RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 SH3GLB1Q9Y371 365 aa11.3□□□□□ -0.6
HDAC1-209ENST00000484305 TRAPPC13A5PLN9 417 aa11.29□□□□□ -0.6
HDAC1-209ENST00000484305 OR6C65A6NJZ3 312 aa11.29□□□□□ -0.6
HDAC1-209ENST00000484305 FAM220BPB1ANY3 271 aa11.29□□□□□ -0.6
HDAC1-209ENST00000484305 TRAF3IP2O43734 574 aaPredicted RBP11.29□□□□□ -0.6
HDAC1-209ENST00000484305 CCDC22O60826 627 aa11.29□□□□□ -0.6
HDAC1-209ENST00000484305 SLC43A1O75387 559 aa11.29□□□□□ -0.6
HDAC1-209ENST00000484305 PAX1P15863 534 aa11.29□□□□□ -0.6
HDAC1-209ENST00000484305 CD40P25942 277 aa11.29□□□□□ -0.6
HDAC1-209ENST00000484305 CDH11P55287 796 aa11.29□□□□□ -0.6
HDAC1-209ENST00000484305 PRPS1P60891 318 aa11.29□□□□□ -0.6
HDAC1-209ENST00000484305 PMS2P3Q13401 168 aa11.29□□□□□ -0.6
HDAC1-209ENST00000484305 PRSS57Q6UWY2 283 aa11.29□□□□□ -0.6
HDAC1-209ENST00000484305 NHLRC1Q6VVB1 395 aa11.29□□□□□ -0.6
HDAC1-209ENST00000484305 YTHDF3Q7Z739 585 aaKnown RBP11.29□□□□□ -0.6
HDAC1-209ENST00000484305 CARM1Q86X55 608 aa11.29□□□□□ -0.6
HDAC1-209ENST00000484305 TREML1Q86YW5 311 aa11.29□□□□□ -0.6
HDAC1-209ENST00000484305 UEVLDQ8IX04 471 aa11.29□□□□□ -0.6
HDAC1-209ENST00000484305 SCAIQ8N9R8 606 aa11.29□□□□□ -0.6
HDAC1-209ENST00000484305 OR2T12Q8NG77 320 aa11.29□□□□□ -0.6
HDAC1-209ENST00000484305 OR1K1Q8NGR3 316 aa11.29□□□□□ -0.6
HDAC1-209ENST00000484305 TXNDC15Q96J42 360 aa11.29□□□□□ -0.6
HDAC1-209ENST00000484305 OR2M2Q96R28 347 aa11.29□□□□□ -0.6
HDAC1-209ENST00000484305 ELAC2Q9BQ52 826 aaKnown RBP11.29□□□□□ -0.6
HDAC1-209ENST00000484305 CXorf56Q9H5V9 222 aa11.29□□□□□ -0.6
HDAC1-209ENST00000484305 ZNF701Q9NV72 531 aaPredicted RBP11.29□□□□□ -0.6
HDAC1-209ENST00000484305 MRPL39Q9NYK5 338 aaKnown RBP11.29□□□□□ -0.6
HDAC1-209ENST00000484305 MGAT4BQ9UQ53 548 aa11.29□□□□□ -0.6
HDAC1-209ENST00000484305 CORINQ9Y5Q5 1042 aa11.29□□□□□ -0.6
HDAC1-209ENST00000484305 MAGED1Q9Y5V3 778 aaPredicted RBP11.29□□□□□ -0.6
HDAC1-209ENST00000484305 SETD2Q9BYW2 2564 aaPredicted RBP11.29□□□□□ -0.6
HDAC1-209ENST00000484305 E7EQL1 145 aa11.28□□□□□ -0.6
HDAC1-209ENST00000484305 OVOL3O00110 214 aa11.28□□□□□ -0.6
HDAC1-209ENST00000484305 PLPP3O14495 311 aa11.28□□□□□ -0.6
HDAC1-209ENST00000484305 SHOX2O60902 331 aaPredicted RBP11.28□□□□□ -0.6
HDAC1-209ENST00000484305 TMCC2O75069 709 aa11.28□□□□□ -0.6
HDAC1-209ENST00000484305 CH25HO95992 272 aa11.28□□□□□ -0.6
HDAC1-209ENST00000484305 MT-ATP6P00846 226 aa11.28□□□□□ -0.6
HDAC1-209ENST00000484305 CD8AP01732 235 aa11.28□□□□□ -0.6
HDAC1-209ENST00000484305 FOSL1P15407 271 aa11.28□□□□□ -0.6
HDAC1-209ENST00000484305 KDELR2P33947 212 aa11.28□□□□□ -0.6
HDAC1-209ENST00000484305 OR1E2P47887 323 aa11.28□□□□□ -0.6
HDAC1-209ENST00000484305 RPS4XP62701 263 aaKnown RBP11.28□□□□□ -0.6
HDAC1-209ENST00000484305 ROR2Q01974 943 aaKnown RBP11.28□□□□□ -0.6
HDAC1-209ENST00000484305 POU3F1Q03052 451 aaPredicted RBP11.28□□□□□ -0.6
HDAC1-209ENST00000484305 PUDPQ08623 228 aa11.28□□□□□ -0.6
HDAC1-209ENST00000484305 TBRG1Q3YBR2 411 aa11.28□□□□□ -0.6
HDAC1-209ENST00000484305 LRRC23Q53EV4 343 aaPredicted RBP11.28□□□□□ -0.6
HDAC1-209ENST00000484305 CYBRD1Q53TN4 286 aa11.28□□□□□ -0.6
HDAC1-209ENST00000484305 PHYHD1Q5SRE7 291 aa11.28□□□□□ -0.6
HDAC1-209ENST00000484305 HMBOX1Q6NT76 420 aa11.28□□□□□ -0.6
HDAC1-209ENST00000484305 TTC33Q6PID6 262 aaPredicted RBP11.28□□□□□ -0.6
HDAC1-209ENST00000484305 SLC22A25Q6T423 547 aa11.28□□□□□ -0.6
HDAC1-209ENST00000484305 SPATA21Q7Z572 469 aa11.28□□□□□ -0.6
HDAC1-209ENST00000484305 WDFY1Q8IWB7 410 aa11.28□□□□□ -0.6
HDAC1-209ENST00000484305 SLC15A3Q8IY34 581 aa11.28□□□□□ -0.6
HDAC1-209ENST00000484305 MICU2Q8IYU8 434 aa11.28□□□□□ -0.6
HDAC1-209ENST00000484305 TMEM123Q8N131 208 aa11.28□□□□□ -0.6
HDAC1-209ENST00000484305 BCL2L2Q92843 193 aaPredicted RBP11.28□□□□□ -0.6
HDAC1-209ENST00000484305 ZNF837Q96EG3 531 aaPredicted RBP11.28□□□□□ -0.6
HDAC1-209ENST00000484305 RADILQ96JH8 1075 aa11.28□□□□□ -0.6
HDAC1-209ENST00000484305 Q96MF0 132 aa11.28□□□□□ -0.6
HDAC1-209ENST00000484305 PRSS27Q9BQR3 290 aa11.28□□□□□ -0.6
HDAC1-209ENST00000484305 ZNF426Q9BUY5 554 aa11.28□□□□□ -0.6
HDAC1-209ENST00000484305 EMC6Q9BV81 110 aa11.28□□□□□ -0.6
HDAC1-209ENST00000484305 NELFAQ9H3P2 528 aa11.28□□□□□ -0.6
HDAC1-209ENST00000484305 GSX1Q9H4S2 264 aaPredicted RBP11.28□□□□□ -0.6
HDAC1-209ENST00000484305 GPR35Q9HC97 309 aa11.28□□□□□ -0.6
HDAC1-209ENST00000484305 MED29Q9NX70 200 aa11.28□□□□□ -0.6
HDAC1-209ENST00000484305 BAG5Q9UL15 447 aa11.28□□□□□ -0.6
HDAC1-209ENST00000484305 C2CD3Q4AC94 2353 aa11.28□□□□□ -0.6
HDAC1-209ENST00000484305 A0A096LPE4 126 aa11.27□□□□□ -0.61
HDAC1-209ENST00000484305 A0A1W2PPZ6 126 aa11.27□□□□□ -0.61
HDAC1-209ENST00000484305 ELOVL7A1L3X0 281 aa11.27□□□□□ -0.61
HDAC1-209ENST00000484305 RPL36A-HNRNPH2H7BZ11 118 aa11.27□□□□□ -0.61
HDAC1-209ENST00000484305 KPNA4O00629 521 aaPredicted RBP11.27□□□□□ -0.61
HDAC1-209ENST00000484305 WNT11O96014 354 aa11.27□□□□□ -0.61
HDAC1-209ENST00000484305 IFNA14P01570 189 aa11.27□□□□□ -0.61
HDAC1-209ENST00000484305 AHCYP23526 432 aa11.27□□□□□ -0.61
HDAC1-209ENST00000484305 CDKN1AP38936 164 aa11.27□□□□□ -0.61
HDAC1-209ENST00000484305 ATP5J2P56134 94 aa11.27□□□□□ -0.61
HDAC1-209ENST00000484305 ARF1P84077 181 aaKnown RBP11.27□□□□□ -0.61
HDAC1-209ENST00000484305 LIPEQ05469 1076 aa11.27□□□□□ -0.61
HDAC1-209ENST00000484305 ZNF74Q16587 644 aa11.27□□□□□ -0.61
HDAC1-209ENST00000484305 CARD17Q5XLA6 110 aa11.27□□□□□ -0.61
HDAC1-209ENST00000484305 ANKRD16Q6P6B7 361 aa11.27□□□□□ -0.61
HDAC1-209ENST00000484305 KLHL24Q6TFL4 600 aa11.27□□□□□ -0.61
HDAC1-209ENST00000484305 B3GLCTQ6Y288 498 aa11.27□□□□□ -0.61
HDAC1-209ENST00000484305 DEF8Q6ZN54 512 aa11.27□□□□□ -0.61
HDAC1-209ENST00000484305 NKAIN4Q8IVV8 208 aa11.27□□□□□ -0.61
HDAC1-209ENST00000484305 CIARTQ8N365 385 aaPredicted RBP11.27□□□□□ -0.61
HDAC1-209ENST00000484305 GPR137CQ8N3F9 429 aa11.27□□□□□ -0.61
HDAC1-209ENST00000484305 LRRC17Q8N6Y2 441 aa11.27□□□□□ -0.61
HDAC1-209ENST00000484305 PIK3C3Q8NEB9 887 aa11.27□□□□□ -0.61
HDAC1-209ENST00000484305 OR5J2Q8NH18 312 aa11.27□□□□□ -0.61
HDAC1-209ENST00000484305 TPD52L3Q96J77 140 aa11.27□□□□□ -0.61
HDAC1-209ENST00000484305 MPP4Q96JB8 637 aa11.27□□□□□ -0.61
HDAC1-209ENST00000484305 C18orf12Q96KH6 178 aa11.27□□□□□ -0.61
HDAC1-209ENST00000484305 SMR3AQ99954 134 aa11.27□□□□□ -0.61
HDAC1-209ENST00000484305 TRAF4Q9BUZ4 470 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms