RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 EFCAB11Q9BUY7 163 aa12.69□□□□□ -0.38
HDAC1-206ENST00000476391 HCAR1Q9BXC0 346 aa12.69□□□□□ -0.38
HDAC1-206ENST00000476391 MRPL37Q9BZE1 423 aaKnown RBP12.69□□□□□ -0.38
HDAC1-206ENST00000476391 FAM86C1Q9NVL1 165 aa12.69□□□□□ -0.38
HDAC1-206ENST00000476391 SLC35A3Q9Y2D2 325 aa12.69□□□□□ -0.38
HDAC1-206ENST00000476391 SLC27A6Q9Y2P4 619 aa12.69□□□□□ -0.38
HDAC1-206ENST00000476391 TEX13DA0A0J9YY54 714 aaPredicted RBP12.69□□□□□ -0.38
HDAC1-206ENST00000476391 hCG_1809904A0A1W2PP81 198 aa12.69□□□□□ -0.38
HDAC1-206ENST00000476391 A0A1W2PPH5 198 aa12.69□□□□□ -0.38
HDAC1-206ENST00000476391 A0A1W2PR64 198 aa12.69□□□□□ -0.38
HDAC1-206ENST00000476391 A0A1W2PRV1 198 aa12.69□□□□□ -0.38
HDAC1-206ENST00000476391 CPSF4LA6NMK7 179 aaKnown RBP12.69□□□□□ -0.38
HDAC1-206ENST00000476391 GPRIN2O60269 458 aa12.69□□□□□ -0.38
HDAC1-206ENST00000476391 IFNA2P01563 188 aa12.69□□□□□ -0.38
HDAC1-206ENST00000476391 GTF2F2P13984 249 aa12.69□□□□□ -0.38
HDAC1-206ENST00000476391 NDUFS1P28331 727 aa12.69□□□□□ -0.38
HDAC1-206ENST00000476391 CD34P28906 385 aa12.69□□□□□ -0.38
HDAC1-206ENST00000476391 ADCYAP1R1P41586 468 aa12.69□□□□□ -0.38
HDAC1-206ENST00000476391 PCP4P48539 62 aa12.69□□□□□ -0.38
HDAC1-206ENST00000476391 OR2B8PP59922 312 aa12.69□□□□□ -0.38
HDAC1-206ENST00000476391 SIRPAP78324 504 aa12.69□□□□□ -0.38
HDAC1-206ENST00000476391 SSBP1Q04837 148 aaKnown RBP12.69□□□□□ -0.38
HDAC1-206ENST00000476391 HSPB3Q12988 150 aa12.69□□□□□ -0.38
HDAC1-206ENST00000476391 ALG11Q2TAA5 492 aa12.69□□□□□ -0.38
HDAC1-206ENST00000476391 CDPF1Q6NVV7 123 aa12.69□□□□□ -0.38
HDAC1-206ENST00000476391 RPL22L1Q6P5R6 122 aaKnown RBP12.69□□□□□ -0.38
HDAC1-206ENST00000476391 CD300LGQ6UXG3 332 aa12.69□□□□□ -0.38
HDAC1-206ENST00000476391 LRRTM4Q86VH4 590 aa12.69□□□□□ -0.38
HDAC1-206ENST00000476391 PAQR4Q8N4S7 273 aaPredicted RBP12.69□□□□□ -0.38
HDAC1-206ENST00000476391 ZNF433Q8N7K0 673 aaPredicted RBP12.69□□□□□ -0.38
HDAC1-206ENST00000476391 OR52L1Q8NGH7 329 aa12.69□□□□□ -0.38
HDAC1-206ENST00000476391 OR56B1Q8NGI3 324 aa12.69□□□□□ -0.38
HDAC1-206ENST00000476391 NUBPLQ8TB37 319 aa12.69□□□□□ -0.38
HDAC1-206ENST00000476391 TMED6Q8WW62 240 aa12.69□□□□□ -0.38
HDAC1-206ENST00000476391 WDR34Q96EX3 536 aa12.69□□□□□ -0.38
HDAC1-206ENST00000476391 SULT4A1Q9BR01 284 aa12.69□□□□□ -0.38
HDAC1-206ENST00000476391 GPR62Q9BZJ7 368 aa12.69□□□□□ -0.38
HDAC1-206ENST00000476391 HRH4Q9H3N8 390 aa12.69□□□□□ -0.38
HDAC1-206ENST00000476391 WIF1Q9Y5W5 379 aa12.69□□□□□ -0.38
HDAC1-206ENST00000476391 IFITM10A6NMD0 228 aa12.68□□□□□ -0.38
HDAC1-206ENST00000476391 FAM157AC9JC47 383 aa12.68□□□□□ -0.38
HDAC1-206ENST00000476391 F2P00734 622 aa12.68□□□□□ -0.38
HDAC1-206ENST00000476391 OR4Q2P0C623 313 aa12.68□□□□□ -0.38
HDAC1-206ENST00000476391 MAS1LP35410 378 aa12.68□□□□□ -0.38
HDAC1-206ENST00000476391 FRKP42685 505 aaPredicted RBP12.68□□□□□ -0.38
HDAC1-206ENST00000476391 SLC16A1P53985 500 aa12.68□□□□□ -0.38
HDAC1-206ENST00000476391 CLDN12P56749 244 aa12.68□□□□□ -0.38
HDAC1-206ENST00000476391 ACTA2P62736 377 aa12.68□□□□□ -0.38
HDAC1-206ENST00000476391 ACTG2P63267 376 aa12.68□□□□□ -0.38
HDAC1-206ENST00000476391 AKIRIN2Q53H80 203 aa12.68□□□□□ -0.38
HDAC1-206ENST00000476391 LCTLQ6UWM7 567 aa12.68□□□□□ -0.38
HDAC1-206ENST00000476391 DHRS11Q6UWP2 260 aa12.68□□□□□ -0.38
HDAC1-206ENST00000476391 OR4K14Q8NGD5 310 aa12.68□□□□□ -0.38
HDAC1-206ENST00000476391 SLC35G5Q96KT7 338 aa12.68□□□□□ -0.38
HDAC1-206ENST00000476391 ARHGDIGQ99819 225 aa12.68□□□□□ -0.38
HDAC1-206ENST00000476391 METTL9Q9H1A3 318 aa12.68□□□□□ -0.38
HDAC1-206ENST00000476391 POT1Q9NUX5 634 aa12.68□□□□□ -0.38
HDAC1-206ENST00000476391 SLC13A4Q9UKG4 626 aa12.68□□□□□ -0.38
HDAC1-206ENST00000476391 GOLGB1Q14789 3259 aaKnown RBP12.68□□□□□ -0.38
HDAC1-206ENST00000476391 TBC1D3DA0A087WVF3 549 aa12.68□□□□□ -0.38
HDAC1-206ENST00000476391 TBC1D3IA0A087WXS9 549 aa12.68□□□□□ -0.38
HDAC1-206ENST00000476391 TBC1D3EA0A087X179 549 aa12.68□□□□□ -0.38
HDAC1-206ENST00000476391 TBC1D3KA0A087X1G2 549 aa12.68□□□□□ -0.38
HDAC1-206ENST00000476391 TRBV2A0A0J9YWF9 115 aa12.68□□□□□ -0.38
HDAC1-206ENST00000476391 C7orf77A4D0Y5 90 aa12.68□□□□□ -0.38
HDAC1-206ENST00000476391 TBC1D3FA6NER0 549 aaPredicted RBP12.68□□□□□ -0.38
HDAC1-206ENST00000476391 TBC1D3LB9A6J9 549 aa12.68□□□□□ -0.38
HDAC1-206ENST00000476391 BHLHE40O14503 412 aa12.68□□□□□ -0.38
HDAC1-206ENST00000476391 PIN1P1O15428 100 aa12.68□□□□□ -0.38
HDAC1-206ENST00000476391 FBXO24O75426 580 aa12.68□□□□□ -0.38
HDAC1-206ENST00000476391 YIF1AO95070 293 aa12.68□□□□□ -0.38
HDAC1-206ENST00000476391 PAPLNO95428 1278 aa12.68□□□□□ -0.38
HDAC1-206ENST00000476391 ZGLP1P0C6A0 271 aa12.68□□□□□ -0.38
HDAC1-206ENST00000476391 ITPKBP27987 946 aa12.68□□□□□ -0.38
HDAC1-206ENST00000476391 GSK3AP49840 483 aa12.68□□□□□ -0.38
HDAC1-206ENST00000476391 SCAND1P57086 179 aa12.68□□□□□ -0.38
HDAC1-206ENST00000476391 PCBP4P57723 403 aaKnown RBP12.68□□□□□ -0.38
HDAC1-206ENST00000476391 NUTF2P61970 127 aaKnown RBP12.68□□□□□ -0.38
HDAC1-206ENST00000476391 SLBPQ14493 270 aaKnown RBP eCLIP12.68□□□□□ -0.38
HDAC1-206ENST00000476391 RNF219Q5W0B1 726 aaPredicted RBP12.68□□□□□ -0.38
HDAC1-206ENST00000476391 TBC1D3CQ6IPX1 549 aa12.68□□□□□ -0.38
HDAC1-206ENST00000476391 CHST9Q7L1S5 443 aa12.68□□□□□ -0.38
HDAC1-206ENST00000476391 TBC1D3Q8IZP1 549 aaPredicted RBP12.68□□□□□ -0.38
HDAC1-206ENST00000476391 GALNT16Q8N428 558 aa12.68□□□□□ -0.38
HDAC1-206ENST00000476391 OR4K17Q8NGC6 315 aa12.68□□□□□ -0.38
HDAC1-206ENST00000476391 PELI1Q96FA3 418 aa12.68□□□□□ -0.38
HDAC1-206ENST00000476391 GAS2L1Q99501 681 aaPredicted RBP12.68□□□□□ -0.38
HDAC1-206ENST00000476391 MICU1Q9BPX6 476 aa12.68□□□□□ -0.38
HDAC1-206ENST00000476391 POTEKPQ9BYX7 375 aa12.68□□□□□ -0.38
HDAC1-206ENST00000476391 SLITRK2Q9H156 845 aa12.68□□□□□ -0.38
HDAC1-206ENST00000476391 OR52D1Q9H346 318 aa12.68□□□□□ -0.38
HDAC1-206ENST00000476391 TRPV4Q9HBA0 871 aa12.68□□□□□ -0.38
HDAC1-206ENST00000476391 CMC2Q9NRP2 79 aa12.68□□□□□ -0.38
HDAC1-206ENST00000476391 NCDNQ9UBB6 729 aa12.68□□□□□ -0.38
HDAC1-206ENST00000476391 TRPC4Q9UBN4 977 aa12.68□□□□□ -0.38
HDAC1-206ENST00000476391 STMND1H3BQB6 276 aa12.67□□□□□ -0.38
HDAC1-206ENST00000476391 CDC42EP2O14613 210 aa12.67□□□□□ -0.38
HDAC1-206ENST00000476391 NTN1O95631 604 aa12.67□□□□□ -0.38
HDAC1-206ENST00000476391 FCGR3AP08637 254 aa12.67□□□□□ -0.38
HDAC1-206ENST00000476391 IMPA1P29218 277 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 148.8 ms