RNA–Protein interactions for RNA: ENST00000543710.5

VPS13D-211, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 5,676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-211ENST00000543710 CCSAPQ6IQ19 270 aaPredicted RBP7.25□□□□□ -1.25
VPS13D-211ENST00000543710 MRPL21Q7Z2W9 205 aaKnown RBP7.25□□□□□ -1.25
VPS13D-211ENST00000543710 DCBLD1Q8N8Z6 715 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 IL17RDQ8NFM7 739 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 OR9K2Q8NGE7 335 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 ANGPTL6Q8NI99 470 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 WDR20Q8TBZ3 569 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 NT5C3BQ969T7 300 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 CCDC74BQ96LY2 380 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 CUTCQ9NTM9 273 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 ERVK13-1Q9NX77 482 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 PCDHGA1Q9Y5H4 931 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 RGPD4Q7Z3J3 1758 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 A0A087WZY1 265 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 EME2A4GXA9 379 aaPredicted RBP7.25□□□□□ -1.25
VPS13D-211ENST00000543710 PAPLNO95428 1278 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 CHRM2P08172 466 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 C8orf89P0DMQ9 161 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 GAAP10253 952 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 HOXA11P31270 313 aaPredicted RBP7.25□□□□□ -1.25
VPS13D-211ENST00000543710 GIPRP48546 466 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 MAP2K6P52564 334 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 SPOCK1Q08629 439 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 GLYR1Q49A26 553 aaPredicted RBP7.25□□□□□ -1.25
VPS13D-211ENST00000543710 ZNF789Q5FWF6 425 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 XKR7Q5GH72 579 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 C19orf35Q6ZS72 473 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 CPNE8Q86YQ8 564 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 PXT1Q8NFP0 134 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 OR1F2PQ96R84 312 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 HCAR1Q9BXC0 346 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 MFFQ9GZY8 342 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 PRMT8Q9NR22 394 aaPredicted RBP7.25□□□□□ -1.25
VPS13D-211ENST00000543710 NDUFB11Q9NX14 153 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 HS3ST2Q9Y278 367 aa7.25□□□□□ -1.25
VPS13D-211ENST00000543710 ECM29Q5VYK3 1845 aa7.24□□□□□ -1.25
VPS13D-211ENST00000543710 TRABD2BA6NFA1 517 aa7.24□□□□□ -1.25
VPS13D-211ENST00000543710 TBX19O60806 448 aa7.24□□□□□ -1.25
VPS13D-211ENST00000543710 CRTAPO75718 401 aaPredicted RBP7.24□□□□□ -1.25
VPS13D-211ENST00000543710 CHRM5P08912 532 aaPredicted RBP7.24□□□□□ -1.25
VPS13D-211ENST00000543710 CHRNB1P11230 501 aa7.24□□□□□ -1.25
VPS13D-211ENST00000543710 SLC6A11P48066 632 aa7.24□□□□□ -1.25
VPS13D-211ENST00000543710 CYB561P49447 251 aa7.24□□□□□ -1.25
VPS13D-211ENST00000543710 GPR85P60893 370 aa7.24□□□□□ -1.25
VPS13D-211ENST00000543710 GALEQ14376 348 aa7.24□□□□□ -1.25
VPS13D-211ENST00000543710 ZXDCQ2QGD7 858 aaPredicted RBP7.24□□□□□ -1.25
VPS13D-211ENST00000543710 B3GLCTQ6Y288 498 aa7.24□□□□□ -1.25
VPS13D-211ENST00000543710 CDHR3Q6ZTQ4 885 aa7.24□□□□□ -1.25
VPS13D-211ENST00000543710 LRRC15Q8TF66 581 aa7.24□□□□□ -1.25
VPS13D-211ENST00000543710 SARGQ9BW04 601 aa7.24□□□□□ -1.25
VPS13D-211ENST00000543710 HAPLN2Q9GZV7 340 aa7.24□□□□□ -1.25
VPS13D-211ENST00000543710 TP63Q9H3D4 680 aaPredicted RBP7.24□□□□□ -1.25
VPS13D-211ENST00000543710 HCFC1R1Q9NWW0 138 aa7.24□□□□□ -1.25
VPS13D-211ENST00000543710 SOX15O60248 233 aa7.24□□□□□ -1.25
VPS13D-211ENST00000543710 MAS1P04201 325 aa7.24□□□□□ -1.25
VPS13D-211ENST00000543710 ARL3P36405 182 aa7.24□□□□□ -1.25
VPS13D-211ENST00000543710 SUMO3P55854 103 aaPredicted RBP7.24□□□□□ -1.25
VPS13D-211ENST00000543710 FLI1Q01543 452 aaPredicted RBP7.24□□□□□ -1.25
VPS13D-211ENST00000543710 GPR18Q14330 331 aa7.24□□□□□ -1.25
VPS13D-211ENST00000543710 ARHGAP11BQ3KRB8 267 aa7.24□□□□□ -1.25
VPS13D-211ENST00000543710 PODNL1Q6PEZ8 512 aa7.24□□□□□ -1.25
VPS13D-211ENST00000543710 NANOGP1Q8N7R0 232 aa7.24□□□□□ -1.25
VPS13D-211ENST00000543710 GTF2H4Q92759 462 aa7.24□□□□□ -1.25
VPS13D-211ENST00000543710 INTS12Q96CB8 462 aaKnown RBP7.24□□□□□ -1.25
VPS13D-211ENST00000543710 OR52D1Q9H346 318 aa7.24□□□□□ -1.25
VPS13D-211ENST00000543710 ELOVL3Q9HB03 270 aa7.24□□□□□ -1.25
VPS13D-211ENST00000543710 BARX1Q9HBU1 254 aaPredicted RBP7.24□□□□□ -1.25
VPS13D-211ENST00000543710 PLEKHJ1Q9NW61 149 aa7.24□□□□□ -1.25
VPS13D-211ENST00000543710 A6NLC8 198 aa7.24□□□□□ -1.25
VPS13D-211ENST00000543710 FZD7O75084 574 aa7.24□□□□□ -1.25
VPS13D-211ENST00000543710 SLCO2B1O94956 709 aa7.24□□□□□ -1.25
VPS13D-211ENST00000543710 ADH7P40394 386 aa7.24□□□□□ -1.25
VPS13D-211ENST00000543710 UBE2MP61081 183 aaKnown RBP7.24□□□□□ -1.25
VPS13D-211ENST00000543710 RANP62826 216 aaKnown RBP7.24□□□□□ -1.25
VPS13D-211ENST00000543710 BAK1Q16611 211 aa7.24□□□□□ -1.25
VPS13D-211ENST00000543710 PAGE3Q5JUK9 113 aa7.24□□□□□ -1.25
VPS13D-211ENST00000543710 AGBL4Q5VU57 503 aa7.24□□□□□ -1.25
VPS13D-211ENST00000543710 LHFPL2Q6ZUX7 228 aa7.24□□□□□ -1.25
VPS13D-211ENST00000543710 SMIM15Q7Z3B0 74 aa7.24□□□□□ -1.25
VPS13D-211ENST00000543710 NPWQ8N729 165 aa7.24□□□□□ -1.25
VPS13D-211ENST00000543710 OR6M1Q8NGM8 313 aa7.24□□□□□ -1.25
VPS13D-211ENST00000543710 MZB1Q8WU39 189 aa7.24□□□□□ -1.25
VPS13D-211ENST00000543710 RAB8BQ92930 207 aa7.24□□□□□ -1.25
VPS13D-211ENST00000543710 OR11A1Q9GZK7 315 aa7.24□□□□□ -1.25
VPS13D-211ENST00000543710 THAP10Q9P2Z0 257 aaPredicted RBP7.24□□□□□ -1.25
VPS13D-211ENST00000543710 TRAPPC4Q9Y296 219 aa7.24□□□□□ -1.25
VPS13D-211ENST00000543710 PCYT1BQ9Y5K3 369 aaPredicted RBP7.24□□□□□ -1.25
VPS13D-211ENST00000543710 PRSS38A1L453 326 aa7.24□□□□□ -1.25
VPS13D-211ENST00000543710 ACOD1A6NK06 481 aa7.24□□□□□ -1.25
VPS13D-211ENST00000543710 LRRC30A6NM36 301 aa7.24□□□□□ -1.25
VPS13D-211ENST00000543710 ZNF705EA8MWA4 302 aaPredicted RBP7.24□□□□□ -1.25
VPS13D-211ENST00000543710 TNFRSF10CO14798 259 aa7.24□□□□□ -1.25
VPS13D-211ENST00000543710 LINC01565O15544 149 aa7.24□□□□□ -1.25
VPS13D-211ENST00000543710 C1QBP02746 253 aa7.24□□□□□ -1.25
VPS13D-211ENST00000543710 TIMP2P16035 220 aa7.24□□□□□ -1.25
VPS13D-211ENST00000543710 PRDX3P30048 256 aaKnown RBP7.24□□□□□ -1.25
VPS13D-211ENST00000543710 PNLIPRP3Q17RR3 467 aa7.24□□□□□ -1.25
VPS13D-211ENST00000543710 ZNF684Q5T5D7 378 aa7.24□□□□□ -1.25
VPS13D-211ENST00000543710 AVPI1Q5T686 147 aa7.24□□□□□ -1.25
VPS13D-211ENST00000543710 KMT5CQ86Y97 462 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms