RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 GORASP2Q9H8Y8 452 aa3.94□□□□□ -1.78
HMGB1P23-201ENST00000518743 RNF14Q9UBS8 474 aa3.94□□□□□ -1.78
HMGB1P23-201ENST00000518743 B9D1Q9UPM9 204 aa3.94□□□□□ -1.78
HMGB1P23-201ENST00000518743 PPP1R3CQ9UQK1 317 aa3.94□□□□□ -1.78
HMGB1P23-201ENST00000518743 AP4B1Q9Y6B7 739 aa3.94□□□□□ -1.78
HMGB1P23-201ENST00000518743 PCM1Q15154 2024 aa3.94□□□□□ -1.78
HMGB1P23-201ENST00000518743 HEATR5AQ86XA9 2040 aa3.94□□□□□ -1.78
HMGB1P23-201ENST00000518743 PPIAL4CA0A0B4J2A2 164 aa3.93□□□□□ -1.78
HMGB1P23-201ENST00000518743 LOC390937A0A1W2PQ73 354 aa3.93□□□□□ -1.78
HMGB1P23-201ENST00000518743 SH3PXD2BA1X283 911 aa3.93□□□□□ -1.78
HMGB1P23-201ENST00000518743 PMS2P5A8MQ11 134 aa3.93□□□□□ -1.78
HMGB1P23-201ENST00000518743 C9J4A7 227 aa3.93□□□□□ -1.78
HMGB1P23-201ENST00000518743 PPIAL4DF5H284 164 aa3.93□□□□□ -1.78
HMGB1P23-201ENST00000518743 H0Y8G0 127 aa3.93□□□□□ -1.78
HMGB1P23-201ENST00000518743 FAM189A1O60320 539 aa3.93□□□□□ -1.78
HMGB1P23-201ENST00000518743 SCRG1O75711 98 aa3.93□□□□□ -1.78
HMGB1P23-201ENST00000518743 TM7SF2O76062 418 aa3.93□□□□□ -1.78
HMGB1P23-201ENST00000518743 F10P00742 488 aa3.93□□□□□ -1.78
HMGB1P23-201ENST00000518743 FHP07954 510 aa3.93□□□□□ -1.78
HMGB1P23-201ENST00000518743 PPIAL4GP0DN37 164 aa3.93□□□□□ -1.78
HMGB1P23-201ENST00000518743 CCNB1P14635 433 aa3.93□□□□□ -1.78
HMGB1P23-201ENST00000518743 AK4P27144 223 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P23-201ENST00000518743 PEX19P40855 299 aa3.93□□□□□ -1.78
HMGB1P23-201ENST00000518743 SSR1P43307 286 aaKnown RBP3.93□□□□□ -1.78
HMGB1P23-201ENST00000518743 CEBPDP49716 269 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P23-201ENST00000518743 EMDP50402 254 aa3.93□□□□□ -1.78
HMGB1P23-201ENST00000518743 GFERP55789 205 aa3.93□□□□□ -1.78
HMGB1P23-201ENST00000518743 ATP5IP56385 69 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P23-201ENST00000518743 RPL27P61353 136 aaKnown RBP3.93□□□□□ -1.78
HMGB1P23-201ENST00000518743 TNNC1P63316 161 aa3.93□□□□□ -1.78
HMGB1P23-201ENST00000518743 NUCB2P80303 420 aa3.93□□□□□ -1.78
HMGB1P23-201ENST00000518743 RPL36AP83881 106 aaKnown RBP3.93□□□□□ -1.78
HMGB1P23-201ENST00000518743 DHODHQ02127 395 aa3.93□□□□□ -1.78
HMGB1P23-201ENST00000518743 ARL16Q0P5N6 197 aa3.93□□□□□ -1.78
HMGB1P23-201ENST00000518743 PEX6Q13608 980 aa3.93□□□□□ -1.78
HMGB1P23-201ENST00000518743 RBBP5Q15291 538 aaKnown RBP3.93□□□□□ -1.78
HMGB1P23-201ENST00000518743 KLHL40Q2TBA0 621 aa3.93□□□□□ -1.78
HMGB1P23-201ENST00000518743 ZNF718Q3SXZ3 478 aa3.93□□□□□ -1.78
HMGB1P23-201ENST00000518743 C6orf52Q5T4I8 152 aa3.93□□□□□ -1.78
HMGB1P23-201ENST00000518743 DMKNQ6E0U4 476 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P23-201ENST00000518743 LEG1Q6P5S2 330 aa3.93□□□□□ -1.78
HMGB1P23-201ENST00000518743 BLIDQ8IZY5 108 aa3.93□□□□□ -1.78
HMGB1P23-201ENST00000518743 ARFGAP2Q8N6H7 521 aa3.93□□□□□ -1.78
HMGB1P23-201ENST00000518743 ADAD2Q8NCV1 583 aaKnown RBP3.93□□□□□ -1.78
HMGB1P23-201ENST00000518743 OR13C2Q8NGS9 318 aa3.93□□□□□ -1.78
HMGB1P23-201ENST00000518743 ERMNQ8TAM6 284 aa3.93□□□□□ -1.78
HMGB1P23-201ENST00000518743 VOPP1Q96AW1 172 aa3.93□□□□□ -1.78
HMGB1P23-201ENST00000518743 TUBGCP3Q96CW5 907 aa3.93□□□□□ -1.78
HMGB1P23-201ENST00000518743 SIGLEC12Q96PQ1 595 aa3.93□□□□□ -1.78
HMGB1P23-201ENST00000518743 ALKBH3Q96Q83 286 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P23-201ENST00000518743 ANP32EQ9BTT0 268 aa3.93□□□□□ -1.78
HMGB1P23-201ENST00000518743 APOOQ9BUR5 198 aa3.93□□□□□ -1.78
HMGB1P23-201ENST00000518743 SLC7A5P2Q9GIP4 190 aa3.93□□□□□ -1.78
HMGB1P23-201ENST00000518743 ZNF556Q9HAH1 456 aa3.93□□□□□ -1.78
HMGB1P23-201ENST00000518743 FGF22Q9HCT0 170 aa3.93□□□□□ -1.78
HMGB1P23-201ENST00000518743 B3GAT2Q9NPZ5 323 aa3.93□□□□□ -1.78
HMGB1P23-201ENST00000518743 GHRLQ9UBU3 117 aa3.93□□□□□ -1.78
HMGB1P23-201ENST00000518743 KCNG2Q9UJ96 466 aa3.93□□□□□ -1.78
HMGB1P23-201ENST00000518743 PURGQ9UJV8 347 aaKnown RBP3.93□□□□□ -1.78
HMGB1P23-201ENST00000518743 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.93□□□□□ -1.78
HMGB1P23-201ENST00000518743 DDX19BQ9UMR2 479 aa3.93□□□□□ -1.78
HMGB1P23-201ENST00000518743 NPIPA1Q9UND3 350 aa3.93□□□□□ -1.78
HMGB1P23-201ENST00000518743 ZNF835Q9Y2P0 537 aa3.93□□□□□ -1.78
HMGB1P23-201ENST00000518743 HERC2O95714 4834 aa3.93□□□□□ -1.78
HMGB1P23-201ENST00000518743 MED12Q93074 2177 aa3.92□□□□□ -1.78
HMGB1P23-201ENST00000518743 FBLL1A6NHQ2 334 aaKnown RBP3.92□□□□□ -1.78
HMGB1P23-201ENST00000518743 USP27XA6NNY8 438 aa3.92□□□□□ -1.78
HMGB1P23-201ENST00000518743 TPST2O60704 377 aa3.92□□□□□ -1.78
HMGB1P23-201ENST00000518743 SCGNO76038 276 aa3.92□□□□□ -1.78
HMGB1P23-201ENST00000518743 NTN1O95631 604 aa3.92□□□□□ -1.78
HMGB1P23-201ENST00000518743 HPRP00739 348 aa3.92□□□□□ -1.78
HMGB1P23-201ENST00000518743 DBTP11182 482 aaKnown RBP3.92□□□□□ -1.78
HMGB1P23-201ENST00000518743 CCDC130P13994 396 aa3.92□□□□□ -1.78
HMGB1P23-201ENST00000518743 HNF1AP20823 631 aa3.92□□□□□ -1.78
HMGB1P23-201ENST00000518743 CALB2P22676 271 aa3.92□□□□□ -1.78
HMGB1P23-201ENST00000518743 ADORA2BP29275 332 aa3.92□□□□□ -1.78
HMGB1P23-201ENST00000518743 PPT1P50897 306 aa3.92□□□□□ -1.78
HMGB1P23-201ENST00000518743 SNRPD1P62314 119 aaKnown RBP3.92□□□□□ -1.78
HMGB1P23-201ENST00000518743 NAAAQ02083 359 aa3.92□□□□□ -1.78
HMGB1P23-201ENST00000518743 ZMYND11Q15326 602 aa3.92□□□□□ -1.78
HMGB1P23-201ENST00000518743 CYBRD1Q53TN4 286 aa3.92□□□□□ -1.78
HMGB1P23-201ENST00000518743 ASPHD2Q6ICH7 369 aa3.92□□□□□ -1.78
HMGB1P23-201ENST00000518743 LCLAT1Q6UWP7 414 aa3.92□□□□□ -1.78
HMGB1P23-201ENST00000518743 LHFPL4Q7Z7J7 247 aa3.92□□□□□ -1.78
HMGB1P23-201ENST00000518743 SCD5Q86SK9 330 aa3.92□□□□□ -1.78
HMGB1P23-201ENST00000518743 C17orf82Q86X59 251 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P23-201ENST00000518743 ZNF679Q8IYX0 411 aa3.92□□□□□ -1.78
HMGB1P23-201ENST00000518743 EIF1ADQ8N9N8 165 aaKnown RBP3.92□□□□□ -1.78
HMGB1P23-201ENST00000518743 TMEM161BQ8NDZ6 487 aa3.92□□□□□ -1.78
HMGB1P23-201ENST00000518743 TRIM58Q8NG06 486 aa3.92□□□□□ -1.78
HMGB1P23-201ENST00000518743 PNPT1Q8TCS8 783 aaKnown RBP3.92□□□□□ -1.78
HMGB1P23-201ENST00000518743 RNF139Q8WU17 664 aa3.92□□□□□ -1.78
HMGB1P23-201ENST00000518743 PCNPQ8WW12 178 aaKnown RBP3.92□□□□□ -1.78
HMGB1P23-201ENST00000518743 SPRYD4Q8WW59 207 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P23-201ENST00000518743 ZNF524Q96C55 264 aa3.92□□□□□ -1.78
HMGB1P23-201ENST00000518743 TPD52L3Q96J77 140 aa3.92□□□□□ -1.78
HMGB1P23-201ENST00000518743 C9orf72Q96LT7 481 aa3.92□□□□□ -1.78
HMGB1P23-201ENST00000518743 CLEC7AQ9BXN2 247 aa3.92□□□□□ -1.78
HMGB1P23-201ENST00000518743 REG4Q9BYZ8 158 aa3.92□□□□□ -1.78
HMGB1P23-201ENST00000518743 VCX2Q9H322 139 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms