RNA–Protein interactions for RNA: ENST00000453121.1

NEGR1-IT1-201, NEGR1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene NEGR1-IT1, Length 534 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEGR1-IT1-201ENST00000453121 HMGCS1Q01581 520 aa3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 IRF8Q02556 426 aa3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 LIPEQ05469 1076 aa3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 RBPJQ06330 500 aa3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 ACSM1Q08AH1 577 aa3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 CHIT1Q13231 466 aa3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 RUNX3Q13761 415 aa3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 CAPRIN1Q14444 709 aaKnown RBP3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 LRRC36Q1X8D7 754 aa3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 POM121L1PQ3SYA9 428 aa3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 TMEM52BQ4KMG9 183 aa3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 PAGE3Q5JUK9 113 aa3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 C9orf64Q5T6V5 341 aa3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 C1orf185Q5T7R7 199 aa3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 FAM219BQ5XKK7 198 aa3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 CAPN13Q6MZZ7 669 aaPredicted RBP3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 SLC25A47Q6Q0C1 308 aa3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 TMEM220Q6QAJ8 160 aa3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 MSANTD1Q6ZTZ1 278 aa3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 NCCRP1Q6ZVX7 275 aaPredicted RBP3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 ERN2Q76MJ5 926 aaKnown RBP3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 COMTD1Q86VU5 262 aa3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 THOC6Q86W42 341 aaKnown RBP3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 HOGA1Q86XE5 327 aa3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 TRAPPC5Q8IUR0 188 aa3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 SLC22A15Q8IZD6 547 aa3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 PACRGLQ8N7B6 248 aa3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 ZNF614Q8N883 585 aa3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 ANKFN1Q8N957 763 aa3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 RASGEF1AQ8N9B8 481 aa3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 MAPK1IP1LQ8NDC0 245 aa3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 VN1R2Q8NFZ6 395 aa3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 OR4K1Q8NGD4 311 aa3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 OR1L3Q8NH93 324 aa3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 FGF13Q92913 245 aa3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 VPS33AQ96AX1 596 aa3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 CMTM7Q96FZ5 175 aa3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 MED8Q96G25 268 aa3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 ITCHQ96J02 903 aa3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 SLC45A3Q96JT2 553 aa3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 FAM71F1Q96KD3 344 aaPredicted RBP3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 TEX37Q96LM6 180 aa3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 NSMCE2Q96MF7 247 aa3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 CCDC115Q96NT0 180 aa3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 HBEGFQ99075 208 aa3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 CGREF1Q99674 301 aa3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 PKP2Q99959 881 aa3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 CENPKQ9BS16 269 aa3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 C9orf16Q9BUW7 83 aa3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 TMEM245Q9H330 911 aa3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 DPEP2Q9H4A9 486 aa3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 CLMPQ9H6B4 373 aa3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 UCK1Q9HA47 277 aa3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 CDH20Q9HBT6 801 aa3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 POLE3Q9NRF9 147 aa3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 SLC35D1Q9NTN3 355 aa3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 ARMC1Q9NVT9 282 aa3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 CMTM6Q9NX76 183 aa3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 OR6C2Q9NZP2 312 aa3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 STOX2Q9P2F5 926 aaPredicted RBP3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 CDH7Q9ULB5 785 aa3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 AURKCQ9UQB9 309 aa3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 SLC22A14Q9Y267 594 aa3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 RNF11Q9Y3C5 154 aa3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 CCL27Q9Y4X3 112 aa3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 RNF215Q9Y6U7 377 aa3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 ANKRD12Q6UB98 2062 aa3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 COL4A2P08572 1712 aa3.39□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 DNAH12Q6ZR08 3092 aa3.38□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 BPTFQ12830 3046 aa3.38□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 A0A096LPI6 279 aa3.38□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 RNF103-CHMP3A0A140T963 221 aa3.38□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 NDUFAF8A1L188 74 aa3.38□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 A4D1N5 150 aa3.38□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 E7EQ34 232 aa3.38□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 PGRMC2O15173 223 aa3.38□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 CASC3O15234 703 aaKnown RBP3.38□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 DENRO43583 198 aaKnown RBP3.38□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 RECQL5O94762 991 aaPredicted RBP3.38□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 OR5F1O95221 314 aa3.38□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 TNFAIP8O95379 198 aa3.38□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 C1orf105O95561 183 aa3.38□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 DUS4LO95620 317 aaKnown RBP3.38□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 CLDN1O95832 211 aa3.38□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 ECDO95905 644 aaPredicted RBP3.38□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 TBX6O95947 436 aaPredicted RBP3.38□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 SOD1P00441 154 aa3.38□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 PCCBP05166 539 aa3.38□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 LYNP07948 512 aa3.38□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 SAGP10523 405 aaPredicted RBP3.38□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 PRKAR1AP10644 381 aa3.38□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 BCKDHAP12694 445 aa3.38□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 PSMC3P17980 439 aa3.38□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 SDC1P18827 310 aa3.38□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 EPORP19235 508 aa3.38□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 GGT1P19440 569 aa3.38□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 PRPS1L1P21108 318 aa3.38□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 ACHEP22303 614 aa3.38□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 GALP22466 123 aa3.38□□□□□ -1.87
NEGR1-IT1-201ENST00000453121 CD27P26842 260 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms