RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 IER3IP1Q9Y5U9 82 aa17.29■□□□□ 0.36
USP39-218ENST00000493829 A0A1W2PNV4 684 aa17.29■□□□□ 0.36
USP39-218ENST00000493829 TGM6O95932 706 aa17.29■□□□□ 0.36
USP39-218ENST00000493829 TSPAN19P0C672 248 aa17.29■□□□□ 0.36
USP39-218ENST00000493829 EDN3P14138 238 aa17.29■□□□□ 0.36
USP39-218ENST00000493829 C1DQ13901 141 aaKnown RBP17.29■□□□□ 0.36
USP39-218ENST00000493829 PGGHGQ32M88 737 aa17.29■□□□□ 0.36
USP39-218ENST00000493829 ACSF3Q4G176 576 aaPredicted RBP17.29■□□□□ 0.36
USP39-218ENST00000493829 SLC35F1Q5T1Q4 408 aa17.29■□□□□ 0.36
USP39-218ENST00000493829 EEF1A1P5Q5VTE0 462 aa17.29■□□□□ 0.36
USP39-218ENST00000493829 ABLIM2Q6H8Q1 611 aa17.29■□□□□ 0.36
USP39-218ENST00000493829 SLC27A4Q6P1M0 643 aa17.29■□□□□ 0.36
USP39-218ENST00000493829 RPTNQ6XPR3 784 aa17.29■□□□□ 0.36
USP39-218ENST00000493829 P4HA3Q7Z4N8 544 aa17.29■□□□□ 0.36
USP39-218ENST00000493829 UEVLDQ8IX04 471 aa17.29■□□□□ 0.36
USP39-218ENST00000493829 OR2T33Q8NG76 320 aa17.29■□□□□ 0.36
USP39-218ENST00000493829 FAM57AQ8TBR7 257 aa17.29■□□□□ 0.36
USP39-218ENST00000493829 RASD2Q96D21 266 aa17.29■□□□□ 0.36
USP39-218ENST00000493829 ERMAPQ96PL5 475 aaPredicted RBP17.29■□□□□ 0.36
USP39-218ENST00000493829 TSPAN32Q96QS1 320 aa17.29■□□□□ 0.36
USP39-218ENST00000493829 MED29Q9NX70 200 aa17.29■□□□□ 0.36
USP39-218ENST00000493829 CLEC4AQ9UMR7 237 aa17.29■□□□□ 0.36
USP39-218ENST00000493829 GMPPBQ9Y5P6 360 aa17.29■□□□□ 0.36
USP39-218ENST00000493829 TEX13CA0A0J9YWL9 993 aa17.28■□□□□ 0.36
USP39-218ENST00000493829 ZAR1LA6NP61 321 aa17.28■□□□□ 0.36
USP39-218ENST00000493829 BHLHE40O14503 412 aa17.28■□□□□ 0.36
USP39-218ENST00000493829 SLC19A2O60779 497 aa17.28■□□□□ 0.36
USP39-218ENST00000493829 PRB1P04280 392 aa17.28■□□□□ 0.36
USP39-218ENST00000493829 IFNGR1P15260 489 aa17.28■□□□□ 0.36
USP39-218ENST00000493829 CAPGP40121 348 aa17.28■□□□□ 0.36
USP39-218ENST00000493829 ANKDD1AQ495B1 522 aa17.28■□□□□ 0.36
USP39-218ENST00000493829 ACSM5Q6NUN0 579 aa17.28■□□□□ 0.36
USP39-218ENST00000493829 LSM14AQ8ND56 463 aaKnown RBP17.28■□□□□ 0.36
USP39-218ENST00000493829 RNF128Q8TEB7 428 aa17.28■□□□□ 0.36
USP39-218ENST00000493829 RASD1Q9Y272 281 aa17.28■□□□□ 0.36
USP39-218ENST00000493829 LOC100130705A0A1B0GUX0 176 aa17.27■□□□□ 0.36
USP39-218ENST00000493829 A0A1W2PRG6 482 aa17.27■□□□□ 0.36
USP39-218ENST00000493829 H0YJX3 145 aa17.27■□□□□ 0.36
USP39-218ENST00000493829 GNAO1P09471 354 aa17.27■□□□□ 0.36
USP39-218ENST00000493829 NOS3P29474 1203 aa17.27■□□□□ 0.36
USP39-218ENST00000493829 SMSP52788 366 aa17.27■□□□□ 0.36
USP39-218ENST00000493829 RASGEF1BQ0VAM2 473 aa17.27■□□□□ 0.36
USP39-218ENST00000493829 ACKR1Q16570 336 aa17.27■□□□□ 0.36
USP39-218ENST00000493829 DPY19L2P2Q6ZN68 376 aa17.27■□□□□ 0.36
USP39-218ENST00000493829 ANKK1Q8NFD2 765 aa17.27■□□□□ 0.36
USP39-218ENST00000493829 OR9K2Q8NGE7 335 aa17.27■□□□□ 0.36
USP39-218ENST00000493829 FAM81AQ8TBF8 368 aa17.27■□□□□ 0.36
USP39-218ENST00000493829 ZPLD1Q8TCW7 415 aa17.27■□□□□ 0.36
USP39-218ENST00000493829 TXNDC15Q96J42 360 aa17.27■□□□□ 0.36
USP39-218ENST00000493829 Q96M85 177 aa17.27■□□□□ 0.36
USP39-218ENST00000493829 OXGR1Q96P68 337 aa17.27■□□□□ 0.36
USP39-218ENST00000493829 SLC25A19Q9HC21 320 aa17.27■□□□□ 0.36
USP39-218ENST00000493829 CLCF1Q9UBD9 225 aa17.27■□□□□ 0.36
USP39-218ENST00000493829 TINAGQ9UJW2 476 aa17.27■□□□□ 0.36
USP39-218ENST00000493829 CYTIPO60759 359 aa17.26■□□□□ 0.35
USP39-218ENST00000493829 SLC2A10O95528 541 aa17.26■□□□□ 0.35
USP39-218ENST00000493829 CD14P08571 375 aa17.26■□□□□ 0.35
USP39-218ENST00000493829 ZNF43P17038 809 aa17.26■□□□□ 0.35
USP39-218ENST00000493829 GIPRP48546 466 aa17.26■□□□□ 0.35
USP39-218ENST00000493829 HSPA13P48723 471 aa17.26■□□□□ 0.35
USP39-218ENST00000493829 ADARB1P78563 741 aaKnown RBP17.26■□□□□ 0.35
USP39-218ENST00000493829 CDK5Q00535 292 aa17.26■□□□□ 0.35
USP39-218ENST00000493829 MYBPC1Q00872 1141 aa17.26■□□□□ 0.35
USP39-218ENST00000493829 ZP4Q12836 540 aa17.26■□□□□ 0.35
USP39-218ENST00000493829 SLC35D2Q76EJ3 337 aa17.26■□□□□ 0.35
USP39-218ENST00000493829 WDFY1Q8IWB7 410 aa17.26■□□□□ 0.35
USP39-218ENST00000493829 RPRMLQ8N4K4 120 aa17.26■□□□□ 0.35
USP39-218ENST00000493829 GPX7Q96SL4 187 aaPredicted RBP17.26■□□□□ 0.35
USP39-218ENST00000493829 EMC6Q9BV81 110 aa17.26■□□□□ 0.35
USP39-218ENST00000493829 NRIP3Q9NQ35 241 aa17.26■□□□□ 0.35
USP39-218ENST00000493829 TVP23BQ9NYZ1 205 aa17.26■□□□□ 0.35
USP39-218ENST00000493829 GRHPRQ9UBQ7 328 aa17.26■□□□□ 0.35
USP39-218ENST00000493829 NOX1Q9Y5S8 564 aa17.26■□□□□ 0.35
USP39-218ENST00000493829 KALRNO60229 2985 aa17.26■□□□□ 0.35
USP39-218ENST00000493829 FIGNL2A6NMB9 653 aa17.26■□□□□ 0.35
USP39-218ENST00000493829 ZNF716A6NP11 495 aa17.26■□□□□ 0.35
USP39-218ENST00000493829 H7C1C5 153 aa17.26■□□□□ 0.35
USP39-218ENST00000493829 PRRG2O14669 202 aa17.26■□□□□ 0.35
USP39-218ENST00000493829 TRAF3IP2O43734 574 aaPredicted RBP17.26■□□□□ 0.35
USP39-218ENST00000493829 RPS6KA3P51812 740 aa17.26■□□□□ 0.35
USP39-218ENST00000493829 CLDN17P56750 224 aa17.26■□□□□ 0.35
USP39-218ENST00000493829 LCN6P62502 163 aa17.26■□□□□ 0.35
USP39-218ENST00000493829 RBPJQ06330 500 aa17.26■□□□□ 0.35
USP39-218ENST00000493829 DBPQ10586 325 aaPredicted RBP17.26■□□□□ 0.35
USP39-218ENST00000493829 SLC17A1Q14916 467 aa17.26■□□□□ 0.35
USP39-218ENST00000493829 SLX4IPQ5VYV7 408 aa17.26■□□□□ 0.35
USP39-218ENST00000493829 PXKQ7Z7A4 578 aa17.26■□□□□ 0.35
USP39-218ENST00000493829 CCDC71Q8IV32 467 aaPredicted RBP17.26■□□□□ 0.35
USP39-218ENST00000493829 MCEMP1Q8IX19 187 aa17.26■□□□□ 0.35
USP39-218ENST00000493829 ZNF385AQ96PM9 386 aaKnown RBP17.26■□□□□ 0.35
USP39-218ENST00000493829 ZNF346Q9UL40 294 aaKnown RBP17.26■□□□□ 0.35
USP39-218ENST00000493829 AHRRA9YTQ3 701 aa17.25■□□□□ 0.35
USP39-218ENST00000493829 GGT2P36268 569 aa17.25■□□□□ 0.35
USP39-218ENST00000493829 BIDP55957 195 aa17.25■□□□□ 0.35
USP39-218ENST00000493829 C1orf185Q5T7R7 199 aa17.25■□□□□ 0.35
USP39-218ENST00000493829 CARD17Q5XLA6 110 aa17.25■□□□□ 0.35
USP39-218ENST00000493829 C12orf73Q69YU5 71 aa17.25■□□□□ 0.35
USP39-218ENST00000493829 CASP12Q6UXS9 341 aa17.25■□□□□ 0.35
USP39-218ENST00000493829 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.25■□□□□ 0.35
USP39-218ENST00000493829 FAM122BQ7Z309 247 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms