RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 DEFB109BQ30KR1 87 aa9.28□□□□□ -0.92
HDAC3-214ENST00000495485 FAM205BPQ63HN1 556 aa9.28□□□□□ -0.92
HDAC3-214ENST00000495485 C3orf33Q6P1S2 294 aa9.28□□□□□ -0.92
HDAC3-214ENST00000495485 POMZP3Q6PJE2 187 aa9.28□□□□□ -0.92
HDAC3-214ENST00000495485 LYPD8Q6UX82 237 aa9.28□□□□□ -0.92
HDAC3-214ENST00000495485 THSD4Q6ZMP0 1018 aa9.28□□□□□ -0.92
HDAC3-214ENST00000495485 HDDC2Q7Z4H3 204 aa9.28□□□□□ -0.92
HDAC3-214ENST00000495485 BCDIN3DQ7Z5W3 292 aaKnown RBP9.28□□□□□ -0.92
HDAC3-214ENST00000495485 ADCK1Q86TW2 530 aa9.28□□□□□ -0.92
HDAC3-214ENST00000495485 ADGRG3Q86Y34 549 aa9.28□□□□□ -0.92
HDAC3-214ENST00000495485 SCAIQ8N9R8 606 aa9.28□□□□□ -0.92
HDAC3-214ENST00000495485 OR51G2Q8NGK0 314 aa9.28□□□□□ -0.92
HDAC3-214ENST00000495485 MFSD8Q8NHS3 518 aa9.28□□□□□ -0.92
HDAC3-214ENST00000495485 TAAR8Q969N4 342 aa9.28□□□□□ -0.92
HDAC3-214ENST00000495485 SLC25A36Q96CQ1 311 aa9.28□□□□□ -0.92
HDAC3-214ENST00000495485 KTI12Q96EK9 354 aaPredicted RBP9.28□□□□□ -0.92
HDAC3-214ENST00000495485 SNX18Q96RF0 628 aa9.28□□□□□ -0.92
HDAC3-214ENST00000495485 MNTQ99583 582 aa9.28□□□□□ -0.92
HDAC3-214ENST00000495485 DCUN1D5Q9BTE7 237 aa9.28□□□□□ -0.92
HDAC3-214ENST00000495485 KATNB1Q9BVA0 655 aa9.28□□□□□ -0.92
HDAC3-214ENST00000495485 ANGPTL4Q9BY76 406 aa9.28□□□□□ -0.92
HDAC3-214ENST00000495485 MED11Q9P086 117 aa9.28□□□□□ -0.92
HDAC3-214ENST00000495485 LHX6Q9UPM6 363 aa9.28□□□□□ -0.92
HDAC3-214ENST00000495485 GSTK1Q9Y2Q3 226 aa9.28□□□□□ -0.92
HDAC3-214ENST00000495485 NOX1Q9Y5S8 564 aa9.28□□□□□ -0.92
HDAC3-214ENST00000495485 MYO18BQ8IUG5 2567 aa9.27□□□□□ -0.92
HDAC3-214ENST00000495485 A6NIZ1 184 aa9.27□□□□□ -0.93
HDAC3-214ENST00000495485 FAM183AA6NL82 134 aa9.27□□□□□ -0.93
HDAC3-214ENST00000495485 M0R082 166 aa9.27□□□□□ -0.93
HDAC3-214ENST00000495485 SEC14L5O43304 696 aa9.27□□□□□ -0.93
HDAC3-214ENST00000495485 RNF13O43567 381 aa9.27□□□□□ -0.93
HDAC3-214ENST00000495485 CBR3O75828 277 aa9.27□□□□□ -0.93
HDAC3-214ENST00000495485 SLC2A10O95528 541 aa9.27□□□□□ -0.93
HDAC3-214ENST00000495485 MT-ND5P03915 603 aa9.27□□□□□ -0.93
HDAC3-214ENST00000495485 OR2T7P0C7T2 308 aa9.27□□□□□ -0.93
HDAC3-214ENST00000495485 TFPIP10646 304 aa9.27□□□□□ -0.93
HDAC3-214ENST00000495485 HIST1H1CP16403 213 aaKnown RBP9.27□□□□□ -0.93
HDAC3-214ENST00000495485 CPEP16870 476 aa9.27□□□□□ -0.93
HDAC3-214ENST00000495485 UQCRC1P31930 480 aa9.27□□□□□ -0.93
HDAC3-214ENST00000495485 IDUAP35475 653 aa9.27□□□□□ -0.93
HDAC3-214ENST00000495485 LIPAP38571 399 aa9.27□□□□□ -0.93
HDAC3-214ENST00000495485 AQP2P41181 271 aa9.27□□□□□ -0.93
HDAC3-214ENST00000495485 ETV1P50549 477 aa9.27□□□□□ -0.93
HDAC3-214ENST00000495485 SLC25A1P53007 311 aa9.27□□□□□ -0.93
HDAC3-214ENST00000495485 DSCR4P56555 118 aaPredicted RBP9.27□□□□□ -0.93
HDAC3-214ENST00000495485 RAP1BP61224 184 aa9.27□□□□□ -0.93
HDAC3-214ENST00000495485 ACTA2P62736 377 aa9.27□□□□□ -0.93
HDAC3-214ENST00000495485 RAP1AP62834 184 aa9.27□□□□□ -0.93
HDAC3-214ENST00000495485 ERVK-25P63136 954 aa9.27□□□□□ -0.93
HDAC3-214ENST00000495485 ACTG2P63267 376 aa9.27□□□□□ -0.93
HDAC3-214ENST00000495485 EGR4Q05215 589 aa9.27□□□□□ -0.93
HDAC3-214ENST00000495485 RPL18Q07020 188 aaKnown RBP9.27□□□□□ -0.93
HDAC3-214ENST00000495485 ZP4Q12836 540 aa9.27□□□□□ -0.93
HDAC3-214ENST00000495485 SRSF6Q13247 344 aaKnown RBP9.27□□□□□ -0.93
HDAC3-214ENST00000495485 ATP1A4Q13733 1029 aa9.27□□□□□ -0.93
HDAC3-214ENST00000495485 CRMP1Q14194 572 aa9.27□□□□□ -0.93
HDAC3-214ENST00000495485 GALEQ14376 348 aa9.27□□□□□ -0.93
HDAC3-214ENST00000495485 TRAM1Q15629 374 aa9.27□□□□□ -0.93
HDAC3-214ENST00000495485 TOMM34Q15785 309 aaPredicted RBP9.27□□□□□ -0.93
HDAC3-214ENST00000495485 CTF1Q16619 201 aa9.27□□□□□ -0.93
HDAC3-214ENST00000495485 GLYR1Q49A26 553 aaPredicted RBP9.27□□□□□ -0.93
HDAC3-214ENST00000495485 DESI1Q6ICB0 168 aa9.27□□□□□ -0.93
HDAC3-214ENST00000495485 H3F3CQ6NXT2 135 aa9.27□□□□□ -0.93
HDAC3-214ENST00000495485 C16orf47Q6ZP98 133 aaPredicted RBP9.27□□□□□ -0.93
HDAC3-214ENST00000495485 SLC16A12Q6ZSM3 486 aa9.27□□□□□ -0.93
HDAC3-214ENST00000495485 PLCZ1Q86YW0 608 aa9.27□□□□□ -0.93
HDAC3-214ENST00000495485 GALNT16Q8N428 558 aa9.27□□□□□ -0.93
HDAC3-214ENST00000495485 LRRC17Q8N6Y2 441 aa9.27□□□□□ -0.93
HDAC3-214ENST00000495485 OR10G3Q8NGC4 313 aa9.27□□□□□ -0.93
HDAC3-214ENST00000495485 OR1J4Q8NGS1 313 aa9.27□□□□□ -0.93
HDAC3-214ENST00000495485 OR2T4Q8NH00 348 aa9.27□□□□□ -0.93
HDAC3-214ENST00000495485 OR2T27Q8NH04 317 aa9.27□□□□□ -0.93
HDAC3-214ENST00000495485 OR4K13Q8NH42 304 aa9.27□□□□□ -0.93
HDAC3-214ENST00000495485 MOSPD2Q8NHP6 518 aa9.27□□□□□ -0.93
HDAC3-214ENST00000495485 PAQR8Q8TEZ7 354 aa9.27□□□□□ -0.93
HDAC3-214ENST00000495485 S100ZQ8WXG8 99 aa9.27□□□□□ -0.93
HDAC3-214ENST00000495485 PTP4A1Q93096 173 aa9.27□□□□□ -0.93
HDAC3-214ENST00000495485 FRMD6Q96NE9 622 aa9.27□□□□□ -0.93
HDAC3-214ENST00000495485 CNN2Q99439 309 aaKnown RBP9.27□□□□□ -0.93
HDAC3-214ENST00000495485 RTN4RQ9BZR6 473 aa9.27□□□□□ -0.93
HDAC3-214ENST00000495485 NAA50Q9GZZ1 169 aaKnown RBP9.27□□□□□ -0.93
HDAC3-214ENST00000495485 ERVK13-1Q9NX77 482 aa9.27□□□□□ -0.93
HDAC3-214ENST00000495485 MRPL39Q9NYK5 338 aaKnown RBP9.27□□□□□ -0.93
HDAC3-214ENST00000495485 FBXL4Q9UKA2 621 aa9.27□□□□□ -0.93
HDAC3-214ENST00000495485 STUB1Q9UNE7 303 aa9.27□□□□□ -0.93
HDAC3-214ENST00000495485 CHCHD2Q9Y6H1 151 aaPredicted RBP9.27□□□□□ -0.93
HDAC3-214ENST00000495485 CPAMD8Q8IZJ3 1885 aa9.27□□□□□ -0.93
HDAC3-214ENST00000495485 TEX13CA0A0J9YWL9 993 aa9.26□□□□□ -0.93
HDAC3-214ENST00000495485 A0A1W2PPW3 197 aa9.26□□□□□ -0.93
HDAC3-214ENST00000495485 GJE1A6NN92 205 aa9.26□□□□□ -0.93
HDAC3-214ENST00000495485 VGLL3A8MV65 326 aa9.26□□□□□ -0.93
HDAC3-214ENST00000495485 CENPBD1B2RD01 187 aa9.26□□□□□ -0.93
HDAC3-214ENST00000495485 PHYHO14832 338 aa9.26□□□□□ -0.93
HDAC3-214ENST00000495485 ATXN7O15265 892 aaPredicted RBP9.26□□□□□ -0.93
HDAC3-214ENST00000495485 NPIPB7O75200 414 aa9.26□□□□□ -0.93
HDAC3-214ENST00000495485 CLPXO76031 633 aa9.26□□□□□ -0.93
HDAC3-214ENST00000495485 GLCEO94923 617 aa9.26□□□□□ -0.93
HDAC3-214ENST00000495485 SBK2P0C263 348 aa9.26□□□□□ -0.93
HDAC3-214ENST00000495485 CD53P19397 219 aa9.26□□□□□ -0.93
HDAC3-214ENST00000495485 GALP22466 123 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms