RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	STEAP2	Q8NFT2	490 aa		11.22	□□□□□ -0.61
FDPS-204	ENST00000461507	HIST1H2AC	Q93077	130 aa		11.22	□□□□□ -0.61
FDPS-204	ENST00000461507	FNDC11	Q9BVV2	318 aa		11.22	□□□□□ -0.61
FDPS-204	ENST00000461507	ZNF701	Q9NV72	531 aa	Predicted RBP	11.22	□□□□□ -0.61
FDPS-204	ENST00000461507	PARPBP	Q9NWS1	579 aa		11.22	□□□□□ -0.61
FDPS-204	ENST00000461507	MAGEL2	Q9UJ55	1249 aa		11.22	□□□□□ -0.61
FDPS-204	ENST00000461507	RIMS3	Q9UJD0	308 aa		11.22	□□□□□ -0.61
FDPS-204	ENST00000461507	SAMD4A	Q9UPU9	718 aa	Known RBP	11.22	□□□□□ -0.61
FDPS-204	ENST00000461507	RASD1	Q9Y272	281 aa		11.22	□□□□□ -0.61
FDPS-204	ENST00000461507	FLVCR1	Q9Y5Y0	555 aa		11.22	□□□□□ -0.61
FDPS-204	ENST00000461507	FAM171A2	A8MVW0	826 aa		11.21	□□□□□ -0.61
FDPS-204	ENST00000461507	C11orf98	E9PRG8	122 aa		11.21	□□□□□ -0.61
FDPS-204	ENST00000461507		J3KTA2	159 aa		11.21	□□□□□ -0.61
FDPS-204	ENST00000461507	RAD51D	O75771	328 aa		11.21	□□□□□ -0.61
FDPS-204	ENST00000461507	VAMP5	O95183	116 aa		11.21	□□□□□ -0.61
FDPS-204	ENST00000461507	OR5F1	O95221	314 aa		11.21	□□□□□ -0.61
FDPS-204	ENST00000461507	STAMBP	O95630	424 aa		11.21	□□□□□ -0.61
FDPS-204	ENST00000461507	HEXA	P06865	529 aa		11.21	□□□□□ -0.61
FDPS-204	ENST00000461507	EDNRA	P25101	427 aa		11.21	□□□□□ -0.61
FDPS-204	ENST00000461507	SLC16A1	P53985	500 aa		11.21	□□□□□ -0.61
FDPS-204	ENST00000461507	CLDN17	P56750	224 aa		11.21	□□□□□ -0.61
FDPS-204	ENST00000461507	H3F3A	P84243	136 aa		11.21	□□□□□ -0.61
FDPS-204	ENST00000461507	LTB	Q06643	244 aa		11.21	□□□□□ -0.61
FDPS-204	ENST00000461507	MFSD13A	Q14CX5	517 aa		11.21	□□□□□ -0.61
FDPS-204	ENST00000461507	CARD17	Q5XLA6	110 aa		11.21	□□□□□ -0.61
FDPS-204	ENST00000461507	WDR88	Q6ZMY6	472 aa		11.21	□□□□□ -0.61
FDPS-204	ENST00000461507	RINL	Q6ZS11	566 aa		11.21	□□□□□ -0.61
FDPS-204	ENST00000461507		Q6ZT83	130 aa		11.21	□□□□□ -0.61
FDPS-204	ENST00000461507	H1FNT	Q75WM6	255 aa	Predicted RBP	11.21	□□□□□ -0.61
FDPS-204	ENST00000461507	BHLHA15	Q7RTS1	189 aa	Predicted RBP	11.21	□□□□□ -0.61
FDPS-204	ENST00000461507	TRPM8	Q7Z2W7	1104 aa		11.21	□□□□□ -0.61
FDPS-204	ENST00000461507	NANOGNB	Q7Z5D8	188 aa		11.21	□□□□□ -0.61
FDPS-204	ENST00000461507	TSPYL5	Q86VY4	417 aa	Predicted RBP	11.21	□□□□□ -0.61
FDPS-204	ENST00000461507	NKAIN4	Q8IVV8	208 aa		11.21	□□□□□ -0.61
FDPS-204	ENST00000461507	UEVLD	Q8IX04	471 aa		11.21	□□□□□ -0.61
FDPS-204	ENST00000461507	ZNF611	Q8N823	705 aa		11.21	□□□□□ -0.61
FDPS-204	ENST00000461507	PFN4	Q8NHR9	129 aa		11.21	□□□□□ -0.61
FDPS-204	ENST00000461507	TMEM255B	Q8WV15	326 aa		11.21	□□□□□ -0.61
FDPS-204	ENST00000461507	S100PBP	Q96BU1	408 aa		11.21	□□□□□ -0.61
FDPS-204	ENST00000461507	MPP4	Q96JB8	637 aa		11.21	□□□□□ -0.61
FDPS-204	ENST00000461507	PRRC1	Q96M27	445 aa		11.21	□□□□□ -0.61
FDPS-204	ENST00000461507	NSMCE2	Q96MF7	247 aa		11.21	□□□□□ -0.61
FDPS-204	ENST00000461507	MOGAT1	Q96PD6	335 aa		11.21	□□□□□ -0.61
FDPS-204	ENST00000461507	ZNF385A	Q96PM9	386 aa	Known RBP	11.21	□□□□□ -0.61
FDPS-204	ENST00000461507	SMR3A	Q99954	134 aa		11.21	□□□□□ -0.61
FDPS-204	ENST00000461507	USB1	Q9BQ65	265 aa	Known RBP	11.21	□□□□□ -0.61
FDPS-204	ENST00000461507	TMEM43	Q9BTV4	400 aa		11.21	□□□□□ -0.61
FDPS-204	ENST00000461507	SF3B5	Q9BWJ5	86 aa	Known RBP	11.21	□□□□□ -0.61
FDPS-204	ENST00000461507	HDHD5	Q9BXW7	423 aa		11.21	□□□□□ -0.61
FDPS-204	ENST00000461507	PCDHAC1	Q9H158	963 aa		11.21	□□□□□ -0.61
FDPS-204	ENST00000461507	ASB6	Q9NWX5	421 aa		11.21	□□□□□ -0.61
FDPS-204	ENST00000461507	FAM32A	Q9Y421	112 aa	Known RBP	11.21	□□□□□ -0.61
FDPS-204	ENST00000461507	CORIN	Q9Y5Q5	1042 aa		11.21	□□□□□ -0.61
FDPS-204	ENST00000461507	SNX13	Q9Y5W8	968 aa		11.21	□□□□□ -0.61
FDPS-204	ENST00000461507	CSPG4	Q6UVK1	2322 aa		11.21	□□□□□ -0.62
FDPS-204	ENST00000461507	PLCE1	Q9P212	2302 aa		11.2	□□□□□ -0.62
FDPS-204	ENST00000461507	FTCDNL1	E5RQL4	147 aa		11.2	□□□□□ -0.62
FDPS-204	ENST00000461507	hCG_2039718	K7EN88	272 aa		11.2	□□□□□ -0.62
FDPS-204	ENST00000461507	HS3ST1	O14792	307 aa		11.2	□□□□□ -0.62
FDPS-204	ENST00000461507	ARPC2	O15144	300 aa		11.2	□□□□□ -0.62
FDPS-204	ENST00000461507	AKAP8	O43823	692 aa	Known RBP	11.2	□□□□□ -0.62
FDPS-204	ENST00000461507	PDE5A	O76074	875 aa		11.2	□□□□□ -0.62
FDPS-204	ENST00000461507	BGLAP	P02818	100 aa		11.2	□□□□□ -0.62
FDPS-204	ENST00000461507	THY1	P04216	161 aa		11.2	□□□□□ -0.62
FDPS-204	ENST00000461507	ADORA3	P0DMS8	318 aa		11.2	□□□□□ -0.62
FDPS-204	ENST00000461507	PTH2R	P49190	550 aa		11.2	□□□□□ -0.62
FDPS-204	ENST00000461507	POU3F1	Q03052	451 aa	Predicted RBP	11.2	□□□□□ -0.62
FDPS-204	ENST00000461507	ST3GAL3	Q11203	375 aa		11.2	□□□□□ -0.62
FDPS-204	ENST00000461507	ITGAD	Q13349	1161 aa		11.2	□□□□□ -0.62
FDPS-204	ENST00000461507	P2RY6	Q15077	328 aa		11.2	□□□□□ -0.62
FDPS-204	ENST00000461507	SFRP5	Q5T4F7	317 aa		11.2	□□□□□ -0.62
FDPS-204	ENST00000461507	FBXW9	Q5XUX1	488 aa		11.2	□□□□□ -0.62
FDPS-204	ENST00000461507	CYP2R1	Q6VVX0	501 aa		11.2	□□□□□ -0.62
FDPS-204	ENST00000461507	YTHDF3	Q7Z739	585 aa	Known RBP	11.2	□□□□□ -0.62
FDPS-204	ENST00000461507	TMEM239	Q8WW34	195 aa		11.2	□□□□□ -0.62
FDPS-204	ENST00000461507	MCUR1	Q96AQ8	359 aa		11.2	□□□□□ -0.62
FDPS-204	ENST00000461507	CCDC124	Q96CT7	223 aa	Known RBP	11.2	□□□□□ -0.62
FDPS-204	ENST00000461507	PLPPR2	Q96GM1	343 aa		11.2	□□□□□ -0.62
FDPS-204	ENST00000461507		Q96MF0	132 aa		11.2	□□□□□ -0.62
FDPS-204	ENST00000461507	AMBRA1	Q9C0C7	1298 aa		11.2	□□□□□ -0.62
FDPS-204	ENST00000461507	POLR2J2	Q9GZM3	115 aa	Known RBP	11.2	□□□□□ -0.62
FDPS-204	ENST00000461507	POLR2J3	Q9H1A7	115 aa	Known RBP	11.2	□□□□□ -0.62
FDPS-204	ENST00000461507	NANS	Q9NR45	359 aa		11.2	□□□□□ -0.62
FDPS-204	ENST00000461507	MED31	Q9Y3C7	131 aa		11.2	□□□□□ -0.62
FDPS-204	ENST00000461507	ZAN	Q9Y493	2812 aa		11.19	□□□□□ -0.62
FDPS-204	ENST00000461507	RNF13	O43567	381 aa		11.19	□□□□□ -0.62
FDPS-204	ENST00000461507	PIP5K1C	O60331	668 aa		11.19	□□□□□ -0.62
FDPS-204	ENST00000461507	UBOX5	O94941	541 aa		11.19	□□□□□ -0.62
FDPS-204	ENST00000461507	PLAU	P00749	431 aa		11.19	□□□□□ -0.62
FDPS-204	ENST00000461507	MT-ATP6	P00846	226 aa		11.19	□□□□□ -0.62
FDPS-204	ENST00000461507	HSD17B1	P14061	328 aa		11.19	□□□□□ -0.62
FDPS-204	ENST00000461507	COX5A	P20674	150 aa		11.19	□□□□□ -0.62
FDPS-204	ENST00000461507	IGHV1-2	P23083	117 aa		11.19	□□□□□ -0.62
FDPS-204	ENST00000461507	SELENOP	P49908	381 aa		11.19	□□□□□ -0.62
FDPS-204	ENST00000461507	UGT2B15	P54855	530 aa		11.19	□□□□□ -0.62
FDPS-204	ENST00000461507	PUDP	Q08623	228 aa		11.19	□□□□□ -0.62
FDPS-204	ENST00000461507	TAB1	Q15750	504 aa		11.19	□□□□□ -0.62
FDPS-204	ENST00000461507	FGD3	Q5JSP0	725 aa		11.19	□□□□□ -0.62
FDPS-204	ENST00000461507	TSPO2	Q5TGU0	170 aa		11.19	□□□□□ -0.62
FDPS-204	ENST00000461507	ZNF730	Q6ZMV8	503 aa		11.19	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 73 ms