RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 C1GALT1C1Q96EU7 318 aa4.01□□□□□ -1.77
SDCBP-205ENST00000447267 SNF8Q96H20 258 aa4.01□□□□□ -1.77
SDCBP-205ENST00000447267 OR5M11Q96RB7 305 aa4.01□□□□□ -1.77
SDCBP-205ENST00000447267 TSC22D3Q99576 134 aa4.01□□□□□ -1.77
SDCBP-205ENST00000447267 CCT7Q99832 543 aa4.01□□□□□ -1.77
SDCBP-205ENST00000447267 TM2D3Q9BRN9 247 aa4.01□□□□□ -1.77
SDCBP-205ENST00000447267 KATNB1Q9BVA0 655 aa4.01□□□□□ -1.77
SDCBP-205ENST00000447267 ST6GALNAC5Q9BVH7 336 aa4.01□□□□□ -1.77
SDCBP-205ENST00000447267 PRSS22Q9GZN4 317 aa4.01□□□□□ -1.77
SDCBP-205ENST00000447267 NSRP1Q9H0G5 558 aaKnown RBP4.01□□□□□ -1.77
SDCBP-205ENST00000447267 ISCUQ9H1K1 167 aa4.01□□□□□ -1.77
SDCBP-205ENST00000447267 DPAGT1Q9H3H5 408 aa4.01□□□□□ -1.77
SDCBP-205ENST00000447267 ZNF442Q9H7R0 627 aa4.01□□□□□ -1.77
SDCBP-205ENST00000447267 LYRM4Q9HD34 91 aa4.01□□□□□ -1.77
SDCBP-205ENST00000447267 MRGBPQ9NV56 204 aa4.01□□□□□ -1.77
SDCBP-205ENST00000447267 FKBP14Q9NWM8 211 aa4.01□□□□□ -1.77
SDCBP-205ENST00000447267 PAQR5Q9NXK6 330 aaPredicted RBP4.01□□□□□ -1.77
SDCBP-205ENST00000447267 DDX56Q9NY93 547 aaKnown RBP4.01□□□□□ -1.77
SDCBP-205ENST00000447267 TRMT6Q9UJA5 497 aaKnown RBP4.01□□□□□ -1.77
SDCBP-205ENST00000447267 PYCARDQ9ULZ3 195 aa4.01□□□□□ -1.77
SDCBP-205ENST00000447267 TMCO1Q9UM00 188 aa4.01□□□□□ -1.77
SDCBP-205ENST00000447267 VDAC3Q9Y277 283 aa4.01□□□□□ -1.77
SDCBP-205ENST00000447267 AMDHD2Q9Y303 409 aa4.01□□□□□ -1.77
SDCBP-205ENST00000447267 AAR2Q9Y312 384 aaKnown RBP4.01□□□□□ -1.77
SDCBP-205ENST00000447267 VPS13DQ5THJ4 4388 aa4□□□□□ -1.77
SDCBP-205ENST00000447267 DNAH2Q9P225 4427 aa4□□□□□ -1.77
SDCBP-205ENST00000447267 FAT2Q9NYQ8 4349 aa4□□□□□ -1.77
SDCBP-205ENST00000447267 ARPC4-TTLL3A0A0A6YYG9 625 aa4□□□□□ -1.77
SDCBP-205ENST00000447267 IGHV1-69-2A0A0G2JMI3 117 aa4□□□□□ -1.77
SDCBP-205ENST00000447267 A0A1B0GVG6 124 aa4□□□□□ -1.77
SDCBP-205ENST00000447267 CLDN25C9JDP6 229 aa4□□□□□ -1.77
SDCBP-205ENST00000447267 AKR1B15C9JRZ8 316 aaPredicted RBP4□□□□□ -1.77
SDCBP-205ENST00000447267 H3BUI4 141 aa4□□□□□ -1.77
SDCBP-205ENST00000447267 RTCAO00442 366 aaKnown RBP4□□□□□ -1.77
SDCBP-205ENST00000447267 CCNT2O60583 730 aaKnown RBP4□□□□□ -1.77
SDCBP-205ENST00000447267 NME6O75414 186 aaPredicted RBP4□□□□□ -1.77
SDCBP-205ENST00000447267 CDK2AP2O75956 126 aa4□□□□□ -1.77
SDCBP-205ENST00000447267 PROSCO94903 275 aa4□□□□□ -1.77
SDCBP-205ENST00000447267 KRT14P02533 472 aa4□□□□□ -1.77
SDCBP-205ENST00000447267 OPN1SWP03999 348 aa4□□□□□ -1.77
SDCBP-205ENST00000447267 GRPP07492 148 aa4□□□□□ -1.77
SDCBP-205ENST00000447267 PPIAL4GP0DN37 164 aa4□□□□□ -1.77
SDCBP-205ENST00000447267 CPN2P22792 545 aa4□□□□□ -1.77
SDCBP-205ENST00000447267 CCND1P24385 295 aa4□□□□□ -1.77
SDCBP-205ENST00000447267 FPR3P25089 353 aa4□□□□□ -1.77
SDCBP-205ENST00000447267 RBL1P28749 1068 aa4□□□□□ -1.77
SDCBP-205ENST00000447267 HPDP32754 393 aaPredicted RBP4□□□□□ -1.77
SDCBP-205ENST00000447267 CRYBB2P43320 205 aa4□□□□□ -1.77
SDCBP-205ENST00000447267 NR2C2P49116 596 aa4□□□□□ -1.77
SDCBP-205ENST00000447267 FNTAP49354 379 aa4□□□□□ -1.77
SDCBP-205ENST00000447267 PGGT1BP53609 377 aa4□□□□□ -1.77
SDCBP-205ENST00000447267 UCP3P55916 312 aa4□□□□□ -1.77
SDCBP-205ENST00000447267 FGF12P61328 243 aa4□□□□□ -1.77
SDCBP-205ENST00000447267 STXBP1P61764 594 aaKnown RBP4□□□□□ -1.77
SDCBP-205ENST00000447267 PAX2Q02962 417 aa4□□□□□ -1.77
SDCBP-205ENST00000447267 LCP2Q13094 533 aa4□□□□□ -1.77
SDCBP-205ENST00000447267 CUL1Q13616 776 aa4□□□□□ -1.77
SDCBP-205ENST00000447267 HFEQ30201 348 aa4□□□□□ -1.77
SDCBP-205ENST00000447267 CEP85LQ5SZL2 805 aa4□□□□□ -1.77
SDCBP-205ENST00000447267 PDSS1Q5T2R2 415 aa4□□□□□ -1.77
SDCBP-205ENST00000447267 ARMC4Q5T2S8 1044 aa4□□□□□ -1.77
SDCBP-205ENST00000447267 REP15Q6BDI9 236 aa4□□□□□ -1.77
SDCBP-205ENST00000447267 NXNQ6DKJ4 435 aa4□□□□□ -1.77
SDCBP-205ENST00000447267 SFRP4Q6FHJ7 346 aaPredicted RBP4□□□□□ -1.77
SDCBP-205ENST00000447267 ITPRIPL1Q6GPH6 555 aa4□□□□□ -1.77
SDCBP-205ENST00000447267 KCTD18Q6PI47 426 aaPredicted RBP4□□□□□ -1.77
SDCBP-205ENST00000447267 AGTRAPQ6RW13 159 aa4□□□□□ -1.77
SDCBP-205ENST00000447267 LRRC6Q86X45 466 aa4□□□□□ -1.77
SDCBP-205ENST00000447267 PDZD9Q8IXQ8 264 aa4□□□□□ -1.77
SDCBP-205ENST00000447267 ZNF101Q8IZC7 436 aa4□□□□□ -1.77
SDCBP-205ENST00000447267 ST13P4Q8IZP2 240 aaPredicted RBP4□□□□□ -1.77
SDCBP-205ENST00000447267 KIRREL3Q8IZU9 778 aa4□□□□□ -1.77
SDCBP-205ENST00000447267 TBC1D19Q8N5T2 526 aa4□□□□□ -1.77
SDCBP-205ENST00000447267 PRELID2Q8N945 189 aa4□□□□□ -1.77
SDCBP-205ENST00000447267 OR2T6Q8NHC8 308 aa4□□□□□ -1.77
SDCBP-205ENST00000447267 CCL17Q92583 94 aa4□□□□□ -1.77
SDCBP-205ENST00000447267 NEIL2Q969S2 332 aa4□□□□□ -1.77
SDCBP-205ENST00000447267 DNAJA3Q96EY1 480 aa4□□□□□ -1.77
SDCBP-205ENST00000447267 TIMD4Q96H15 378 aa4□□□□□ -1.77
SDCBP-205ENST00000447267 TSNARE1Q96NA8 513 aa4□□□□□ -1.77
SDCBP-205ENST00000447267 MOGAT1Q96PD6 335 aa4□□□□□ -1.77
SDCBP-205ENST00000447267 RBM14Q96PK6 669 aaKnown RBP4□□□□□ -1.77
SDCBP-205ENST00000447267 ZNF347Q96SE7 839 aa4□□□□□ -1.77
SDCBP-205ENST00000447267 ITPAQ9BY32 194 aa4□□□□□ -1.77
SDCBP-205ENST00000447267 KRTAP2-2Q9BYT5 123 aa4□□□□□ -1.77
SDCBP-205ENST00000447267 GPR61Q9BZJ8 451 aa4□□□□□ -1.77
SDCBP-205ENST00000447267 SEMA6AQ9H2E6 1030 aa4□□□□□ -1.77
SDCBP-205ENST00000447267 TAB2Q9NYJ8 693 aa4□□□□□ -1.77
SDCBP-205ENST00000447267 IL20Q9NYY1 176 aa4□□□□□ -1.77
SDCBP-205ENST00000447267 FLRT3Q9NZU0 649 aa4□□□□□ -1.77
SDCBP-205ENST00000447267 SELENONQ9NZV5 590 aa4□□□□□ -1.77
SDCBP-205ENST00000447267 LIMA1Q9UHB6 759 aaKnown RBP4□□□□□ -1.77
SDCBP-205ENST00000447267 VPREB3Q9UKI3 123 aa4□□□□□ -1.77
SDCBP-205ENST00000447267 RIMKLBQ9ULI2 386 aa4□□□□□ -1.77
SDCBP-205ENST00000447267 ABCG2Q9UNQ0 655 aa4□□□□□ -1.77
SDCBP-205ENST00000447267 CMAHPQ9Y471 501 aa4□□□□□ -1.77
SDCBP-205ENST00000447267 APOBP04114 4563 aaKnown RBP4□□□□□ -1.77
SDCBP-205ENST00000447267 CENPVL3A0A0U1RRI6 287 aa3.99□□□□□ -1.77
SDCBP-205ENST00000447267 HTR3EA5X5Y0 456 aa3.99□□□□□ -1.77
SDCBP-205ENST00000447267 GLOD5A6NK44 160 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms