RNA–Protein interactions for RNA: ENST00000520170.1

HDAC2-207, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-207ENST00000520170 HNRNPCL2B2RXH8 293 aa17.3■□□□□ 0.36
HDAC2-207ENST00000520170 HNRNPCL3B7ZW38 293 aa17.3■□□□□ 0.36
HDAC2-207ENST00000520170 HNRNPCL1O60812 293 aaKnown RBP17.3■□□□□ 0.36
HDAC2-207ENST00000520170 SEC14L2O76054 403 aa17.3■□□□□ 0.36
HDAC2-207ENST00000520170 IGFBP1P08833 259 aaPredicted RBP17.3■□□□□ 0.36
HDAC2-207ENST00000520170 HNRNPCL4P0DMR1 293 aa17.3■□□□□ 0.36
HDAC2-207ENST00000520170 ITGA2P17301 1181 aa17.3■□□□□ 0.36
HDAC2-207ENST00000520170 ARR3P36575 388 aa17.3■□□□□ 0.36
HDAC2-207ENST00000520170 SNTB2Q13425 540 aaKnown RBP17.3■□□□□ 0.36
HDAC2-207ENST00000520170 CCNIQ14094 377 aa17.3■□□□□ 0.36
HDAC2-207ENST00000520170 DAG1Q14118 895 aa17.3■□□□□ 0.36
HDAC2-207ENST00000520170 GTDC1Q4AE62 458 aa17.3■□□□□ 0.36
HDAC2-207ENST00000520170 ZNF311Q5JNZ3 666 aa17.3■□□□□ 0.36
HDAC2-207ENST00000520170 NXNQ6DKJ4 435 aa17.3■□□□□ 0.36
HDAC2-207ENST00000520170 KRT80Q6KB66 452 aa17.3■□□□□ 0.36
HDAC2-207ENST00000520170 ANKK1Q8NFD2 765 aa17.3■□□□□ 0.36
HDAC2-207ENST00000520170 TPK1Q9H3S4 243 aa17.3■□□□□ 0.36
HDAC2-207ENST00000520170 B3GAT1Q9P2W7 334 aa17.3■□□□□ 0.36
HDAC2-207ENST00000520170 IFT52Q9Y366 437 aa17.3■□□□□ 0.36
HDAC2-207ENST00000520170 DYSFO75923 2080 aa17.3■□□□□ 0.36
HDAC2-207ENST00000520170 SLC22A3O75751 556 aa17.29■□□□□ 0.36
HDAC2-207ENST00000520170 KITP10721 976 aa17.29■□□□□ 0.36
HDAC2-207ENST00000520170 CBLP22681 906 aa17.29■□□□□ 0.36
HDAC2-207ENST00000520170 CDH15P55291 814 aa17.29■□□□□ 0.36
HDAC2-207ENST00000520170 RIN1Q13671 783 aa17.29■□□□□ 0.36
HDAC2-207ENST00000520170 RINLQ6ZS11 566 aa17.29■□□□□ 0.36
HDAC2-207ENST00000520170 IL17RDQ8NFM7 739 aa17.29■□□□□ 0.36
HDAC2-207ENST00000520170 TAAR8Q969N4 342 aa17.29■□□□□ 0.36
HDAC2-207ENST00000520170 NOX3Q9HBY0 568 aa17.29■□□□□ 0.36
HDAC2-207ENST00000520170 RPS6KB2Q9UBS0 482 aa17.29■□□□□ 0.36
HDAC2-207ENST00000520170 CMAHPQ9Y471 501 aa17.29■□□□□ 0.36
HDAC2-207ENST00000520170 TRPC5OSA6NMA1 111 aa17.28■□□□□ 0.36
HDAC2-207ENST00000520170 M0R082 166 aa17.28■□□□□ 0.36
HDAC2-207ENST00000520170 M0R3G1 203 aa17.28■□□□□ 0.36
HDAC2-207ENST00000520170 AIM2O14862 343 aa17.28■□□□□ 0.36
HDAC2-207ENST00000520170 HDAC3O15379 428 aa17.28■□□□□ 0.36
HDAC2-207ENST00000520170 ZCCHC18P0CG32 403 aa17.28■□□□□ 0.36
HDAC2-207ENST00000520170 PDCD4Q53EL6 469 aaKnown RBP17.28■□□□□ 0.36
HDAC2-207ENST00000520170 HHATQ5VTY9 493 aa17.28■□□□□ 0.36
HDAC2-207ENST00000520170 CARD17Q5XLA6 110 aa17.28■□□□□ 0.36
HDAC2-207ENST00000520170 PIK3C3Q8NEB9 887 aa17.28■□□□□ 0.36
HDAC2-207ENST00000520170 ZNF417Q8TAU3 575 aa17.28■□□□□ 0.36
HDAC2-207ENST00000520170 VPS33AQ96AX1 596 aa17.28■□□□□ 0.36
HDAC2-207ENST00000520170 TRIM44Q96DX7 344 aaPredicted RBP17.28■□□□□ 0.36
HDAC2-207ENST00000520170 ITCHQ96J02 903 aa17.28■□□□□ 0.36
HDAC2-207ENST00000520170 OR2M2Q96R28 347 aa17.28■□□□□ 0.36
HDAC2-207ENST00000520170 ZNF587Q96SQ5 575 aaPredicted RBP17.28■□□□□ 0.36
HDAC2-207ENST00000520170 RMND5AQ9H871 391 aa17.28■□□□□ 0.36
HDAC2-207ENST00000520170 THUMPD1Q9NXG2 353 aaKnown RBP17.28■□□□□ 0.36
HDAC2-207ENST00000520170 USP22Q9UPT9 525 aa17.28■□□□□ 0.36
HDAC2-207ENST00000520170 ZNF99A8MXY4 864 aaPredicted RBP17.27■□□□□ 0.36
HDAC2-207ENST00000520170 NUDT7P0C024 238 aa17.27■□□□□ 0.36
HDAC2-207ENST00000520170 IDO1P14902 403 aa17.27■□□□□ 0.36
HDAC2-207ENST00000520170 GRPRP30550 384 aa17.27■□□□□ 0.36
HDAC2-207ENST00000520170 PHYHD1Q5SRE7 291 aa17.27■□□□□ 0.36
HDAC2-207ENST00000520170 C6orf10Q5SRN2 563 aa17.27■□□□□ 0.36
HDAC2-207ENST00000520170 UGT2A3Q6UWM9 527 aa17.27■□□□□ 0.36
HDAC2-207ENST00000520170 CCDC36Q8IYA8 594 aa17.27■□□□□ 0.36
HDAC2-207ENST00000520170 ANKRD42Q8N9B4 389 aa17.27■□□□□ 0.36
HDAC2-207ENST00000520170 MAL2Q969L2 176 aa17.27■□□□□ 0.36
HDAC2-207ENST00000520170 OCEL1Q9H607 264 aa17.27■□□□□ 0.36
HDAC2-207ENST00000520170 AKAP8O43823 692 aaKnown RBP17.26■□□□□ 0.35
HDAC2-207ENST00000520170 OR2T1O43869 369 aa17.26■□□□□ 0.35
HDAC2-207ENST00000520170 HLA-HP01893 362 aa17.26■□□□□ 0.35
HDAC2-207ENST00000520170 CD79AP11912 226 aa17.26■□□□□ 0.35
HDAC2-207ENST00000520170 NR4A1P22736 598 aa17.26■□□□□ 0.35
HDAC2-207ENST00000520170 DVL1P1P54792 670 aaPredicted RBP17.26■□□□□ 0.35
HDAC2-207ENST00000520170 PIGFQ07326 219 aa17.26■□□□□ 0.35
HDAC2-207ENST00000520170 FAM69AQ5T7M9 428 aa17.26■□□□□ 0.35
HDAC2-207ENST00000520170 H1FNTQ75WM6 255 aaPredicted RBP17.26■□□□□ 0.35
HDAC2-207ENST00000520170 TMEM123Q8N131 208 aa17.26■□□□□ 0.35
HDAC2-207ENST00000520170 MREGQ8N565 214 aa17.26■□□□□ 0.35
HDAC2-207ENST00000520170 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.26■□□□□ 0.35
HDAC2-207ENST00000520170 SLC38A4Q969I6 547 aa17.26■□□□□ 0.35
HDAC2-207ENST00000520170 MS4A3Q96HJ5 214 aa17.26■□□□□ 0.35
HDAC2-207ENST00000520170 MRPL37Q9BZE1 423 aaKnown RBP17.26■□□□□ 0.35
HDAC2-207ENST00000520170 REV1Q9UBZ9 1251 aa17.26■□□□□ 0.35
HDAC2-207ENST00000520170 METRNQ9UJH8 293 aa17.26■□□□□ 0.35
HDAC2-207ENST00000520170 TRAF3IP2O43734 574 aaPredicted RBP17.25■□□□□ 0.35
HDAC2-207ENST00000520170 SYNGR3O43761 229 aa17.25■□□□□ 0.35
HDAC2-207ENST00000520170 NQO1P15559 274 aaKnown RBP17.25■□□□□ 0.35
HDAC2-207ENST00000520170 TCN1P20061 433 aaPredicted RBP17.25■□□□□ 0.35
HDAC2-207ENST00000520170 RGNQ15493 299 aa17.25■□□□□ 0.35
HDAC2-207ENST00000520170 MSMPQ1L6U9 139 aa17.25■□□□□ 0.35
HDAC2-207ENST00000520170 WDR93Q6P2C0 686 aa17.25■□□□□ 0.35
HDAC2-207ENST00000520170 C6orf89Q6UWU4 347 aa17.25■□□□□ 0.35
HDAC2-207ENST00000520170 C12orf54Q6X4T0 127 aa17.25■□□□□ 0.35
HDAC2-207ENST00000520170 MEX3DQ86XN8 651 aaKnown RBP17.25■□□□□ 0.35
HDAC2-207ENST00000520170 UEVLDQ8IX04 471 aa17.25■□□□□ 0.35
HDAC2-207ENST00000520170 SLC35B4Q969S0 331 aa17.25■□□□□ 0.35
HDAC2-207ENST00000520170 MRPL24Q96A35 216 aaKnown RBP17.25■□□□□ 0.35
HDAC2-207ENST00000520170 EMC6Q9BV81 110 aa17.25■□□□□ 0.35
HDAC2-207ENST00000520170 NARFLQ9H6Q4 476 aa17.25■□□□□ 0.35
HDAC2-207ENST00000520170 THAP1Q9NVV9 213 aa17.25■□□□□ 0.35
HDAC2-207ENST00000520170 B3GNT2Q9NY97 397 aa17.25■□□□□ 0.35
HDAC2-207ENST00000520170 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.25■□□□□ 0.35
HDAC2-207ENST00000520170 NOX1Q9Y5S8 564 aa17.25■□□□□ 0.35
HDAC2-207ENST00000520170 V9GYY5 206 aaPredicted RBP17.25■□□□□ 0.35
HDAC2-207ENST00000520170 TRAV36DV7A0A075B6V5 113 aa17.24■□□□□ 0.35
HDAC2-207ENST00000520170 LOC102725191A0A1B0GVB3 256 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms