RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 HIKESHIQ53FT3 197 aa14.14□□□□□ -0.15
DDX55-212ENST00000544738 C11orf71Q6IPW1 123 aa14.14□□□□□ -0.15
DDX55-212ENST00000544738 LSRQ86X29 649 aaPredicted RBP14.14□□□□□ -0.15
DDX55-212ENST00000544738 HIPK4Q8NE63 616 aa14.14□□□□□ -0.15
DDX55-212ENST00000544738 OR1K1Q8NGR3 316 aa14.14□□□□□ -0.15
DDX55-212ENST00000544738 CKAP2Q8WWK9 683 aa14.14□□□□□ -0.15
DDX55-212ENST00000544738 SLC47A1Q96FL8 570 aa14.14□□□□□ -0.15
DDX55-212ENST00000544738 C1orf159Q96HA4 380 aa14.14□□□□□ -0.15
DDX55-212ENST00000544738 MAGEB18Q96M61 343 aa14.14□□□□□ -0.15
DDX55-212ENST00000544738 CACNG6Q9BXT2 260 aa14.14□□□□□ -0.15
DDX55-212ENST00000544738 TMEM27Q9HBJ8 222 aa14.14□□□□□ -0.15
DDX55-212ENST00000544738 ARGLU1Q9NWB6 273 aaPredicted RBP14.14□□□□□ -0.15
DDX55-212ENST00000544738 TRIM33Q9UPN9 1127 aa14.14□□□□□ -0.15
DDX55-212ENST00000544738 YLPM1P49750 1951 aaKnown RBP14.14□□□□□ -0.15
DDX55-212ENST00000544738 TRAV36DV7A0A075B6V5 113 aa14.13□□□□□ -0.15
DDX55-212ENST00000544738 LOC102725191A0A1B0GVB3 256 aa14.13□□□□□ -0.15
DDX55-212ENST00000544738 H7C417 338 aa14.13□□□□□ -0.15
DDX55-212ENST00000544738 AKAP8O43823 692 aaKnown RBP14.13□□□□□ -0.15
DDX55-212ENST00000544738 TPST1O60507 370 aa14.13□□□□□ -0.15
DDX55-212ENST00000544738 SLC25A16P16260 332 aa14.13□□□□□ -0.15
DDX55-212ENST00000544738 HNF1AP20823 631 aa14.13□□□□□ -0.15
DDX55-212ENST00000544738 HTR2AP28223 471 aa14.13□□□□□ -0.15
DDX55-212ENST00000544738 CLDN17P56750 224 aa14.13□□□□□ -0.15
DDX55-212ENST00000544738 RGS8P57771 180 aaPredicted RBP14.13□□□□□ -0.15
DDX55-212ENST00000544738 UBE2NP61088 152 aaKnown RBP14.13□□□□□ -0.15
DDX55-212ENST00000544738 C1DQ13901 141 aaKnown RBP14.13□□□□□ -0.15
DDX55-212ENST00000544738 ADRM1Q16186 407 aa14.13□□□□□ -0.15
DDX55-212ENST00000544738 TBRG1Q3YBR2 411 aa14.13□□□□□ -0.15
DDX55-212ENST00000544738 RUNDC3AQ59EK9 446 aa14.13□□□□□ -0.15
DDX55-212ENST00000544738 FAM166AQ6J272 317 aa14.13□□□□□ -0.15
DDX55-212ENST00000544738 ANKRD16Q6P6B7 361 aa14.13□□□□□ -0.15
DDX55-212ENST00000544738 DLEU7Q6UYE1 221 aa14.13□□□□□ -0.15
DDX55-212ENST00000544738 H1FNTQ75WM6 255 aaPredicted RBP14.13□□□□□ -0.15
DDX55-212ENST00000544738 ARMC8Q8IUR7 673 aa14.13□□□□□ -0.15
DDX55-212ENST00000544738 C10orf111Q8N326 155 aa14.13□□□□□ -0.15
DDX55-212ENST00000544738 ZNF525Q8N782 197 aa14.13□□□□□ -0.15
DDX55-212ENST00000544738 OR6S1Q8NH40 331 aa14.13□□□□□ -0.15
DDX55-212ENST00000544738 MAGEE2Q8TD90 523 aaPredicted RBP14.13□□□□□ -0.15
DDX55-212ENST00000544738 TSPEARQ8WU66 669 aa14.13□□□□□ -0.15
DDX55-212ENST00000544738 BCL2L2Q92843 193 aaPredicted RBP14.13□□□□□ -0.15
DDX55-212ENST00000544738 TAAR8Q969N4 342 aa14.13□□□□□ -0.15
DDX55-212ENST00000544738 ALKBH3Q96Q83 286 aaPredicted RBP14.13□□□□□ -0.15
DDX55-212ENST00000544738 EPYCQ99645 322 aa14.13□□□□□ -0.15
DDX55-212ENST00000544738 KCNS3Q9BQ31 491 aa14.13□□□□□ -0.15
DDX55-212ENST00000544738 SIKE1Q9BRV8 207 aa14.13□□□□□ -0.15
DDX55-212ENST00000544738 RSPO3Q9BXY4 272 aaPredicted RBP14.13□□□□□ -0.15
DDX55-212ENST00000544738 ANGPT4Q9Y264 503 aa14.13□□□□□ -0.15
DDX55-212ENST00000544738 NDUFAF1Q9Y375 327 aa14.13□□□□□ -0.15
DDX55-212ENST00000544738 PMF1-BGLAPU3KQ54 211 aa14.13□□□□□ -0.15
DDX55-212ENST00000544738 HEATR1Q9H583 2144 aaKnown RBP14.12□□□□□ -0.15
DDX55-212ENST00000544738 PLCE1Q9P212 2302 aa14.12□□□□□ -0.15
DDX55-212ENST00000544738 ARPC4-TTLL3A0A0A6YYG9 625 aa14.12□□□□□ -0.15
DDX55-212ENST00000544738 LOC100289279A0A1B0GTE1 492 aa14.12□□□□□ -0.15
DDX55-212ENST00000544738 RPL36A-HNRNPH2H7BZ11 118 aa14.12□□□□□ -0.15
DDX55-212ENST00000544738 SLC43A1O75387 559 aa14.12□□□□□ -0.15
DDX55-212ENST00000544738 UPK3AO75631 287 aa14.12□□□□□ -0.15
DDX55-212ENST00000544738 LGI1O95970 557 aa14.12□□□□□ -0.15
DDX55-212ENST00000544738 USF1P22415 310 aaPredicted RBP14.12□□□□□ -0.15
DDX55-212ENST00000544738 LSM11P83369 360 aaKnown RBP eCLIP14.12□□□□□ -0.15
DDX55-212ENST00000544738 RBBP4Q09028 425 aa14.12□□□□□ -0.15
DDX55-212ENST00000544738 C3orf36Q3SXR2 165 aa14.12□□□□□ -0.15
DDX55-212ENST00000544738 SWT1Q5T5J6 900 aaKnown RBP14.12□□□□□ -0.15
DDX55-212ENST00000544738 B3GLCTQ6Y288 498 aa14.12□□□□□ -0.15
DDX55-212ENST00000544738 RANBP3LQ86VV4 465 aaPredicted RBP14.12□□□□□ -0.15
DDX55-212ENST00000544738 KDM8Q8N371 416 aa14.12□□□□□ -0.15
DDX55-212ENST00000544738 DPP10Q8N608 796 aa14.12□□□□□ -0.15
DDX55-212ENST00000544738 C11orf65Q8NCR3 313 aa14.12□□□□□ -0.15
DDX55-212ENST00000544738 ADPRHL1Q8NDY3 354 aa14.12□□□□□ -0.15
DDX55-212ENST00000544738 RNF217Q8TC41 542 aa14.12□□□□□ -0.15
DDX55-212ENST00000544738 FAM168AQ92567 244 aa14.12□□□□□ -0.15
DDX55-212ENST00000544738 CPPED1Q9BRF8 314 aaPredicted RBP14.12□□□□□ -0.15
DDX55-212ENST00000544738 IKZF5Q9H5V7 419 aa14.12□□□□□ -0.15
DDX55-212ENST00000544738 MOKQ9UQ07 419 aa14.12□□□□□ -0.15
DDX55-212ENST00000544738 CORINQ9Y5Q5 1042 aa14.12□□□□□ -0.15
DDX55-212ENST00000544738 DYSFO75923 2080 aa14.11□□□□□ -0.15
DDX55-212ENST00000544738 A0A087WUJ7 227 aa14.11□□□□□ -0.15
DDX55-212ENST00000544738 ATP6V1G2-DDX39BF2Z307 99 aa14.11□□□□□ -0.15
DDX55-212ENST00000544738 M0R082 166 aa14.11□□□□□ -0.15
DDX55-212ENST00000544738 ANGPT2O15123 496 aa14.11□□□□□ -0.15
DDX55-212ENST00000544738 TCF21O43680 179 aa14.11□□□□□ -0.15
DDX55-212ENST00000544738 ZNF432O94892 652 aa14.11□□□□□ -0.15
DDX55-212ENST00000544738 MFN2O95140 757 aa14.11□□□□□ -0.15
DDX55-212ENST00000544738 CRYAAP02489 173 aa14.11□□□□□ -0.15
DDX55-212ENST00000544738 EGR1P18146 543 aa14.11□□□□□ -0.15
DDX55-212ENST00000544738 AQP1P29972 269 aa14.11□□□□□ -0.15
DDX55-212ENST00000544738 GRPRP30550 384 aa14.11□□□□□ -0.15
DDX55-212ENST00000544738 GZMKP49863 264 aa14.11□□□□□ -0.15
DDX55-212ENST00000544738 ROR2Q01974 943 aaKnown RBP14.11□□□□□ -0.15
DDX55-212ENST00000544738 LGALS3BPQ08380 585 aa14.11□□□□□ -0.15
DDX55-212ENST00000544738 GLIPR1L2Q4G1C9 344 aa14.11□□□□□ -0.15
DDX55-212ENST00000544738 METTL21CQ5VZV1 264 aa14.11□□□□□ -0.15
DDX55-212ENST00000544738 DHDDSQ86SQ9 333 aa14.11□□□□□ -0.15
DDX55-212ENST00000544738 COMTD1Q86VU5 262 aa14.11□□□□□ -0.15
DDX55-212ENST00000544738 MEX3DQ86XN8 651 aaKnown RBP14.11□□□□□ -0.15
DDX55-212ENST00000544738 GPR137CQ8N3F9 429 aa14.11□□□□□ -0.15
DDX55-212ENST00000544738 FAM169BQ8N8A8 192 aa14.11□□□□□ -0.15
DDX55-212ENST00000544738 PIK3C3Q8NEB9 887 aa14.11□□□□□ -0.15
DDX55-212ENST00000544738 ZNF417Q8TAU3 575 aa14.11□□□□□ -0.15
DDX55-212ENST00000544738 ANKRD27Q96NW4 1050 aa14.11□□□□□ -0.15
DDX55-212ENST00000544738 SLC38A2Q96QD8 506 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms