RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 SHFQ7M4L6 423 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 PRR22Q8IZ63 422 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 CLIP4Q8N3C7 705 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 LIX1Q8N485 282 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 ZNF781Q8N8C0 355 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 WDSUB1Q8N9V3 476 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 NAXEQ8NCW5 288 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 OR10Q1Q8NGQ4 319 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 OR9A2Q8NGT5 310 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 PSMA8Q8TAA3 256 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 NEIL3Q8TAT5 605 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 ZNF675Q8TD23 568 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 TWIST2Q8WVJ9 160 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 EXOSC8Q96B26 276 aaKnown RBP3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 MTERF3Q96E29 417 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 OMA1Q96E52 524 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 ZNF597Q96LX8 424 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 PPP3R2Q96LZ3 170 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 ZNF570Q96NI8 536 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 AMDHD1Q96NU7 426 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 BTBD9Q96Q07 612 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 NODALQ96S42 347 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 EBPLQ9BY08 206 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 KRTAP2-2Q9BYT5 123 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 NXF5Q9H1B4 397 aaKnown RBP3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 REEP4Q9H6H4 257 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 ANKRA2Q9H9E1 313 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 MEAF6Q9HAF1 191 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 MCCC2Q9HCC0 563 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 MYNNQ9NPC7 610 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 KCNJ16Q9NPI9 418 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 PFDN4Q9NQP4 134 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 PCDHB16Q9NRJ7 776 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 NKIRAS1Q9NYS0 192 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 PRODH2Q9UF12 536 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 BCAP29Q9UHQ4 241 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 BAIAP2L1Q9UHR4 511 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 ATP6V1HQ9UI12 483 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 ZNF580Q9UK33 172 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 CFL2Q9Y281 166 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 C15orf41Q9Y2V0 281 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 LSM4Q9Y4Z0 139 aaKnown RBP3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 ZNF780BQ9Y6R6 833 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 HEATR5AQ86XA9 2040 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 MAST4O15021 2626 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 UNC79Q9P2D8 2635 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 NCOA6Q14686 2063 aaPredicted RBP3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 NCKAP5O14513 1909 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 CSMD2Q7Z408 3487 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 FBN2P35556 2912 aa3.13□□□□□ -1.91
UBE2D3-226ENST00000508635 GNG14A0A1W2PPG7 69 aa3.12□□□□□ -1.91
UBE2D3-226ENST00000508635 hDV102S1A0JD36 115 aa3.12□□□□□ -1.91
UBE2D3-226ENST00000508635 OR6C70A6NIJ9 312 aa3.12□□□□□ -1.91
UBE2D3-226ENST00000508635 NPIPB11E5RHQ5 1161 aa3.12□□□□□ -1.91
UBE2D3-226ENST00000508635 UPK1AO00322 258 aa3.12□□□□□ -1.91
UBE2D3-226ENST00000508635 SDHDO14521 159 aa3.12□□□□□ -1.91
UBE2D3-226ENST00000508635 LDLRAD4O15165 306 aa3.12□□□□□ -1.91
UBE2D3-226ENST00000508635 ACOX3O15254 700 aa3.12□□□□□ -1.91
UBE2D3-226ENST00000508635 HSPA12AO43301 675 aa3.12□□□□□ -1.91
UBE2D3-226ENST00000508635 TSPAN2O60636 221 aa3.12□□□□□ -1.91
UBE2D3-226ENST00000508635 SCN2BO60939 215 aa3.12□□□□□ -1.91
UBE2D3-226ENST00000508635 ICOSLGO75144 302 aa3.12□□□□□ -1.91
UBE2D3-226ENST00000508635 PEX11AO75192 247 aa3.12□□□□□ -1.91
UBE2D3-226ENST00000508635 NME6O75414 186 aaPredicted RBP3.12□□□□□ -1.91
UBE2D3-226ENST00000508635 REM1O75628 298 aa3.12□□□□□ -1.91
UBE2D3-226ENST00000508635 CBR3O75828 277 aa3.12□□□□□ -1.91
UBE2D3-226ENST00000508635 PSMG1O95456 288 aa3.12□□□□□ -1.91
UBE2D3-226ENST00000508635 HSPA4LO95757 839 aa3.12□□□□□ -1.91
UBE2D3-226ENST00000508635 ACTL6AO96019 429 aa3.12□□□□□ -1.91
UBE2D3-226ENST00000508635 G6PDP11413 515 aa3.12□□□□□ -1.91
UBE2D3-226ENST00000508635 FCGR1AP12314 374 aa3.12□□□□□ -1.91
UBE2D3-226ENST00000508635 ETFAP13804 333 aa3.12□□□□□ -1.91
UBE2D3-226ENST00000508635 CPN1P15169 458 aa3.12□□□□□ -1.91
UBE2D3-226ENST00000508635 PRPS1L1P21108 318 aa3.12□□□□□ -1.91
UBE2D3-226ENST00000508635 CEACAM8P31997 349 aaPredicted RBP3.12□□□□□ -1.91
UBE2D3-226ENST00000508635 TIMP3P35625 211 aa3.12□□□□□ -1.91
UBE2D3-226ENST00000508635 ASMTP46597 345 aa3.12□□□□□ -1.91
UBE2D3-226ENST00000508635 MRPL19P49406 292 aaKnown RBP3.12□□□□□ -1.91
UBE2D3-226ENST00000508635 DLX5P56178 289 aa3.12□□□□□ -1.91
UBE2D3-226ENST00000508635 PSPHP78330 225 aa3.12□□□□□ -1.91
UBE2D3-226ENST00000508635 PLCXD2Q0VAA5 305 aa3.12□□□□□ -1.91
UBE2D3-226ENST00000508635 SNTB1Q13884 538 aaKnown RBP3.12□□□□□ -1.91
UBE2D3-226ENST00000508635 SF3B4Q15427 424 aaKnown RBP eCLIP3.12□□□□□ -1.917e-7■■■■■ 28.1
UBE2D3-226ENST00000508635 IMPG1Q17R60 797 aa3.12□□□□□ -1.91
UBE2D3-226ENST00000508635 SLC25A35Q3KQZ1 300 aa3.12□□□□□ -1.91
UBE2D3-226ENST00000508635 MMEL1Q495T6 779 aa3.12□□□□□ -1.91
UBE2D3-226ENST00000508635 ACSF3Q4G176 576 aaPredicted RBP3.12□□□□□ -1.91
UBE2D3-226ENST00000508635 ATP6AP1LQ52LC2 224 aa3.12□□□□□ -1.91
UBE2D3-226ENST00000508635 EIPR1Q53HC9 387 aa3.12□□□□□ -1.91
UBE2D3-226ENST00000508635 DCST1Q5T197 706 aa3.12□□□□□ -1.91
UBE2D3-226ENST00000508635 IL23RQ5VWK5 629 aa3.12□□□□□ -1.91
UBE2D3-226ENST00000508635 NSUN5P2Q63ZY6 315 aa3.12□□□□□ -1.91
UBE2D3-226ENST00000508635 HIST2H2BDQ6DRA6 164 aa3.12□□□□□ -1.91
UBE2D3-226ENST00000508635 C8orf82Q6P1X6 216 aaPredicted RBP3.12□□□□□ -1.91
UBE2D3-226ENST00000508635 ANGPTL8Q6UXH0 198 aa3.12□□□□□ -1.91
UBE2D3-226ENST00000508635 NPSR1Q6W5P4 371 aa3.12□□□□□ -1.91
UBE2D3-226ENST00000508635 R3HCC1LQ7Z5L2 792 aaKnown RBP3.12□□□□□ -1.91
UBE2D3-226ENST00000508635 SPATA19Q7Z5L4 167 aa3.12□□□□□ -1.91
UBE2D3-226ENST00000508635 CAMKMTQ7Z624 323 aa3.12□□□□□ -1.91
UBE2D3-226ENST00000508635 YRDCQ86U90 279 aaKnown RBP3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 162.2 ms