RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 C3orf30Q96M34 536 aa4.4□□□□□ -1.71
SNRNP40-204ENST00000474025 PRPF18Q99633 342 aaKnown RBP4.4□□□□□ -1.71
SNRNP40-204ENST00000474025 DUSP26Q9BV47 211 aa4.4□□□□□ -1.71
SNRNP40-204ENST00000474025 MRPL37Q9BZE1 423 aaKnown RBP4.4□□□□□ -1.71
SNRNP40-204ENST00000474025 SLC38A1Q9H2H9 487 aa4.4□□□□□ -1.71
SNRNP40-204ENST00000474025 SRA1Q9HD15 236 aaKnown RBP4.4□□□□□ -1.71
SNRNP40-204ENST00000474025 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.4□□□□□ -1.71
SNRNP40-204ENST00000474025 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.4□□□□□ -1.71
SNRNP40-204ENST00000474025 ZNF275Q9NSD4 429 aaPredicted RBP4.4□□□□□ -1.71
SNRNP40-204ENST00000474025 ADPRHL2Q9NX46 363 aa4.4□□□□□ -1.71
SNRNP40-204ENST00000474025 REV1Q9UBZ9 1251 aa4.4□□□□□ -1.71
SNRNP40-204ENST00000474025 A0A0G2JMP0 313 aa4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 A0A0X1KG70 313 aa4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 CFAP73A6NFT4 308 aa4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 AGAP5A6NIR3 686 aa4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 J3QLI3 93 aa4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 HMGN4O00479 90 aa4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 PPIHO43447 177 aaKnown RBP4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 TRIM13O60858 407 aa4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 SCN2BO60939 215 aa4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 FZD7O75084 574 aa4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 NPIPB7O75200 414 aa4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 DEAF1O75398 565 aaPredicted RBP4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 SEC14L2O76054 403 aa4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 MPZL1O95297 269 aa4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 BCL10O95999 233 aa4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 FSHBP01225 129 aa4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 C1QCP02747 245 aa4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 RPLP1P05386 114 aaKnown RBP4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 GSNP06396 782 aa4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 CHRM4P08173 479 aa4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 G6PDP11413 515 aa4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 ZNF35P13682 527 aa4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 UQCRBP14927 111 aa4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 RPS4Y1P22090 263 aaKnown RBP4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 NR4A1P22736 598 aa4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 CXCR1P25024 350 aa4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 ARRB2P32121 409 aa4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 ARR3P36575 388 aa4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 CCT5P48643 541 aa4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 SEC24CP53992 1094 aa4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 HPCAP84074 193 aa4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 MYBPC1Q00872 1141 aa4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 FOXL1Q12952 345 aa4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 BNIP2Q12982 314 aa4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 MAD2L1BPQ15013 274 aaPredicted RBP4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 SYPL1Q16563 259 aa4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 PGS1Q32NB8 556 aa4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 C11orf91Q3C1V1 193 aa4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 GPAT3Q53EU6 434 aa4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 MRPL2Q5T653 305 aaKnown RBP4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 TMEM225Q6GV28 225 aa4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 TRMT10CQ7L0Y3 403 aaKnown RBP4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 LRP11Q86VZ4 500 aa4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 ANKRD46Q86W74 232 aa4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 ALDH16A1Q8IZ83 802 aa4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 C17orf53Q8N3J3 647 aaPredicted RBP4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 BPIFB2Q8N4F0 458 aa4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 ANKFN1Q8N957 763 aa4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 OR4M2Q8NGB6 313 aa4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 OR8J2Q8NGG1 315 aa4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 OR4A15Q8NGL6 344 aa4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 AGR3Q8TD06 166 aa4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 C22orf15Q8WYQ4 148 aa4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 DVL3Q92997 716 aaPredicted RBP4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 NEURL3Q96EH8 262 aa4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 HSH2DQ96JZ2 352 aa4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 TRNT1Q96Q11 434 aaKnown RBP4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 SYT3Q9BQG1 590 aa4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 ZNF416Q9BWM5 594 aa4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 TAPBPLQ9BX59 468 aa4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 TXLNGYQ9BZA5 131 aa4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 MS4A5Q9H3V2 200 aa4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 ZNF665Q9H7R5 613 aa4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 GRPEL1Q9HAV7 217 aa4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 CRLF2Q9HC73 371 aa4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 GPR35Q9HC97 309 aa4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 SLC52A3Q9NQ40 469 aa4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 B3GNT2Q9NY97 397 aa4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 MYEF2Q9P2K5 600 aaKnown RBP4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 B3GAT1Q9P2W7 334 aa4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 OPN4Q9UHM6 478 aa4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 RCE1Q9Y256 329 aa4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 RASD1Q9Y272 281 aa4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 PPIAL4AQ9Y536 164 aa4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 CORINQ9Y5Q5 1042 aa4.39□□□□□ -1.71
SNRNP40-204ENST00000474025 COL7A1Q02388 2944 aa4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 PRSS51A0A1B0GVH4 220 aa4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 A8MVM7 634 aa4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 ZNF99A8MXY4 864 aaPredicted RBP4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 FTCDNL1E5RQL4 147 aa4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 COPEO14579 308 aa4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 TPD52L2O43399 206 aaKnown RBP4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 PLPP2O43688 288 aa4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 TRAF3IP2O43734 574 aaPredicted RBP4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 NPHS1O60500 1241 aa4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 PRSS23O95084 383 aa4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 IGHV2-5P01817 119 aa4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 HLA-HP01893 362 aa4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 TFPTP0C1Z6 253 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms