RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 ASB6Q9NWX5 421 aa20.04■□□□□ 0.8
SFSWAP-204ENST00000535399 RCE1Q9Y256 329 aa20.04■□□□□ 0.8
SFSWAP-204ENST00000535399 NAV2Q8IVL1 2488 aa20.04■□□□□ 0.8
SFSWAP-204ENST00000535399 hCG_2039718K7EN88 272 aa20.03■□□□□ 0.8
SFSWAP-204ENST00000535399 SIAH2O43255 324 aa20.03■□□□□ 0.8
SFSWAP-204ENST00000535399 PIP5K1CO60331 668 aa20.03■□□□□ 0.8
SFSWAP-204ENST00000535399 GOSR1O95249 250 aa20.03■□□□□ 0.8
SFSWAP-204ENST00000535399 ITGA5P08648 1049 aa20.03■□□□□ 0.8
SFSWAP-204ENST00000535399 RHCEP18577 417 aa20.03■□□□□ 0.8
SFSWAP-204ENST00000535399 MS4A2Q01362 244 aa20.03■□□□□ 0.8
SFSWAP-204ENST00000535399 ZP4Q12836 540 aa20.03■□□□□ 0.8
SFSWAP-204ENST00000535399 CYP2R1Q6VVX0 501 aa20.03■□□□□ 0.8
SFSWAP-204ENST00000535399 PXKQ7Z7A4 578 aa20.03■□□□□ 0.8
SFSWAP-204ENST00000535399 POMGNT2Q8NAT1 580 aa20.03■□□□□ 0.8
SFSWAP-204ENST00000535399 LIPHQ8WWY8 451 aa20.03■□□□□ 0.8
SFSWAP-204ENST00000535399 THTPAQ9BU02 230 aa20.03■□□□□ 0.8
SFSWAP-204ENST00000535399 MUC13Q9H3R2 512 aa20.03■□□□□ 0.8
SFSWAP-204ENST00000535399 NMNAT1Q9HAN9 279 aaPredicted RBP20.03■□□□□ 0.8
SFSWAP-204ENST00000535399 ZNF226Q9NYT6 803 aa20.03■□□□□ 0.8
SFSWAP-204ENST00000535399 TAS2R5Q9NYW4 299 aa20.03■□□□□ 0.8
SFSWAP-204ENST00000535399 UPB1Q9UBR1 384 aa20.03■□□□□ 0.8
SFSWAP-204ENST00000535399 NOX1Q9Y5S8 564 aa20.03■□□□□ 0.8
SFSWAP-204ENST00000535399 DEFB108AA8MXU0 73 aa20.02■□□□□ 0.8
SFSWAP-204ENST00000535399 ADORA3P0DMS8 318 aa20.02■□□□□ 0.8
SFSWAP-204ENST00000535399 FUT1P19526 365 aa20.02■□□□□ 0.8
SFSWAP-204ENST00000535399 LGALS3BPQ08380 585 aa20.02■□□□□ 0.8
SFSWAP-204ENST00000535399 BNIP1Q12981 228 aa20.02■□□□□ 0.8
SFSWAP-204ENST00000535399 TRIM25Q14258 630 aaKnown RBP20.02■□□□□ 0.8
SFSWAP-204ENST00000535399 LCN8Q6JVE9 175 aa20.02■□□□□ 0.8
SFSWAP-204ENST00000535399 TMEM200AQ86VY9 491 aa20.02■□□□□ 0.8
SFSWAP-204ENST00000535399 ACOT11Q8WXI4 607 aaPredicted RBP20.02■□□□□ 0.8
SFSWAP-204ENST00000535399 DHRS1Q96LJ7 313 aa20.02■□□□□ 0.8
SFSWAP-204ENST00000535399 LURAP1Q96LR2 239 aa20.02■□□□□ 0.8
SFSWAP-204ENST00000535399 USB1Q9BQ65 265 aaKnown RBP20.02■□□□□ 0.8
SFSWAP-204ENST00000535399 ANKRD19PQ9H560 264 aa20.02■□□□□ 0.8
SFSWAP-204ENST00000535399 TAS2R16Q9NYV7 291 aa20.02■□□□□ 0.8
SFSWAP-204ENST00000535399 FAM32AQ9Y421 112 aaKnown RBP20.02■□□□□ 0.8
SFSWAP-204ENST00000535399 ABCA4P78363 2273 aa20.02■□□□□ 0.8
SFSWAP-204ENST00000535399 A0A087WUU8 490 aa20.01■□□□□ 0.79
SFSWAP-204ENST00000535399 C11orf98E9PRG8 122 aa20.01■□□□□ 0.79
SFSWAP-204ENST00000535399 DIRAS1O95057 198 aa20.01■□□□□ 0.79
SFSWAP-204ENST00000535399 OR6A2O95222 327 aa20.01■□□□□ 0.79
SFSWAP-204ENST00000535399 HRGP04196 525 aa20.01■□□□□ 0.79
SFSWAP-204ENST00000535399 HIST1H2ABP04908 130 aa20.01■□□□□ 0.79
SFSWAP-204ENST00000535399 UMPSP11172 480 aa20.01■□□□□ 0.79
SFSWAP-204ENST00000535399 AHCYP23526 432 aa20.01■□□□□ 0.79
SFSWAP-204ENST00000535399 DNAJA1P31689 397 aaKnown RBP20.01■□□□□ 0.79
SFSWAP-204ENST00000535399 POU3F1Q03052 451 aaPredicted RBP20.01■□□□□ 0.79
SFSWAP-204ENST00000535399 HIST3H2AQ7L7L0 130 aa20.01■□□□□ 0.79
SFSWAP-204ENST00000535399 NRMQ8IXM6 262 aa20.01■□□□□ 0.79
SFSWAP-204ENST00000535399 HIST1H2ACQ93077 130 aa20.01■□□□□ 0.79
SFSWAP-204ENST00000535399 TXNDC15Q96J42 360 aa20.01■□□□□ 0.79
SFSWAP-204ENST00000535399 OR2M2Q96R28 347 aa20.01■□□□□ 0.79
SFSWAP-204ENST00000535399 PIP5K1AQ99755 562 aa20.01■□□□□ 0.79
SFSWAP-204ENST00000535399 LINC00470Q9BZP3 86 aa20.01■□□□□ 0.79
SFSWAP-204ENST00000535399 A0A1W2PRQ8 180 aa20■□□□□ 0.79
SFSWAP-204ENST00000535399 TCRBV5S2A0A599 114 aa20■□□□□ 0.79
SFSWAP-204ENST00000535399 HTR3EA5X5Y0 456 aa20■□□□□ 0.79
SFSWAP-204ENST00000535399 OR6C65A6NJZ3 312 aa20■□□□□ 0.79
SFSWAP-204ENST00000535399 GYG2O15488 501 aa20■□□□□ 0.79
SFSWAP-204ENST00000535399 UPK3AO75631 287 aa20■□□□□ 0.79
SFSWAP-204ENST00000535399 H1F0P07305 194 aaKnown RBP20■□□□□ 0.79
SFSWAP-204ENST00000535399 IFI30P13284 250 aa20■□□□□ 0.79
SFSWAP-204ENST00000535399 MPGP29372 298 aa20■□□□□ 0.79
SFSWAP-204ENST00000535399 DGCR6Q14129 220 aa20■□□□□ 0.79
SFSWAP-204ENST00000535399 TAB1Q15750 504 aa20■□□□□ 0.79
SFSWAP-204ENST00000535399 DNAL1Q4LDG9 190 aa20■□□□□ 0.79
SFSWAP-204ENST00000535399 MTX3Q5HYI7 312 aa20■□□□□ 0.79
SFSWAP-204ENST00000535399 TBPL2Q6SJ96 375 aa20■□□□□ 0.79
SFSWAP-204ENST00000535399 LINGO2Q7L985 606 aa20■□□□□ 0.79
SFSWAP-204ENST00000535399 NANOGNBQ7Z5D8 188 aa20■□□□□ 0.79
SFSWAP-204ENST00000535399 DHFR2Q86XF0 187 aa20■□□□□ 0.79
SFSWAP-204ENST00000535399 WDFY1Q8IWB7 410 aa20■□□□□ 0.79
SFSWAP-204ENST00000535399 RNF113BQ8IZP6 322 aaKnown RBP20■□□□□ 0.79
SFSWAP-204ENST00000535399 TMEM123Q8N131 208 aa20■□□□□ 0.79
SFSWAP-204ENST00000535399 SLC7A13Q8TCU3 470 aa20■□□□□ 0.79
SFSWAP-204ENST00000535399 HSD17B8Q92506 261 aa20■□□□□ 0.79
SFSWAP-204ENST00000535399 CCDC124Q96CT7 223 aaKnown RBP20■□□□□ 0.79
SFSWAP-204ENST00000535399 BPIFA2Q96DR5 249 aa20■□□□□ 0.79
SFSWAP-204ENST00000535399 CLEC4MQ9H2X3 399 aaPredicted RBP20■□□□□ 0.79
SFSWAP-204ENST00000535399 IL1RAPQ9NPH3 570 aa20■□□□□ 0.79
SFSWAP-204ENST00000535399 MED29Q9NX70 200 aa20■□□□□ 0.79
SFSWAP-204ENST00000535399 POLQO75417 2590 aa19.99■□□□□ 0.79
SFSWAP-204ENST00000535399 TACC2O95359 2948 aa19.99■□□□□ 0.79
SFSWAP-204ENST00000535399 CIB4A0PJX0 185 aa19.99■□□□□ 0.79
SFSWAP-204ENST00000535399 ACOT8O14734 319 aa19.99■□□□□ 0.79
SFSWAP-204ENST00000535399 KLF4O43474 513 aa19.99■□□□□ 0.79
SFSWAP-204ENST00000535399 AKAP8O43823 692 aaKnown RBP19.99■□□□□ 0.79
SFSWAP-204ENST00000535399 SLC43A1O75387 559 aa19.99■□□□□ 0.79
SFSWAP-204ENST00000535399 RAD51DO75771 328 aa19.99■□□□□ 0.79
SFSWAP-204ENST00000535399 TSPAN19P0C672 248 aa19.99■□□□□ 0.79
SFSWAP-204ENST00000535399 ITGA2P17301 1181 aa19.99■□□□□ 0.79
SFSWAP-204ENST00000535399 MAKP20794 623 aa19.99■□□□□ 0.79
SFSWAP-204ENST00000535399 PRKCDQ05655 676 aa19.99■□□□□ 0.79
SFSWAP-204ENST00000535399 C9orf135Q5VTT2 229 aa19.99■□□□□ 0.79
SFSWAP-204ENST00000535399 PGM2L1Q6PCE3 622 aa19.99■□□□□ 0.79
SFSWAP-204ENST00000535399 PODNL1Q6PEZ8 512 aa19.99■□□□□ 0.79
SFSWAP-204ENST00000535399 ZNF730Q6ZMV8 503 aa19.99■□□□□ 0.79
SFSWAP-204ENST00000535399 MBOAT2Q6ZWT7 520 aa19.99■□□□□ 0.79
SFSWAP-204ENST00000535399 MEX3DQ86XN8 651 aaKnown RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms