□□ -1.64
HNRNPC-233ENST00000557768 ACOX3O15254 700 aa4.79□□□□□ -1.64
HNRNPC-233ENST00000557768 PLPP2O43688 288 aa4.79□□□□□ -1.64
HNRNPC-233ENST00000557768 ZIC3O60481 467 aa4.79□□□□□ -1.64
HNRNPC-233ENST00000557768 REM1O75628 298 aa4.79□□□□□ -1.64
HNRNPC-233ENST00000557768 SIX3O95343 332 aaPredicted RBP4.79□□□□□ -1.64
HNRNPC-233ENST00000557768 GFAPP14136 432 aa4.79□□□□□ -1.64
HNRNPC-233ENST00000557768 DRD5P21918 477 aa4.79□□□□□ -1.64
HNRNPC-233ENST00000557768 SRD5A2P31213 254 aa4.79□□□□□ -1.64
HNRNPC-233ENST00000557768 ZNF81P51508 661 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms