RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 KDM7AQ6ZMT4 941 aa0.7□□□□□ -2.3
FOXN3-216ENST00000557496 CENPUQ71F23 418 aa0.7□□□□□ -2.3
FOXN3-216ENST00000557496 DPY19L4Q7Z388 723 aa0.7□□□□□ -2.3
FOXN3-216ENST00000557496 ZNF546Q86UE3 836 aa0.7□□□□□ -2.3
FOXN3-216ENST00000557496 THOC6Q86W42 341 aaKnown RBP0.7□□□□□ -2.3
FOXN3-216ENST00000557496 SNX32Q86XE0 403 aa0.7□□□□□ -2.3
FOXN3-216ENST00000557496 OR10A7Q8NGE5 316 aa0.7□□□□□ -2.3
FOXN3-216ENST00000557496 KRT35Q92764 455 aa0.7□□□□□ -2.3
FOXN3-216ENST00000557496 SMIM10Q96HG1 83 aa0.7□□□□□ -2.3
FOXN3-216ENST00000557496 NARS2Q96I59 477 aaKnown RBP0.7□□□□□ -2.3
FOXN3-216ENST00000557496 VPS35Q96QK1 796 aa0.7□□□□□ -2.3
FOXN3-216ENST00000557496 CAPS2Q9BXY5 557 aa0.7□□□□□ -2.3
FOXN3-216ENST00000557496 YY1AP1Q9H869 796 aa0.7□□□□□ -2.3
FOXN3-216ENST00000557496 GPATCH2LQ9NWQ4 482 aa0.7□□□□□ -2.3
FOXN3-216ENST00000557496 SIGLEC8Q9NYZ4 499 aa0.7□□□□□ -2.3
FOXN3-216ENST00000557496 XCL2Q9UBD3 114 aa0.7□□□□□ -2.3
FOXN3-216ENST00000557496 B9D1Q9UPM9 204 aa0.7□□□□□ -2.3
FOXN3-216ENST00000557496 NUDCQ9Y266 331 aa0.7□□□□□ -2.3
FOXN3-216ENST00000557496 ZNF407Q9C0G0 2248 aa0.7□□□□□ -2.3
FOXN3-216ENST00000557496 MUC16Q8WXI7 14507 aa0.7□□□□□ -2.3
FOXN3-216ENST00000557496 UGT1A9O60656 530 aa0.69□□□□□ -2.3
FOXN3-216ENST00000557496 C1GALT1C1LP0DN25 315 aa0.69□□□□□ -2.3
FOXN3-216ENST00000557496 KIF5BP33176 963 aa0.69□□□□□ -2.3
FOXN3-216ENST00000557496 NCBP2P52298 156 aaKnown RBP eCLIP0.69□□□□□ -2.3
FOXN3-216ENST00000557496 ACTN3Q08043 901 aaPredicted RBP0.69□□□□□ -2.3
FOXN3-216ENST00000557496 C2orf76Q3KRA6 126 aa0.69□□□□□ -2.3
FOXN3-216ENST00000557496 LDLRAP1Q5SW96 308 aa0.69□□□□□ -2.3
FOXN3-216ENST00000557496 HES5Q5TA89 166 aa0.69□□□□□ -2.3
FOXN3-216ENST00000557496 SPINT4Q6UDR6 99 aa0.69□□□□□ -2.3
FOXN3-216ENST00000557496 AFTPHQ6ULP2 937 aa0.69□□□□□ -2.3
FOXN3-216ENST00000557496 HSDL2Q6YN16 418 aa0.69□□□□□ -2.3
FOXN3-216ENST00000557496 CCDC91Q7Z6B0 441 aa0.69□□□□□ -2.3
FOXN3-216ENST00000557496 OR2L13Q8N349 312 aa0.69□□□□□ -2.3
FOXN3-216ENST00000557496 STPG2Q8N412 459 aa0.69□□□□□ -2.3
FOXN3-216ENST00000557496 LRRC52Q8N7C0 313 aa0.69□□□□□ -2.3
FOXN3-216ENST00000557496 CNNM3Q8NE01 707 aa0.69□□□□□ -2.3
FOXN3-216ENST00000557496 DENND6BQ8NEG7 585 aa0.69□□□□□ -2.3
FOXN3-216ENST00000557496 C1orf64Q8NEQ6 169 aa0.69□□□□□ -2.3
FOXN3-216ENST00000557496 VN1R2Q8NFZ6 395 aa0.69□□□□□ -2.3
FOXN3-216ENST00000557496 OR4D9Q8NGE8 314 aa0.69□□□□□ -2.3
FOXN3-216ENST00000557496 TMEM186Q96B77 213 aa0.69□□□□□ -2.3
FOXN3-216ENST00000557496 MRPL45Q9BRJ2 306 aaKnown RBP0.69□□□□□ -2.3
FOXN3-216ENST00000557496 GSDMCQ9BYG8 508 aa0.69□□□□□ -2.3
FOXN3-216ENST00000557496 ACTR6Q9GZN1 396 aa0.69□□□□□ -2.3
FOXN3-216ENST00000557496 NXF5Q9H1B4 397 aaKnown RBP0.69□□□□□ -2.3
FOXN3-216ENST00000557496 ACTR8Q9H981 624 aa0.69□□□□□ -2.3
FOXN3-216ENST00000557496 KCNIP1Q9NZI2 227 aa0.69□□□□□ -2.3
FOXN3-216ENST00000557496 WDR62O43379 1518 aa0.69□□□□□ -2.3
FOXN3-216ENST00000557496 UBE4BO95155 1302 aa0.68□□□□□ -2.3
FOXN3-216ENST00000557496 DDX39AO00148 427 aaKnown RBP0.68□□□□□ -2.3
FOXN3-216ENST00000557496 OPRK1P41145 380 aa0.68□□□□□ -2.3
FOXN3-216ENST00000557496 NAMPTP43490 491 aa0.68□□□□□ -2.3
FOXN3-216ENST00000557496 SLC11A1P49279 550 aa0.68□□□□□ -2.3
FOXN3-216ENST00000557496 CYB561P49447 251 aa0.68□□□□□ -2.3
FOXN3-216ENST00000557496 GPM6AP51674 278 aa0.68□□□□□ -2.3
FOXN3-216ENST00000557496 AP3M2P53677 418 aa0.68□□□□□ -2.3
FOXN3-216ENST00000557496 PRRX1P54821 245 aa0.68□□□□□ -2.3
FOXN3-216ENST00000557496 ADARB1P78563 741 aaKnown RBP0.68□□□□□ -2.3
FOXN3-216ENST00000557496 PLD1Q13393 1074 aa0.68□□□□□ -2.3
FOXN3-216ENST00000557496 TRIP10Q15642 601 aa0.68□□□□□ -2.3
FOXN3-216ENST00000557496 ZBED5Q49AG3 693 aa0.68□□□□□ -2.3
FOXN3-216ENST00000557496 FAM78AQ5JUQ0 283 aa0.68□□□□□ -2.3
FOXN3-216ENST00000557496 NIPAL3Q6P499 406 aa0.68□□□□□ -2.3
FOXN3-216ENST00000557496 SMARCD3Q6STE5 483 aa0.68□□□□□ -2.3
FOXN3-216ENST00000557496 NCCRP1Q6ZVX7 275 aaPredicted RBP0.68□□□□□ -2.3
FOXN3-216ENST00000557496 IQCA1Q86XH1 822 aa0.68□□□□□ -2.3
FOXN3-216ENST00000557496 LRRC43Q8N309 656 aa0.68□□□□□ -2.3
FOXN3-216ENST00000557496 Q8NDZ9 215 aa0.68□□□□□ -2.3
FOXN3-216ENST00000557496 TMEM104Q8NE00 496 aa0.68□□□□□ -2.3
FOXN3-216ENST00000557496 FGF14Q92915 247 aa0.68□□□□□ -2.3
FOXN3-216ENST00000557496 DNAJC1Q96KC8 554 aaKnown RBP0.68□□□□□ -2.3
FOXN3-216ENST00000557496 CABS1Q96KC9 395 aa0.68□□□□□ -2.3
FOXN3-216ENST00000557496 TSSK3Q96PN8 268 aa0.68□□□□□ -2.3
FOXN3-216ENST00000557496 CCT7Q99832 543 aa0.68□□□□□ -2.3
FOXN3-216ENST00000557496 XPO4Q9C0E2 1151 aaKnown RBP0.68□□□□□ -2.3
FOXN3-216ENST00000557496 DHCR7Q9UBM7 475 aaKnown RBP0.68□□□□□ -2.3
FOXN3-216ENST00000557496 SEC14L3Q9UDX4 400 aa0.68□□□□□ -2.3
FOXN3-216ENST00000557496 CDH9Q9ULB4 789 aa0.68□□□□□ -2.3
FOXN3-216ENST00000557496 RASD1Q9Y272 281 aa0.68□□□□□ -2.3
FOXN3-216ENST00000557496 AK6Q9Y3D8 172 aaKnown RBP0.68□□□□□ -2.3
FOXN3-216ENST00000557496 RPL36Q9Y3U8 105 aaKnown RBP0.68□□□□□ -2.3
FOXN3-216ENST00000557496 SORL1Q92673 2214 aa0.68□□□□□ -2.3
FOXN3-216ENST00000557496 SEC16AO15027 2179 aa0.67□□□□□ -2.3
FOXN3-216ENST00000557496 AHNAK2Q8IVF2 5795 aa0.67□□□□□ -2.3
FOXN3-216ENST00000557496 A0A0U1RQV5 110 aa0.67□□□□□ -2.3
FOXN3-216ENST00000557496 A0A1W2PNV4 684 aa0.67□□□□□ -2.3
FOXN3-216ENST00000557496 A0A1W2PRQ8 180 aa0.67□□□□□ -2.3
FOXN3-216ENST00000557496 CTAGE5O15320 804 aa0.67□□□□□ -2.3
FOXN3-216ENST00000557496 BCAS1O75363 584 aaPredicted RBP0.67□□□□□ -2.3
FOXN3-216ENST00000557496 SLC25A14O95258 325 aaPredicted RBP0.67□□□□□ -2.3
FOXN3-216ENST00000557496 IGHG4P01861 327 aa0.67□□□□□ -2.3
FOXN3-216ENST00000557496 FOLR1P15328 257 aa0.67□□□□□ -2.3
FOXN3-216ENST00000557496 SOX6P35712 828 aa0.67□□□□□ -2.3
FOXN3-216ENST00000557496 HPCAL1P37235 193 aa0.67□□□□□ -2.3
FOXN3-216ENST00000557496 PKNOX1P55347 436 aa0.67□□□□□ -2.3
FOXN3-216ENST00000557496 TNFRSF17Q02223 184 aa0.67□□□□□ -2.3
FOXN3-216ENST00000557496 RBMY1FQ15415 496 aaKnown RBP0.67□□□□□ -2.3
FOXN3-216ENST00000557496 LINC00173Q6ZV60 143 aa0.67□□□□□ -2.3
FOXN3-216ENST00000557496 STRADAQ7RTN6 431 aa0.67□□□□□ -2.3
FOXN3-216ENST00000557496 ZADH2Q8N4Q0 377 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms