RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 PIP5K1CO60331 668 aa17.21■□□□□ 0.35
DDX55-207ENST00000540763 OR6A2O95222 327 aa17.21■□□□□ 0.35
DDX55-207ENST00000540763 FUT1P19526 365 aa17.21■□□□□ 0.35
DDX55-207ENST00000540763 HMGA2P52926 109 aa17.21■□□□□ 0.35
DDX55-207ENST00000540763 ZNF787Q6DD87 383 aa17.21■□□□□ 0.35
DDX55-207ENST00000540763 CASP12Q6UXS9 341 aa17.21■□□□□ 0.35
DDX55-207ENST00000540763 Q6ZT83 130 aa17.21■□□□□ 0.35
DDX55-207ENST00000540763 TMPRSS11FQ6ZWK6 438 aa17.21■□□□□ 0.35
DDX55-207ENST00000540763 SPATA24Q86W54 205 aa17.21■□□□□ 0.35
DDX55-207ENST00000540763 EPHX4Q8IUS5 362 aa17.21■□□□□ 0.35
DDX55-207ENST00000540763 UEVLDQ8IX04 471 aa17.21■□□□□ 0.35
DDX55-207ENST00000540763 DMRTC2Q8IXT2 367 aaPredicted RBP17.21■□□□□ 0.35
DDX55-207ENST00000540763 ZNF100Q8IYN0 542 aa17.21■□□□□ 0.35
DDX55-207ENST00000540763 CANT1Q8WVQ1 401 aa17.21■□□□□ 0.35
DDX55-207ENST00000540763 OR10A4Q9H209 315 aa17.21■□□□□ 0.35
DDX55-207ENST00000540763 YY1AP1Q9H869 796 aa17.21■□□□□ 0.35
DDX55-207ENST00000540763 MALT1Q9UDY8 824 aa17.21■□□□□ 0.35
DDX55-207ENST00000540763 TRBV4-1A0A0J9YWV2 114 aa17.2■□□□□ 0.34
DDX55-207ENST00000540763 SH3PXD2BA1X283 911 aa17.2■□□□□ 0.34
DDX55-207ENST00000540763 ADORA3P0DMS8 318 aa17.2■□□□□ 0.34
DDX55-207ENST00000540763 POU2F1P14859 743 aa17.2■□□□□ 0.34
DDX55-207ENST00000540763 COL8A1P27658 744 aa17.2■□□□□ 0.34
DDX55-207ENST00000540763 UQCRC1P31930 480 aa17.2■□□□□ 0.34
DDX55-207ENST00000540763 NTF4P34130 210 aa17.2■□□□□ 0.34
DDX55-207ENST00000540763 LIMS1P48059 325 aa17.2■□□□□ 0.34
DDX55-207ENST00000540763 RPS4XP62701 263 aaKnown RBP17.2■□□□□ 0.34
DDX55-207ENST00000540763 C1DQ13901 141 aaKnown RBP17.2■□□□□ 0.34
DDX55-207ENST00000540763 P2RY6Q15077 328 aa17.2■□□□□ 0.34
DDX55-207ENST00000540763 GABRG1Q8N1C3 465 aa17.2■□□□□ 0.34
DDX55-207ENST00000540763 LINC00471Q8N535 108 aa17.2■□□□□ 0.34
DDX55-207ENST00000540763 LRRC17Q8N6Y2 441 aa17.2■□□□□ 0.34
DDX55-207ENST00000540763 PAPD5Q8NDF8 572 aaKnown RBP17.2■□□□□ 0.34
DDX55-207ENST00000540763 ANKK1Q8NFD2 765 aa17.2■□□□□ 0.34
DDX55-207ENST00000540763 OR4K5Q8NGD3 323 aa17.2■□□□□ 0.34
DDX55-207ENST00000540763 ZNF385AQ96PM9 386 aaKnown RBP17.2■□□□□ 0.34
DDX55-207ENST00000540763 TAS2R5Q9NYW4 299 aa17.2■□□□□ 0.34
DDX55-207ENST00000540763 AURKCQ9UQB9 309 aa17.2■□□□□ 0.34
DDX55-207ENST00000540763 HIF3AQ9Y2N7 669 aa17.2■□□□□ 0.34
DDX55-207ENST00000540763 LYVE1Q9Y5Y7 322 aa17.2■□□□□ 0.34
DDX55-207ENST00000540763 NPIPB13A6NJU9 1138 aa17.19■□□□□ 0.34
DDX55-207ENST00000540763 NPIPB4C9JG80 1138 aa17.19■□□□□ 0.34
DDX55-207ENST00000540763 CIB2O75838 187 aa17.19■□□□□ 0.34
DDX55-207ENST00000540763 HPRP00739 348 aa17.19■□□□□ 0.34
DDX55-207ENST00000540763 PSMB1P20618 241 aaKnown RBP17.19■□□□□ 0.34
DDX55-207ENST00000540763 C1orf146Q5VVC0 180 aa17.19■□□□□ 0.34
DDX55-207ENST00000540763 FBXW9Q5XUX1 488 aa17.19■□□□□ 0.34
DDX55-207ENST00000540763 SP5Q6BEB4 398 aaPredicted RBP17.19■□□□□ 0.34
DDX55-207ENST00000540763 OR2T5Q6IEZ7 315 aa17.19■□□□□ 0.34
DDX55-207ENST00000540763 NHLRC1Q6VVB1 395 aa17.19■□□□□ 0.34
DDX55-207ENST00000540763 AAED1Q7RTV5 226 aa17.19■□□□□ 0.34
DDX55-207ENST00000540763 KDM8Q8N371 416 aa17.19■□□□□ 0.34
DDX55-207ENST00000540763 POMGNT2Q8NAT1 580 aa17.19■□□□□ 0.34
DDX55-207ENST00000540763 OR2T29Q8NH02 315 aa17.19■□□□□ 0.34
DDX55-207ENST00000540763 UTP4Q969X6 686 aaKnown RBP17.19■□□□□ 0.34
DDX55-207ENST00000540763 ZNF775Q96BV0 537 aaPredicted RBP17.19■□□□□ 0.34
DDX55-207ENST00000540763 ALPK1Q96QP1 1244 aa17.19■□□□□ 0.34
DDX55-207ENST00000540763 USB1Q9BQ65 265 aaKnown RBP17.19■□□□□ 0.34
DDX55-207ENST00000540763 CHID1Q9BWS9 393 aa17.19■□□□□ 0.34
DDX55-207ENST00000540763 SLCO5A1Q9H2Y9 848 aa17.19■□□□□ 0.34
DDX55-207ENST00000540763 CCM2LQ9NUG4 571 aaPredicted RBP17.19■□□□□ 0.34
DDX55-207ENST00000540763 TMCC3Q9ULS5 477 aa17.19■□□□□ 0.34
DDX55-207ENST00000540763 EFCAB9A8MZ26 197 aa17.18■□□□□ 0.34
DDX55-207ENST00000540763 ZNF432O94892 652 aa17.18■□□□□ 0.34
DDX55-207ENST00000540763 SAGP10523 405 aaPredicted RBP17.18■□□□□ 0.34
DDX55-207ENST00000540763 COX5AP20674 150 aa17.18■□□□□ 0.34
DDX55-207ENST00000540763 AHCYP23526 432 aa17.18■□□□□ 0.34
DDX55-207ENST00000540763 UGT2B10P36537 528 aa17.18■□□□□ 0.34
DDX55-207ENST00000540763 IFNGR2P38484 337 aa17.18■□□□□ 0.34
DDX55-207ENST00000540763 OMPP47874 163 aa17.18■□□□□ 0.34
DDX55-207ENST00000540763 CLDN17P56750 224 aa17.18■□□□□ 0.34
DDX55-207ENST00000540763 LSM11P83369 360 aaKnown RBP eCLIP17.18■□□□□ 0.34
DDX55-207ENST00000540763 IL1RL1Q01638 556 aa17.18■□□□□ 0.34
DDX55-207ENST00000540763 POU3F1Q03052 451 aaPredicted RBP17.18■□□□□ 0.34
DDX55-207ENST00000540763 FOXD4Q12950 439 aaPredicted RBP17.18■□□□□ 0.34
DDX55-207ENST00000540763 SEC23BQ15437 767 aa17.18■□□□□ 0.34
DDX55-207ENST00000540763 TBPL2Q6SJ96 375 aa17.18■□□□□ 0.34
DDX55-207ENST00000540763 ABHD12BQ7Z5M8 362 aaPredicted RBP17.18■□□□□ 0.34
DDX55-207ENST00000540763 OR52J3Q8NH60 311 aa17.18■□□□□ 0.34
DDX55-207ENST00000540763 RSRC1Q96IZ7 334 aaKnown RBP17.18■□□□□ 0.34
DDX55-207ENST00000540763 HDHD5Q9BXW7 423 aa17.18■□□□□ 0.34
DDX55-207ENST00000540763 LINC00470Q9BZP3 86 aa17.18■□□□□ 0.34
DDX55-207ENST00000540763 PRSS50Q9UI38 385 aa17.18■□□□□ 0.34
DDX55-207ENST00000540763 GPR52Q9Y2T5 361 aa17.18■□□□□ 0.34
DDX55-207ENST00000540763 C16orf97H3BN30 126 aa17.17■□□□□ 0.34
DDX55-207ENST00000540763 BLOC1S5-TXNDC5H3BN57 136 aa17.17■□□□□ 0.34
DDX55-207ENST00000540763 TNFRSF11BO00300 401 aa17.17■□□□□ 0.34
DDX55-207ENST00000540763 COX6B1P14854 86 aa17.17■□□□□ 0.34
DDX55-207ENST00000540763 PPP3CBP16298 524 aa17.17■□□□□ 0.34
DDX55-207ENST00000540763 MAKP20794 623 aa17.17■□□□□ 0.34
DDX55-207ENST00000540763 EDNRAP25101 427 aa17.17■□□□□ 0.34
DDX55-207ENST00000540763 PRPS1P60891 318 aa17.17■□□□□ 0.34
DDX55-207ENST00000540763 RPL18Q07020 188 aaKnown RBP17.17■□□□□ 0.34
DDX55-207ENST00000540763 FAM27E3Q08E93 113 aa17.17■□□□□ 0.34
DDX55-207ENST00000540763 EXOC3L2Q2M3D2 409 aa17.17■□□□□ 0.34
DDX55-207ENST00000540763 NIPAL3Q6P499 406 aa17.17■□□□□ 0.34
DDX55-207ENST00000540763 STAC2Q6ZMT1 411 aa17.17■□□□□ 0.34
DDX55-207ENST00000540763 MEX3BQ6ZN04 569 aaKnown RBP17.17■□□□□ 0.34
DDX55-207ENST00000540763 HDDC2Q7Z4H3 204 aa17.17■□□□□ 0.34
DDX55-207ENST00000540763 OAFQ86UD1 273 aa17.17■□□□□ 0.34
DDX55-207ENST00000540763 OR4C15Q8NGM1 316 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms