RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 IGHG4P01861 327 aa0.78□□□□□ -2.28
CCDC93-209ENST00000488908 ALDOBP05062 364 aa0.78□□□□□ -2.28
CCDC93-209ENST00000488908 IL4P05112 153 aa0.78□□□□□ -2.28
CCDC93-209ENST00000488908 CSF3P09919 207 aa0.78□□□□□ -2.28
CCDC93-209ENST00000488908 RBMY1DP0C7P1 496 aaKnown RBP0.78□□□□□ -2.28
CCDC93-209ENST00000488908 LINC00869P0C866 280 aa0.78□□□□□ -2.28
CCDC93-209ENST00000488908 GKN3PP0CG01 181 aa0.78□□□□□ -2.28
CCDC93-209ENST00000488908 RBMY1A1P0DJD3 496 aaKnown RBP0.78□□□□□ -2.28
CCDC93-209ENST00000488908 IGHV3-43DP0DP04 118 aa0.78□□□□□ -2.28
CCDC93-209ENST00000488908 FUT1P19526 365 aa0.78□□□□□ -2.28
CCDC93-209ENST00000488908 NPR2P20594 1047 aa0.78□□□□□ -2.28
CCDC93-209ENST00000488908 IMPDH1P20839 514 aa0.78□□□□□ -2.28
CCDC93-209ENST00000488908 CNR1P21554 472 aa0.78□□□□□ -2.28
CCDC93-209ENST00000488908 IL12AP29459 219 aa0.78□□□□□ -2.28
CCDC93-209ENST00000488908 MAP3K8P41279 467 aa0.78□□□□□ -2.28
CCDC93-209ENST00000488908 CYB561P49447 251 aa0.78□□□□□ -2.28
CCDC93-209ENST00000488908 ACADVLP49748 655 aa0.78□□□□□ -2.28
CCDC93-209ENST00000488908 STARD6P59095 220 aa0.78□□□□□ -2.28
CCDC93-209ENST00000488908 RAP1AP62834 184 aa0.78□□□□□ -2.28
CCDC93-209ENST00000488908 ERVK-25P63136 954 aa0.78□□□□□ -2.28
CCDC93-209ENST00000488908 KLRC3Q07444 240 aa0.78□□□□□ -2.28
CCDC93-209ENST00000488908 NCBP1Q09161 790 aaKnown RBP0.78□□□□□ -2.28
CCDC93-209ENST00000488908 AP1B1Q10567 949 aa0.78□□□□□ -2.28
CCDC93-209ENST00000488908 ZBED5Q49AG3 693 aa0.78□□□□□ -2.28
CCDC93-209ENST00000488908 BEND3Q5T5X7 828 aa0.78□□□□□ -2.28
CCDC93-209ENST00000488908 OR52E8Q6IFG1 317 aa0.78□□□□□ -2.28
CCDC93-209ENST00000488908 ERASQ7Z444 233 aa0.78□□□□□ -2.28
CCDC93-209ENST00000488908 KIAA1328Q86T90 577 aa0.78□□□□□ -2.28
CCDC93-209ENST00000488908 BIVMQ86UB2 503 aa0.78□□□□□ -2.28
CCDC93-209ENST00000488908 ZNF546Q86UE3 836 aa0.78□□□□□ -2.28
CCDC93-209ENST00000488908 CCDC50Q8IVM0 306 aa0.78□□□□□ -2.28
CCDC93-209ENST00000488908 HDDC3Q8N4P3 179 aa0.78□□□□□ -2.28
CCDC93-209ENST00000488908 C15orf56Q8N910 161 aa0.78□□□□□ -2.28
CCDC93-209ENST00000488908 FNDC5Q8NAU1 212 aa0.78□□□□□ -2.28
CCDC93-209ENST00000488908 VN1R2Q8NFZ6 395 aa0.78□□□□□ -2.28
CCDC93-209ENST00000488908 CMTM7Q96FZ5 175 aa0.78□□□□□ -2.28
CCDC93-209ENST00000488908 AURKBQ96GD4 344 aaPredicted RBP0.78□□□□□ -2.28
CCDC93-209ENST00000488908 RIT2Q99578 217 aa0.78□□□□□ -2.28
CCDC93-209ENST00000488908 DOK1Q99704 481 aa0.78□□□□□ -2.28
CCDC93-209ENST00000488908 GPA33Q99795 319 aa0.78□□□□□ -2.28
CCDC93-209ENST00000488908 SULT4A1Q9BR01 284 aa0.78□□□□□ -2.28
CCDC93-209ENST00000488908 ACTR6Q9GZN1 396 aa0.78□□□□□ -2.28
CCDC93-209ENST00000488908 GBA3Q9H227 469 aa0.78□□□□□ -2.28
CCDC93-209ENST00000488908 RBKSQ9H477 322 aa0.78□□□□□ -2.28
CCDC93-209ENST00000488908 REEP4Q9H6H4 257 aa0.78□□□□□ -2.28
CCDC93-209ENST00000488908 POPDC2Q9HBU9 364 aa0.78□□□□□ -2.28
CCDC93-209ENST00000488908 HMG20AQ9NP66 347 aa0.78□□□□□ -2.28
CCDC93-209ENST00000488908 SIGLEC8Q9NYZ4 499 aa0.78□□□□□ -2.28
CCDC93-209ENST00000488908 TMCO1Q9UM00 188 aa0.78□□□□□ -2.28
CCDC93-209ENST00000488908 KNSTRNQ9Y448 316 aa0.78□□□□□ -2.28
CCDC93-209ENST00000488908 NFASCO94856 1347 aa0.78□□□□□ -2.28
CCDC93-209ENST00000488908 MN1Q10571 1320 aaPredicted RBP0.78□□□□□ -2.28
CCDC93-209ENST00000488908 SORL1Q92673 2214 aa0.77□□□□□ -2.29
CCDC93-209ENST00000488908 A0A1B0GVX0 72 aa0.77□□□□□ -2.29
CCDC93-209ENST00000488908 TMEM223A0PJW6 202 aa0.77□□□□□ -2.29
CCDC93-209ENST00000488908 PFKFB2O60825 505 aa0.77□□□□□ -2.29
CCDC93-209ENST00000488908 BCAS1O75363 584 aaPredicted RBP0.77□□□□□ -2.29
CCDC93-209ENST00000488908 DEDDO75618 318 aa0.77□□□□□ -2.29
CCDC93-209ENST00000488908 MFN2O95140 757 aa0.77□□□□□ -2.29
CCDC93-209ENST00000488908 IGHV1-8P0DP01 117 aa0.77□□□□□ -2.29
CCDC93-209ENST00000488908 NT5EP21589 574 aa0.77□□□□□ -2.29
CCDC93-209ENST00000488908 NAMPTP43490 491 aa0.77□□□□□ -2.29
CCDC93-209ENST00000488908 CX3CR1P49238 355 aa0.77□□□□□ -2.29
CCDC93-209ENST00000488908 FGF8P55075 233 aaPredicted RBP0.77□□□□□ -2.29
CCDC93-209ENST00000488908 RPS14P62263 151 aaKnown RBP0.77□□□□□ -2.29
CCDC93-209ENST00000488908 NUCB2P80303 420 aa0.77□□□□□ -2.29
CCDC93-209ENST00000488908 PDZK1IP1Q13113 114 aa0.77□□□□□ -2.29
CCDC93-209ENST00000488908 ERCC8Q13216 396 aa0.77□□□□□ -2.29
CCDC93-209ENST00000488908 PRPSAP1Q14558 356 aa0.77□□□□□ -2.29
CCDC93-209ENST00000488908 TATDN3Q17R31 274 aa0.77□□□□□ -2.29
CCDC93-209ENST00000488908 SLC25A52Q3SY17 297 aa0.77□□□□□ -2.29
CCDC93-209ENST00000488908 TMEM41BQ5BJD5 291 aa0.77□□□□□ -2.29
CCDC93-209ENST00000488908 TPGS2Q68CL5 300 aa0.77□□□□□ -2.29
CCDC93-209ENST00000488908 LCN12Q6JVE5 192 aa0.77□□□□□ -2.29
CCDC93-209ENST00000488908 PGAP1Q75T13 922 aa0.77□□□□□ -2.29
CCDC93-209ENST00000488908 GET4Q7L5D6 327 aaPredicted RBP0.77□□□□□ -2.29
CCDC93-209ENST00000488908 PEX26Q7Z412 305 aa0.77□□□□□ -2.29
CCDC93-209ENST00000488908 PLA2G4DQ86XP0 818 aa0.77□□□□□ -2.29
CCDC93-209ENST00000488908 CCDC65Q8IXS2 484 aa0.77□□□□□ -2.29
CCDC93-209ENST00000488908 SLC35F2Q8IXU6 374 aa0.77□□□□□ -2.29
CCDC93-209ENST00000488908 OR2L13Q8N349 312 aa0.77□□□□□ -2.29
CCDC93-209ENST00000488908 SPRYD4Q8WW59 207 aaPredicted RBP0.77□□□□□ -2.29
CCDC93-209ENST00000488908 ESR2Q92731 530 aa0.77□□□□□ -2.29
CCDC93-209ENST00000488908 EFHD2Q96C19 240 aaPredicted RBP0.77□□□□□ -2.29
CCDC93-209ENST00000488908 L3HYPDHQ96EM0 354 aa0.77□□□□□ -2.29
CCDC93-209ENST00000488908 TSSK3Q96PN8 268 aa0.77□□□□□ -2.29
CCDC93-209ENST00000488908 FAM111AQ96PZ2 611 aa0.77□□□□□ -2.29
CCDC93-209ENST00000488908 MRPL45Q9BRJ2 306 aaKnown RBP0.77□□□□□ -2.29
CCDC93-209ENST00000488908 ZNF416Q9BWM5 594 aa0.77□□□□□ -2.29
CCDC93-209ENST00000488908 DPH5Q9H2P9 285 aa0.77□□□□□ -2.29
CCDC93-209ENST00000488908 MRPL47Q9HD33 250 aaKnown RBP0.77□□□□□ -2.29
CCDC93-209ENST00000488908 SLCO1B3Q9NPD5 702 aa0.77□□□□□ -2.29
CCDC93-209ENST00000488908 SLC17A5Q9NRA2 495 aa0.77□□□□□ -2.29
CCDC93-209ENST00000488908 EXD2Q9NVH0 621 aa0.77□□□□□ -2.29
CCDC93-209ENST00000488908 XCL2Q9UBD3 114 aa0.77□□□□□ -2.29
CCDC93-209ENST00000488908 ZNF230Q9UIE0 474 aaPredicted RBP0.77□□□□□ -2.29
CCDC93-209ENST00000488908 HOOK1Q9UJC3 728 aaKnown RBP0.77□□□□□ -2.29
CCDC93-209ENST00000488908 S4R3C0 116 aa0.77□□□□□ -2.29
CCDC93-209ENST00000488908 KDRP35968 1356 aa0.77□□□□□ -2.29
CCDC93-209ENST00000488908 PTPRTO14522 1441 aa0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms